Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo

Journal of Experimental Medicine - Tập 210 Số 12 - Trang 2641-2659 - 2013
Omar Abdel‐Wahab1,2,3,4,5, Jie Gao6,7, Mazhar Adli8, Anwesha Dey9,10,11, Thomas Trimarchi6,7, Young Rock Chung1,2,3,5, Cem Kuscu8, Todd Hricik1,2,3,5, Delphine Ndiaye‐Lobry6,7, Lindsay M. LaFave1,2,3,5, Richard P. Koche12,13,14, Alan H. Shih1,2,3,5, Olga A. Guryanova1,2,3,5, Eun Hee Kim1,2,3,5, Sheng Li15,16, Suveg Pandey1,2,3,5, Joseph Shin1,2,3,5, Leon Telis1,2,3,5, Jinfeng Liu9,10,11, Parva Bhatt1,2,3,5, Sébastien Monette17, Xinyang Zhao18, Christopher E. Mason15,16, Christopher Y. Park1,2,3,5, B Bernstein12,13,14, Iannis Aifantis6,7, Ross L. Levine19,20
1Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 1 , 2 , 3 , and 4
2Gerstner Sloan-Kettering Graduate School of Biomedical Sciences 1 , 2 , 3 , and 4
3Human Oncology and Pathogenesis Program 1 , 2 , 3 , and 4
4Human Oncology and Pathogenesis Program, 2 Leukemia Service, 3 Gerstner Sloan-Kettering Graduate School of Biomedical Sciences, and 4 Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
5Leukemia Service 1 , 2 , 3 , and 4
6Department of Pathology, New York University School of Medicine, New York, NY 10016 5 and 6
7Howard Hughes Medical Institute 5 and 6
8Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908 7
9Department of Bioinformatics and Computational Biology, Genentech, South San Francisco, CA 94080 11 and 12
10Department of Molecular Biology 11 and 12
11Genentech, Inc.
12Broad Institute of MIT and Harvard, Cambridge, MA 02142 8
13Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114 9 and 10
14Howard Hughes Medical Institute 9 and 10
15Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10065 13 and 14
16Graduate School of Medical Sciences 13 and 14
17Tri-Institutional Laboratory of Comparative Pathology, Memorial Sloan-Kettering Cancer Center, Weill Cornell Medical College, and The Rockefeller University, New York, NY 10065 15
18Department of Biochemistry and Molecular Genetics, University of Alabama, Birmingham, AL 35294 16
19(Cornell University
20Memorial Sloan Kettering Cancer Center

Tóm tắt

Somatic Addition of Sex Combs Like 1 (ASXL1) mutations occur in 10–30% of patients with myeloid malignancies, most commonly in myelodysplastic syndromes (MDSs), and are associated with adverse outcome. Germline ASXL1 mutations occur in patients with Bohring-Opitz syndrome. Here, we show that constitutive loss of Asxl1 results in developmental abnormalities, including anophthalmia, microcephaly, cleft palates, and mandibular malformations. In contrast, hematopoietic-specific deletion of Asxl1 results in progressive, multilineage cytopenias and dysplasia in the context of increased numbers of hematopoietic stem/progenitor cells, characteristic features of human MDS. Serial transplantation of Asxl1-null hematopoietic cells results in a lethal myeloid disorder at a shorter latency than primary Asxl1 knockout (KO) mice. Asxl1 deletion reduces hematopoietic stem cell self-renewal, which is restored by concomitant deletion of Tet2, a gene commonly co-mutated with ASXL1 in MDS patients. Moreover, compound Asxl1/Tet2 deletion results in an MDS phenotype with hastened death compared with single-gene KO mice. Asxl1 loss results in a global reduction of H3K27 trimethylation and dysregulated expression of known regulators of hematopoiesis. RNA-Seq/ChIP-Seq analyses of Asxl1 in hematopoietic cells identify a subset of differentially expressed genes as direct targets of Asxl1. These findings underscore the importance of Asxl1 in Polycomb group function, development, and hematopoiesis.

Từ khóa


Tài liệu tham khảo

Abdel-Wahab, 2012, ASXL1 mutations promote myeloid transformation through loss of PRC2-mediated gene repression, Cancer Cell., 22, 180, 10.1016/j.ccr.2012.06.032

Bejar, 2011, Clinical effect of point mutations in myelodysplastic syndromes, N. Engl. J. Med., 364, 2496, 10.1056/NEJMoa1013343

Bejar, 2012, Validation of a prognostic model and the impact of mutations in patients with lower-risk myelodysplastic syndromes, J. Clin. Oncol., 30, 3376, 10.1200/JCO.2011.40.7379

Boultwood, 2010, Frequent mutation of the polycomb-associated gene ASXL1 in the myelodysplastic syndromes and in acute myeloid leukemia, Leukemia., 24, 1062, 10.1038/leu.2010.20

