Endophytic communities of rhizobacteria and the strategies required to create yield enhancing associations with crops

Applied Soil Ecology - Tập 15 - Trang 183-190 - 2000
A.V Sturz1, J Nowak2
1Prince Edward Island Department of Agriculture and Forestry, PO Box 1600, Charlottetown, PEI, Canada C1A 7N3
2Department of Plant Science, Nova Scotia Agricultural College, Truro, NS, Canada B2N 5E3

Tài liệu tham khảo

Alabouvette, C., Hoeper, H., Lemanceau, P., Steinberg, C., 1996. Soil suppressiveness to diseases induced by soilborne plant pathogens. In: Stotzky, G., Bollag, J.-M. (Eds.), Soil Biochemistry, Vol. 9. Dekker, New York, pp. 371–413. Albus, 1997, Vfr controls quorum sensing in Pseudomonas aeruginosa, J. Bacteriol., 179, 3928, 10.1128/jb.179.12.3928-3935.1997 Andrews, 1990, Biological control in the phyllosphere: realistic goal or false hope?, Can. J. Plant Pathol., 12, 300, 10.1080/07060669009501004 Arshad, 1998, Plant growth substances in the rhizosphere: microbial production and functions, Adv. Agron., 62, 46 Åström, 1988, Differential reactions of wheat and pea genotypes to root inoculation with growth-affecting rhizosphere bacteria, Plant Soil, 109, 263, 10.1007/BF02202093 Atlas, R.M., 1986. Applicability of general ecological principles to microbial ecology. In: Poindexter, J.S., Leadbetter, E.R. (Eds.), Bacteria in Nature, Vol. 2. Plenum Press, New York, pp. 339–370. Azcón-Aguilar, C., Barea, J.M., 1992. Interactions between mycorrhizal fungi and other rhizosphere microorganisms. In: Allen, M.F. (Ed.), Mycorrhizal Functioning: An Integrative Plant–Fungal Process. Chapman & Hall, New York, pp. 163–198. Bakker, 1987, Bioassay for studying the role of siderophores in potato stimulation by Pseudomonas spp. in short potato rotations, Soil Biol. Biochem., 19, 443, 10.1016/0038-0717(87)90036-8 Bell, 1995, Endophytic bacteria in grapevine, Can. J. Microbiol., 41, 46, 10.1139/m95-006 Benhamou, 1996, Induction of defence-related ultrastructural modifications in pea root tissues inoculated with endophytic bacteria, Plant Physiol., 112, 919, 10.1104/pp.112.3.919 Bensalim, 1998, A plant growth promoting rhizobacterium and temperature effects on performance of 18 clones of potato, Am. Pot. J., 75, 145, 10.1007/BF02895849 Bollen, G.J., 1993. Mechanisms involved in nontarget effects of pesticides on soil-borne pathogens. In: Altman, J. (Ed.), Pesticide Interactions in Crop Production: Beneficial and Deleterious Effects. CRC Press, Boca Raton, FL, pp. 281–301. Bolton, H.J., Fredrickson, J.K., Elliott, L.F., 1993. Microbial ecology of the rhizosphere. In: Metting, F.B.J. (Ed.), Soil Microbial Ecology. Dekker, New York, pp. 27–63. Bowen, 1976, Microbial colonization of plant roots, Ann. Rev. Phytopathol., 14, 121, 10.1146/annurev.py.14.090176.001005 Brockwell, J., Herridge, D.F., Morthorpe, L.J., Roughley, R.J., 1988. Numerical effects of Rhizobium population on legume symbiosis. In: Beck, D.P., Materon, L.A. (Eds.), Nitrogen Fixation by Legumes in Mediterranean Agriculture. Marunus Nijhoff, Dordrecht, pp. 178–193. Carroll, 1988, Fungal endophytes in stems and leaves: from latent pathogen to mutualistic symbiont, Ecology, 69, 2, 10.2307/1943154 Chanway, 1997, Inoculation of tree roots with plant growth promoting soil bacteria: an emerging technology for reforestation, For. Sci., 43, 99 Chanway, 1994, Growth of outplanted lodgepole pine seedlings one year after inoculation with growth promoting rhizobacteria, For. Sci., 40, 238 Chanway, 1988, Cultivar-specific growth promotion of spring wheat (Triticum aestivum L.) by coexistent Bacillus species, Can. J. Microbiol., 34, 925, 10.1139/m88-164 Cherrington, 1987, Incidence of inhibitory pseudomonads in the Pacific Northwest, Plant Soil, 101, 159, 10.1007/BF02370640 Christiansen-Weniger, 1998, Endophytic establishment of diazotrophic bacteria in auxin induced tumours of cereal crops, CRC Crit. Rev. Plant Sci., 17, 55, 10.1016/S0735-2689(98)00354-2 Clay, 1988, Fungal endophytes of grasses: a defensive mutualism between plants and fungi, Ecology, 69, 10, 10.2307/1943155 Conn, 1997, A gnotobiotic bioassay for studying