The L530R variation associated with recurrent kidney stones impairs the structure and function of TRPV5

Biochemical and Biophysical Research Communications - Tập 492 - Trang 362-367 - 2017
Lingyun Wang1, Ross P. Holmes2, Ji-Bin Peng1,2
1Division of Nephrology, Department of Medicine, Nephrology Research and Training Center, University of Alabama at Birmingham, Birmingham, AL 35294, USA
2Department of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, USA

Tài liệu tham khảo

Hoenderop, 1999, Molecular identification of the apical Ca2+ channel in 1,25-dihydroxyvitamin D-3-responsive epithelia, J. Biol. Chem., 274, 8375, 10.1074/jbc.274.13.8375 Hoenderop, 2003, Renal Ca2+ wasting, hyperabsorption, and reduced bone thickness in mice lacking TRPV5, J. Clin. Invest., 112, 1906, 10.1172/JCI200319826 Na, 2014, TRPV5: a Ca2+ channel for the fine-tuning of Ca2+ reabsorption, Handb. Exp. Pharmacol., 222, 321, 10.1007/978-3-642-54215-2_13 van Abel, 2005, The epithelial calcium channels TRPV5 and TRPV6: regulation and implication for disease, Naunyn Schmiedeb. Arch. Pharmacol., 371, 295, 10.1007/s00210-005-1021-2 Akey, 2004, Population history and natural selection shape patterns of genetic variation in 132 genes, PLoS Biol., 2, 1591, 10.1371/journal.pbio.0020286 Na, 2009, The A563T cariation of the renal epithelial calcium channel TRPV5 among African Americans enhances calcium influx, Am. J. Physiol. Ren. Physiol., 296, 1042, 10.1152/ajprenal.90771.2008 Wang, 2016, Molecular modeling of the structural and dynamical changes in calcium channel TRPV5 induced by the African-specific A563T variation, Biochemistry, 55, 1254, 10.1021/acs.biochem.5b00732 Khaleel, 2015, A single nucleotide polymorphism (rs4236408) in TRPV5 calcium channel gene is associated with stone multiplicity in calcium nephrolithiasis patients, Mediat. Inflamm., 2015, 10.1155/2015/375427 Oddsson, 2015, Common and rare variants associated with kidney stones and biochemical traits, Nat. Commun., 6, 7975, 10.1038/ncomms8975 Saotome, 2016, Crystal structure of the epithelial calcium channel TRPV6, Nature, 534, 506, 10.1038/nature17975 Peng, 1999, Molecular cloning and characterization of a channel-like transporter mediating interstinal calcium absorption, J. Biol. Chem., 274, 22739, 10.1074/jbc.274.32.22739 Peng, 2011, TRPV5 and TRPV6 in transcellular Ca2+ transport: regulation, gene duplication, and polymorphisms in african populations, Adv. Exp. Med. Biol., 704, 239, 10.1007/978-94-007-0265-3_14 Jiang, 2008, WNK4 regulates the secretory pathway via which TRPV5 is targeted to the plasma membrane, Biochem. Biophy. Res. Comm., 375, 225, 10.1016/j.bbrc.2008.08.010 Sali, 1993, Comparative protein modeling by satisfaction of spatial restraints, J. Mol. Biol., 234, 779, 10.1006/jmbi.1993.1626 Forrest, 2006, On the accuracy of homology modeling and sequence alignment methods applied to membrane proteins, Biophys. J., 91, 508, 10.1529/biophysj.106.082313 The PyMOL, Molecular Graphics System, Version 1.5.0.4 Schrödinger, LLC. Jo, 2009, CHARMM-gui membrane builder for mixed bilayers and its application to yeast membranes, Biophys. J., 97, 50, 10.1016/j.bpj.2009.04.013 Hornak, 2006, Comparison of multiple amber force fields and development of improved protein backbone parameters, Proteins, 65, 712, 10.1002/prot.21123 Dickson, 2014, Lipid14: the amber lipid force field, J. Chem. Theory Comput., 10, 865, 10.1021/ct4010307 Case, 2014 Fancy, 2014, Characterization of calmodulin-fas death domain interaction: an integrated experimental and computational studyrated experimental and computational study, Biochemistry, 53, 2680, 10.1021/bi500228h Wang, 2017, Phosphorylation of KLHL3 at serine 433 impairs its interaction with the acidic motif of WNK4: a molecular dynamics study, Protein Sci., 26, 163, 10.1002/pro.3063 Fancy, 2016, Characterization of the interactions between calmodulin and death receptor 5 in triple-negative and estrogen receptor positive breast cancer cells: an integrated experimental and computational study, J. Biol. Chem., 291, 12862, 10.1074/jbc.M116.727727 Wang, 2017, Activation mechanisms of αVβ3 integrin by binding to fibronectin: a computational study, Protein Sci., 26, 1124, 10.1002/pro.3163 Wang, 2014, Molecular insight for the effect of lipid bilayer environments on thrombospondin-1 and calreticulin interactions, Biochemistry, 53, 6309, 10.1021/bi500662v Kabsch, 1983, Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features, Biopolymers, 22, 2577, 10.1002/bip.360221211 Baker, 2001, Electrostatics of nanosystems: application to microtubules and the ribosome, Proc. Natl. Acad. Sci. U. S. A., 98, 10037, 10.1073/pnas.181342398 Humphrey, 1996, VMD: visual molecular dynamics, J. Mol. Graph. Modell., 14, 33, 10.1016/0263-7855(96)00018-5 Li, 2010, Dominant conformation of valsartan in sodium dodecyl sulfate micelle environment, J. Phys. Chem. B, 114, 2719, 10.1021/jp908958k Vembar, 2008, One step at a time: endoplasmic reticulum-associated degradation, Nat. Rev. Mol. Cell Biol., 9, 944, 10.1038/nrm2546 Loh, 2013, Autosomal dominant hypercalciuria in a mouse model due to a mutation of the epithelial calcium channel, TRPV5, PLoS One, 8, e55412, 10.1371/journal.pone.0055412 Renkema, 2009, The calcium-sensing receptor promotes urinary acidification to prevent nephrolithiasis, J. Am. Soc. Nephrol., 20, 1705, 10.1681/ASN.2008111195