Bracken, 2007, The Polycomb group proteins bind throughout the INK4A-ARF locus and are disassociated in senescent cells, Genes Dev., 21, 525, 10.1101/gad.415507

Choi, 2008, Impaired differentiation and apoptosis of hematopoietic precursors in a mouse model of myelodysplastic syndrome, Haematologica., 93, 1394, 10.3324/haematol.13042

de Pontual, 2011, Germline deletion of the miR-17∼92 cluster causes skeletal and growth defects in humans, Nat. Genet., 43, 1026, 10.1038/ng.915

Dey, 2012, Loss of the tumor suppressor BAP1 causes myeloid transformation, Science., 337, 1541, 10.1126/science.1221711

Fisher, 2010, Additional sex combs-like 1 belongs to the enhancer of trithorax and polycomb group and genetically interacts with Cbx2 in mice, Dev. Biol., 337, 9, 10.1016/j.ydbio.2009.10.004

Fisher, 2010, Loss-of-function Additional sex combs like 1 mutations disrupt hematopoiesis but do not cause severe myelodysplasia or leukemia, Blood., 115, 38, 10.1182/blood-2009-07-230698

Gelsi-Boyer, 2009, Mutations of polycomb-associated gene ASXL1 in myelodysplastic syndromes and chronic myelomonocytic leukaemia, Br. J. Haematol., 145, 788, 10.1111/j.1365-2141.2009.07697.x

Gilliland, 2001, The diverse role of the ETS family of transcription factors in cancer, Clin. Cancer Res., 7, 451

Haferlach, 2012, ETV6 rearrangements are recurrent in myeloid malignancies and are frequently associated with other genetic events, Genes Chromosomes Cancer., 51, 328, 10.1002/gcc.21918

Hidalgo, 2012, Ezh1 is required for hematopoietic stem cell maintenance and prevents senescence-like cell cycle arrest, Cell Stem Cell., 11, 649, 10.1016/j.stem.2012.08.001

Hoischen, 2011, De novo nonsense mutations in ASXL1 cause Bohring-Opitz syndrome, Nat. Genet., 43, 729, 10.1038/ng.868

Itzykson, 2013, Prognostic score including gene mutations in chronic myelomonocytic leukemia, J. Clin. Oncol., 31, 2428, 10.1200/JCO.2012.47.3314

Ivanova, 2002, A stem cell molecular signature, Science., 298, 601, 10.1126/science.1073823

Jacobs, 1999, The oncogene and Polycomb-group gene bmi-1 regulates cell proliferation and senescence through the ink4a locus, Nature., 397, 164, 10.1038/16476

Jankowska, 2011, Mutational spectrum analysis of chronic myelomonocytic leukemia includes genes associated with epigenetic regulation: UTX, EZH2, and DNMT3A, Blood., 118, 3932, 10.1182/blood-2010-10-311019

Klinakis, 2011, A novel tumour-suppressor function for the Notch pathway in myeloid leukaemia, Nature., 473, 230, 10.1038/nature09999

Ko, 2011, Ten-Eleven-Translocation 2 (TET2) negatively regulates homeostasis and differentiation of hematopoietic stem cells in mice, Proc. Natl. Acad. Sci. USA., 108, 14566, 10.1073/pnas.1112317108

Koschmieder, 2005, Role of transcription factors C/EBPalpha and PU.1 in normal hematopoiesis and leukemia, Int. J. Hematol., 81, 368, 10.1532/IJH97.05051

Kühn, 1995, Inducible gene targeting in mice, Science., 269, 1427, 10.1126/science.7660125

Lakso, 1996, Efficient in vivo manipulation of mouse genomic sequences at the zygote stage, Proc. Natl. Acad. Sci. USA., 93, 5860, 10.1073/pnas.93.12.5860

Li, 2011, Deletion of Tet2 in mice leads to dysregulated hematopoietic stem cells and subsequent development of myeloid malignancies, Blood., 118, 4509, 10.1182/blood-2010-12-325241

Lin, 2005, NUP98-HOXD13 transgenic mice develop a highly penetrant, severe myelodysplastic syndrome that progresses to acute leukemia, Blood., 106, 287, 10.1182/blood-2004-12-4794

Magini, 2012, Two novel patients with Bohring-Opitz syndrome caused by de novo ASXL1 mutations, Am. J. Med. Genet. A., 158A, 917, 10.1002/ajmg.a.35265

Metzeler, 2011, ASXL1 mutations identify a high-risk subgroup of older patients with primary cytogenetically normal AML within the ELN Favorable genetic category, Blood., 118, 6920, 10.1182/blood-2011-08-368225

Mizuki, 2003, Suppression of myeloid transcription factors and induction of STAT response genes by AML-specific Flt3 mutations, Blood., 101, 3164, 10.1182/blood-2002-06-1677

Moran-Crusio, 2011, Tet2 loss leads to increased hematopoietic stem cell self-renewal and myeloid transformation, Cancer Cell., 20, 11, 10.1016/j.ccr.2011.06.001

