Natural selection on Plasmodium surface proteins
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Kemp, 1987, Repetitive genes and proteins of malaria, Annu. Rev. Microbiol., 41, 181, 10.1146/annurev.mi.41.100187.001145
Anders, 1988, Antigens with repeated amino acid sequences from the asexual blood stages of Plasmodium falciparum, Prog. Allergy, 41, 148
de la Cruz, 1987, Evolution of the immunodominant domain of the circumsporozoite protein gene from Plasmodium vivax: implications for vaccines, J. Biol. Chem., 262, 6464, 10.1016/S0021-9258(18)48264-6
Hughes, 1991, Circumsporozoite protein genes of malaria parasites (Plasmodium spp.): evidence for positive selection on immunogenic regions, Genetics, 127, 345, 10.1093/genetics/127.2.345
Jongwutiwes, 1995, Allelic variation in the circumsporozoite protein of Plasmodium falciparum from Thai field isolates, Amer. J. Trop. Med. Hyg., 51, 659, 10.4269/ajtmh.1994.51.659
Hughes, 1988, Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection, Nature, 335, 167, 10.1038/335167a0
Robson, 1988, A highly conserved amino-acid sequence in thrombospondin, properdin and in proteins from sporozoites and blood stages of a human malaria parasite, Nature, 335, 79, 10.1038/335079a0
Rogers, 1992, Characterization of Plasmodium falciparum sporozoite surface protein 2, 89, 9176
Smythe, 1988, Identification of two integral membrane proteins of Plasmodium falciparum, 85, 5195
Peterson, 1989, Integral membrane protein located in the apical complex of Plasmodium falciparum, Mol. Cell. Biol., 9, 3151, 10.1128/MCB.9.7.3151
Thomas, 1990, Analysis of variation in PF83, an erythrocytic merozoite vaccine candidate antigen of Plasmodium falciparum, Mol. Biochem. Parasitol., 42, 285, 10.1016/0166-6851(90)90172-I
Fidock, 1994, Plasmodium falciparum liver stage antigen-1 is well conserved and contains potent B and T cell determinants, J. Immunol., 154, 190, 10.4049/jimmunol.153.1.190
Pologe, 1987, Primary structure and subcellular localization of the knob-associated histidine-rich protein of Plasmodium falciparum, 84, 7139
Favoloro, 1986, Structure of the RESA gene of Plasmodium falciparum, Nucleic Acids Res., 14, 8265, 10.1093/nar/14.21.8265
Cowman, 1985, Conserved sequences flank variable tandem repeats in two S-antigen genes of Plasmodium falciparum, Cell, 40, 775, 10.1016/0092-8674(85)90337-X
Hughes, 1992, Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum, Mol. Biol. Evol., 9, 381
Nardin, 1993, T cell responses to preerythrocytic stages of malaria: role in protection and vaccine development against pre-erythrocytic stages, Annu. Rev. Immunol., 11, 687, 10.1146/annurev.iy.11.040193.003351
Thomas, 1990, Sequence comparison of allelic forms of the Plasmodium falciparum merozoite surface antigen MSA2, Mol. Biochem. Parasitol., 43, 211, 10.1016/0166-6851(90)90146-D
Smythe, 1990, Structural diversity in the 45-kilodalton merozoite surface antigen of Plasmodium falciparum, Mol. Biochem. Parasitol., 39, 227, 10.1016/0166-6851(90)90061-P
Jones, 1991, Immunological fine structure of the variable and constant regions of a polymorphic malarial surface antigen from Plasmodium falciparum, Mol. Biochem. Parasitol., 48, 1, 10.1016/0166-6851(91)90158-3
Hill, 1992, Molecular analysis of the association of HLA-B53 and resistance to severe malaria, Nature, 360, 434, 10.1038/360434a0
Triglia, 1987, The complete sequence of the gene for the knob-associated histidine-rich protein from Plasmodium falciparum, EMBO J., 6, 1413, 10.1002/j.1460-2075.1987.tb02382.x
Cowman, 1984, The ring-infected erythrocyte surface antigen (RESA) polypeptide of Plasmodium falciparum contains two separate blocks of tandem repeats encoding antigenic epitopes that are naturally immunogenic in man, Mol. Biol. Med., 2, 207
Coppel, 1983, Isolate-specific S-antigen of Plasmodium falciparum contains a repeated sequence of eleven amino acids, Nature, 306, 751, 10.1038/306751a0
