Rôle du laboratoire d’anatomie pathologique dans l’approche pré-analytique des examens de biologie moléculaire réalisés en pathologie tumorale
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Hewitt, 2008, Tissue handling and specimen preparation in surgical pathology: issues concerning the recovery of nucleic acids from formalin-fixed, paraffin-embedded tissue, Arch Pathol Lab Med, 132, 1929, 10.5858/132.12.1929
Mies, 1994, Molecular biological analysis of paraffin-embedded tissues, Hum Pathol, 555, 10.1016/0046-8177(94)90218-6
Votavova, 2009, Optimized protocol for gene expression analysis in formalin-fixed, paraffin-embedded tissue using real-time quantitative polymerase chain reaction, Diagn Mol Pathol, 18, 176, 10.1097/PDM.0b013e31818d1091
Hofman, 2007, Les microARNs : le point de vue du pathologiste en 2007, Ann Pathol, 27, S46, 10.1016/S0242-6498(07)92856-4
Ioro, 2009, MicroRNAs in cancer: small molecules with a huge impact, J Clin Oncol, 27, 5848, 10.1200/JCO.2009.24.0317
Ortholan, 2009, MicroRNAs and lung cancer: new oncogenes and tumor suppressors, new prognostic factors and potential therapeutic targets, Curr Med Chem, 16, 1047, 10.2174/092986709787581833
Siebolts, 2009, Tissues from routine pathology archives are suitable for microRNA analyses by quantitative PCR, J Clin Pathol, 62, 84, 10.1136/jcp.2008.058339
Xi, 2007, Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fixed paraffin-embedded samples, RNA, 13, 1668, 10.1261/rna.642907
Burford-Mason, 1994, Detection of proliferating cell nuclear antigen in paraffin-embedded specimens is dependent on preembedding tissue handling and fixation, Arch Pathol Lab Med, 118, 1007
Pauletti, 2000, Assessment of methods for tissue-based detection of the HER-2/neu alteration in human breast cancer: a direct comparison of fluorescence in situ hybridization and immunohistochemistry, J Clin Oncol, 18, 3651, 10.1200/JCO.2000.18.21.3651
Cataloluk, 2003, Formalin fixing and paraffin embedding may lead to extra band development in PCR, New Microbiol, 26, 193
McKinney, 2009, Detection of viral RNA from paraffin-embedded tissues after prolonged formalin fixation, J Clin Virol, 44, 39, 10.1016/j.jcv.2008.09.003
Hofman, 2003, P. Value of PCR amplification from formalin-fixed paraffin-embedded tissues in the diagnosis of Mycobacterium tuberculosis infection, Ann Pathol, 23, 206
Lassalle, 2006, Sarcoid-like lesions associated with the immune restoration inflammatory syndrome in AIDS: absence of polymerase chain reaction detection of Mycobacterium tuberculosis in granulomas isolated by laser capture microdissection, Virchows Arch, 449, 689, 10.1007/s00428-006-0278-2
Selva, 2004, The value of polymerase chain reaction detection of Mycobacterium tuberculosis in granulomas isolated by laser capture microdissection, Pathology, 36, 77, 10.1080/00313020310001644516
Bussolati, 2008, Tissue transfer to pathology labs: under vacuum is the safe alternative to formalin, Virchows Arch, 452, 229, 10.1007/s00428-007-0529-x
Plénat, 2006, Conséquence moléculaires de la fixation et utilisation des tissues : l’example des acides nucléiques et des protéines, Ann Pathol, 26, 8, 10.1016/S0242-6498(06)70655-1
Koshiba, 1993, The effect of formalin fixation on DNA and the extraction of high molecular-weight DNA from fixed and embedded tissues, Pathol Res Pract, 189, 66, 10.1016/S0344-0338(11)80118-4
Becker, 2007, Quantitative protein analysis from formalin-fixed tissues: implications for translational clinical research and nanoscale molecular diagnosis, J Pathol, 211, 370, 10.1002/path.2107
Grizzle WE. Special symposium: fixation and tissue processing models. Biotech Histochem 200;84:185–93.
Goldstein, 2003, Minimum formalin fixation time for consistent estrogen receptor immunohistochemical staining of invasive breast carcinoma, Am J Clin Pathol, 120, 86, 10.1309/QPHDRB00QXGMUQ9N
Paska, 2004, Effect of formalin, acetone, and RNA later fixatives on tissue preservation and different size amplicons by real time PCR from paraffin-embedded tissue, Diagn Mol Pathol, 13, 234, 10.1097/01.pdm.0000134778.37729.9f
http://www.legifrance.gouv.fr/Article R231-56-3. Abrogé par décret no 2008-244 du 7 mars 2008-art.9 (V).