Mueller, 2002, Heterozygous PU.1 mutations are associated with acute myeloid leukemia, Blood., 100, 998, 10.1182/blood.V100.3.998

Mullighan, 2007, Pediatric acute myeloid leukemia with NPM1 mutations is characterized by a gene expression profile with dysregulated HOX gene expression distinct from MLL-rearranged leukemias, Leukemia., 21, 2000, 10.1038/sj.leu.2404808

Nilsson, 2000, Isolation and characterization of hematopoietic progenitor/stem cells in 5q-deleted myelodysplastic syndromes: evidence for involvement at the hematopoietic stem cell level, Blood., 96, 2012, 10.1182/blood.V96.6.2012

Nilsson, 2007, The molecular signature of MDS stem cells supports a stem-cell origin of 5q myelodysplastic syndromes, Blood., 110, 3005, 10.1182/blood-2007-03-079368

Ohta, 2002, Polycomb group gene rae28 is required for sustaining activity of hematopoietic stem cells, J. Exp. Med., 195, 759, 10.1084/jem.20011911

Pang, 2013, Hematopoietic stem cell and progenitor cell mechanisms in myelodysplastic syndromes, Proc. Natl. Acad. Sci. USA., 110, 3011, 10.1073/pnas.1222861110

Patel, 2012, Prognostic relevance of integrated genetic profiling in acute myeloid leukemia, N. Engl. J. Med., 366, 1079, 10.1056/NEJMoa1112304

Quivoron, 2011, TET2 inactivation results in pleiotropic hematopoietic abnormalities in mouse and is a recurrent event during human lymphomagenesis, Cancer Cell., 20, 25, 10.1016/j.ccr.2011.06.003

Ramalho-Santos, 2002, “Stemness”: transcriptional profiling of embryonic and adult stem cells, Science., 298, 597, 10.1126/science.1072530

Raza-Egilmez, 1998, NUP98-HOXD13 gene fusion in therapy-related acute myelogenous leukemia, Cancer Res., 58, 4269

Rosenbauer, 2004, Acute myeloid leukemia induced by graded reduction of a lineage-specific transcription factor, PU.1, Nat. Genet., 36, 624, 10.1038/ng1361

Ross, 2003, Classification of pediatric acute lymphoblastic leukemia by gene expression profiling, Blood., 102, 2951, 10.1182/blood-2003-01-0338

Sanada, 2012, Genome-wide analysis of myelodysplastic syndromes, Curr. Pharm. Des., 18, 3163, 10.2174/1381612811209023163

Sawada, 1993, Proliferation and differentiation of myelodysplastic CD34+ cells in serum-free medium: response to individual colony-stimulating factors, Br. J. Haematol., 83, 349, 10.1111/j.1365-2141.1993.tb04656.x

Sawada, 1995, Proliferation and differentiation of myelodysplastic CD34+ cells: phenotypic subpopulations of marrow CD34+ cells, Blood., 85, 194, 10.1182/blood.V85.1.194.bloodjournal851194

Shih, 2012, The role of mutations in epigenetic regulators in myeloid malignancies, Nat. Rev. Cancer., 12, 599, 10.1038/nrc3343

Stadtfeld, 2005, Assessing the role of hematopoietic plasticity for endothelial and hepatocyte development by non-invasive lineage tracing, Development., 132, 203, 10.1242/dev.01558

Steidl, 2006, Essential role of Jun family transcription factors in PU.1 knockdown-induced leukemic stem cells, Nat. Genet., 38, 1269, 10.1038/ng1898

Subramanian, 2005, Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles, Proc. Natl. Acad. Sci. USA., 102, 15545, 10.1073/pnas.0506580102

Tanaka, 2012, Ezh2 augments leukemogenicity by reinforcing differentiation blockage in acute myeloid leukemia, Blood., 120, 1107, 10.1182/blood-2011-11-394932

Tehranchi, 2010, Persistent malignant stem cells in del(5q) myelodysplasia in remission, N. Engl. J. Med., 363, 1025, 10.1056/NEJMoa0912228

Thol, 2011, Prognostic significance of ASXL1 mutations in patients with myelodysplastic syndromes, J. Clin. Oncol., 29, 2499, 10.1200/JCO.2010.33.4938

Vangala, 2003, The myeloid master regulator transcription factor PU.1 is inactivated by AML1-ETO in t(8;21) myeloid leukemia, Blood., 101, 270, 10.1182/blood-2002-04-1288

Vannucchi, 2013, Mutations and prognosis in primary myelofibrosis, Leukemia., 27, 1861, 10.1038/leu.2013.119

Will, 2012, Stem and progenitor cells in myelodysplastic syndromes show aberrant stage-specific expansion and harbor genetic and epigenetic alterations, Blood., 120, 2076, 10.1182/blood-2011-12-399683