Brown, 1987, Sequence variation in the S-antigen genes of Plasmodium falciparum, Mol. Biol. Med., 4, 365
Bickle, 1993, The S-antigen of Plasmodium falciparum: repertoire and origin of diversity, Mol. Biochem. Parasitol., 61, 189, 10.1016/0166-6851(93)90065-6
Higgins, 1992, CLUSTAL V: improved software for multiple sequence alignment, Comput. Appl. Biosci., 8, 189
Nei, 1986, Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions, Mol. Biol. Evol., 4, 406
Hughes, 1990, Positive Darwinian selection promotes charge profile diversity in the antigenbinding cleft of class I major-histocompatibility-complex molecules, Mol. Biol. Evol., 7, 515
Saitou, 1987, The neighbor-joining method: a new method for reconstructing phylogenetic trees, Mol. Biol. Evol., 4, 406
Saitou, 1989, Relative efficiencies of the Fitch-Margoliash, maximum-parsimony, maximum-likelihood, minimum-evolution, and neighbor-joining methods of phylogenetic tree construction in obtaining the correct tree, Mol. Biol. Evol., 6, 514
Jukes, 1969, Evolution of protein molecules, 21
Good, 1988, Human T-cell recognition of the circumsporozoite protein of Plasmodium falciparum: immunodominant T-cell domains map to the polymorphic regions of the molecule, 85, 1199
Romero, 1989, Cloned cytotoxic T cells recognize an epitope in the circumsporozoite protein and protect against malaria, Nature, 341, 323, 10.1038/341323a0
Weiss, 1990, Cytotoxic T cells recognize a peptide from the circumsporozoite protein on malaria-infected hepatocytes, J. Exp. Med., 171, 763, 10.1084/jem.171.3.763
Herrera, 1992, Human recognition of T cell epitopes on the Plasmudium vivax circumsporozoite protein, J. Immunol., 148, 3986, 10.4049/jimmunol.148.12.3986
Marshall, 1991, A Plasmodium falciparum MSA-2 gene apparently generated by intragenic recombination between the two allelic families, Mol. Biochem. Parasitol., 45, 349, 10.1016/0166-6851(91)90104-E
Rzepczyk, 1989, Analysis of human T cell response to two Plasmodium falciparum merozoite surface antigens, Eur. J. Immunol., 19, 1797, 10.1002/eji.1830191006
Ellis, 1987, Structure and expression of the knob-associated histidine-rich protein of Plasmodium falciparum, Mol. Biochem. Parasitol., 26, 203, 10.1016/0166-6851(87)90144-7
Weber, 1988, A review: molecular biology of malaria parasites, Exp. Parasitol., 66, 143, 10.1016/0014-4894(88)90087-2
Goldman, 1993, Circumsporozoite protein gene of Plasmodium simium, a Plasmodium vivax-like monkey malaria parasite, Mol. Biochem. Parasitol., 57, 177, 10.1016/0166-6851(93)90257-X
Deane, 1966, A naturally acquired human infection by Plasmodium simium of howler monkeys, Trans. R. Soc. Trop. Med. Hyg., 60, 563, 10.1016/0035-9203(66)90288-4
Nei, 1987
Doolan, 1991, Location of human cytotoxic T cell epitopes within a polymorphic domain of the Plasmodium falciparum circumsporozoite protein, Int. Immunol., 3, 511, 10.1093/intimm/3.6.511
McCutchan, 1992, Two types of sequence polymorphism in the circumsporozoite gene of Plasmodium falciparum, Mol. Biochem. Parasitol., 50, 37, 10.1016/0166-6851(92)90242-C
Garrett, 1989, Specificity pockets for the side chains of peptide antigens in HLA-Aw68, Nature, 342, 692, 10.1038/342692a0
Escalante, 1994, Phylogeny of the malarial genus Plasmodium, derived from rRNA gene sequences, 91, 11373
Waters, 1991, Plasmodium falciparum appears to have arisen as a result of lateral transfer between avian and human hosts, 88, 3140
Hughes, 1991, Coevolution of immunogenic proteins of Plasmodium falciparum and the host's immune system, 109
Nei, 1989, Variances of the average numbers of synonymous and nonsynonymous nucleotide substitution within and between populations, Mol. Biol. Evol., 6, 418
Rzhetsky, 1992, A simple method for estimating and testing minimum-evolution trees, Mol. Biol. Evol., 9, 945