IARC working group on the evaluation of carcinogenic risks to humans formaldehyde, 2-butoxyethanol and 1-tert-butoxypropan-2-ol. IARC Monogr Eval Carcinog Risks Hum 2006;88:1–478.
Bostwick, 1994, Establishment of the formalin-free surgical pathology laboratory Utility of an alcohol-based fixative, Arch Pathol Lab Med, 118, 298
Nogushi, 1997, Modified formalin and methanol fixation methods for molecular biological and morphological analyses, Pathol Int, 47, 685, 10.1111/j.1440-1827.1997.tb04442.x
Srinivasan, 2002, Effect of fixatives and tissue processing on the content and integrity of nucleic acids, Am J Pathol, 161, 1961, 10.1016/S0002-9440(10)64472-0
Titford, 2005, Histomorphologic assessment of formalin substitute fixatives for diagnostic surgical pathology, Arch Pathol Lab Med, 129, 502, 10.5858/2005-129-502-HAOFSF
Umlas, 2004, The effects of glyoxal fixation on the histological evaluation of breast specimens, Hum Pathol, 35, 1058, 10.1016/j.humpath.2004.04.013
Vincek, 2003, A tissue fixative that protects macromolecules (DNA RNA, and protein) and histomorphology in clinical samples, Lab Invest, 83, 1427, 10.1097/01.LAB.0000090154.55436.D1
Weiss, 1991, Effects of different fixatives on detection of nucleic acids from paraffin-embedded tissues by in situ hybridization using oligonucleotide probes, J Histochem Cytochem, 39, 1237, 10.1177/39.9.1918942
Wiedorn, 2002, HOPE--a new fixing technique enables preservation and extraction of high molecular weight DNA and RNA of > 20kb from paraffin-embedded tissues Hepes-Glutamic acid buffer mediated organic solvent protection effect, Pathol Res Pract, 198, 735, 10.1078/0344-0338-00329
Hofman, 2009, Quels fixateurs ? Pour quelles indications ? Principaux critères d’évaluation des méthodes alternatives à la fixation par le formol, Rev Fr Lab, 408, 45
Le Guellec, 2009, Les nouveaux fixateurs tissulaires, Rev Fr Lab, 408, 425
Stanta, 2006, A novel fixative improves opportunities of nucleic acids and proteomic analysis in human archive's tissues, Diagn Mol Pathol, 15, 115, 10.1097/00019606-200606000-00009
Willmore-Payne, 2007, Effects of fixative and fixation protocols on assessment of Her-2/neu oncogene amplification status by fluorescence in situ hybridization, Appl Immunohistochem Mol Morphol, 15, 84, 10.1097/01.pai.0000209866.20581.8e
Cox, 2006, Assessment of fixatives, fixation, and tissue processing on morphology and RNA integrity, Exp Mol Pathol, 80, 183, 10.1016/j.yexmp.2005.10.002
Esteban, 1991, Effects of various fixatives and fixation conditions on DNA ploidy analysis: a need for strict internal DNA standards, Am J Clin Pathol, 95, 460, 10.1093/ajcp/95.4.460
Gillespie, 2002, Evaluation of non-formalin tissue fixation for molecular profiling studies, Am J Pathol, 160, 449, 10.1016/S0002-9440(10)64864-X
Lassalle, 2009, Assessment of morphology, antigenicity, and nucleic acid integrity for diagnostic thyroid pathology using formalin substitue fixatives, Thyroid, 19, 1239, 10.1089/thy.2009.0095
Dillon, 2005, Detection of Ki-ras and p53 mutations by laser capture microdissection/PCR/SSCP, Methods Mol Biol, 293, 57
Donati, 2009, Laser capture microdissection: a tool for the molecular characterization of histologic subtypes of lung adenocarcinoma, Int J Mol Med, 24, 473
Fuiki, 2008, Prospective study of te haccuracy of EGFR mutational analysis by high-resolution melting analysis in small samples obtained from patients with non-small cell lung cancer, Clin Cancer Res, 14, 4751, 10.1158/1078-0432.CCR-07-5207
Benchekroun, 2004, Impact of fixative on recovery of mRNA from paraffin-embedded tissue, Diagn Mol Pathol, 13, 116, 10.1097/00019606-200406000-00008
Jacobs, 1996, Loss of tumor marker-immunostaining intensity on stored paraffin slides of breast cancer, J Natl Cancer Inst, 88, 1054, 10.1093/jnci/88.15.1054
Jewell, 2002, Analysis of the molecular quality of human tissues: an experience from the Cooperative Human Tissue Network, Am J Clin Pathol, 118, 733, 10.1309/VPQL-RT21-X7YH-XDXK
Hofman, 2010, Les biobanques en France : enjeux et contraintes, Rev Fr Lab, 418, 55