interactions between potatoes and plant growth-promoting rhizobacteria, Can. J. Microbiol., 43, 801, 10.1139/m97-117 Cook, R.J., Baker, K.F., 1983. The Nature and Practice of Biological Control of Plant Pathogens. American Phytopathological Society, St. Paul, MN. Darbyshire, 1973, Bacteria and protozoa in the rhizosphere, Pestic. Sci., 4, 349, 10.1002/ps.2780040312 de Bruijn, 1995, Potential pitfalls of trying to extend symbiotic interactions of nitrogen-fixing organisms to presently non-nodulated plants, such as rice, Plant Soil, 174, 225, 10.1007/BF00032249 Dixon, 1997, Nif gene transfer and expression in chloroplasts: prospects and problems, Plant Soil, 194, 193, 10.1023/A:1004296703638 Foster, R.C., Bowen, G.D., 1982. Plant surfaces and bacterial growth: the rhizosphere and rhizoplane. In: Mount, M.S., Lacy, G.H. (Eds.), Phytopathogenic Prokaryotes. Dekker, New York, pp. 159–185. Foster, 1978, Ultrastructure of the wheat rhizosphere, New Phytol., 76, 343, 10.1111/j.1469-8137.1976.tb01469.x Fredrickson, 1985, Effects on winter wheat seedling growth by toxin producing rhizobacteria, Plant Soil, 83, 399, 10.1007/BF02184452 Frommel, 1991, Growth enhancement and developmental modifications of in vitro grown potato (Solanum tuberosum ssp. tuberosum) as affected by a nonfluorescent Pseudomonas sp, Plant Physiol., 96, 928, 10.1104/pp.96.3.928 Frommel, 1993, Treatment of potato tubers with a growth promoting Pseudomonas sp.: bacterium distribution in the rhizosphere and plant growth responses, Plant Soil, 150, 51, 10.1007/BF00779175 Glick, 1995, The enhancement of plant growth by free-living bacteria, Can. J. Microbiol., 41, 109, 10.1139/m95-015 Gough, 1997, Interactions between bacterial diazotrophs and non-legume dicots: Arabidopsis thaliana as a model plant, Plant Soil, 194, 123, 10.1023/A:1004235919993 Grayston, 1998, Selective influence of plant species on microbial diversity in the rhizosphere, Soil Biol. Biochem., 30, 369, 10.1016/S0038-0717(97)00124-7 Gyurján, I., Korányi, P., Preininger, É., Varga, S.S., Paless, G., 1995. Artificial plant–Azotobacter symbiosis for atmospheric nitrogen fixation. In: Fendrik, I. (Ed.), Azospirillum VI and Related Microorganisms. NATO ASI Series, Vol. 37. Springer, Berlin, pp. 401–413. Harman, G.E., Lumsden, R.D., 1990. Biological disease control. In: Lynch, J.M. (Ed.), The Rhizosphere. Wiley, London, pp. 259–280. Hastings, 1994, Metapopulation dynamics and genetics, Ann. Rev. Ecol. Syst., 25, 167, 10.1146/annurev.es.25.110194.001123 Henry, S.M., 1966. Symbiosis. Academic Press, New York. Henry, 1981, Natural (nonpathogenic) death of the cortex of wheat and barley seminal roots, as evidenced by nuclear staining with acridine orange, Plant Soil, 60, 255, 10.1007/BF02374110 Holland, 1994, PPFM’s and other covert contaminants: is there more to plant physiology than just plant?, Ann. Rev. Plant Physiol. Plant Mol. Biol., 45, 197, 10.1146/annurev.pp.45.060194.001213 Ingham, 1985, Review of the effects of twelve selected biocides on target and non-target soil organisms, Crop Protection, 4, 3, 10.1016/0261-2194(85)90002-X Kennedy, 1997, Biological nitrogen fixation in non-leguminous field crops: facilitating the evolution of an effective association between Azospirillum and wheat, Plant Soil, 194, 65, 10.1023/A:1004260222528 Kloepper, 1992, Proposed elimination of the term endorhizosphere, Phytopathology, 82, 726 Kunc, F., Macura, J., 1988. Mechanisms of adaptation and selection of microorganisms in the soil. In: Vancura, V., Kunc, F. (Eds.), Soil Microbial Associations. Elsevier, Amsterdam, pp. 281–299. Ladha, J.K., de Bruijn, F.J., Malik, K.A., 1997. Opportunities for biological nitrogen fixation in rice and other non-legumes. In: Ladha, J.K., de Bruijn, F.J., Malik, K.A. (Eds.), Papers Presented at the Second Working Group of the Frontier Project on Nitrogen Fixation in Rice, NIBGE, Faisalabad, Pakistan, October 13–15, 1996. Plant Soil 194 (1/2). Levins, 1976, Extinction, Lectures Math. Life Sci., 2, 75 Linderman, R.G., 1994. Role of VAM in biocontrol. In: Pfleger, F.L., Linderman, R.G. (Eds.), Mycorrhizae and Plant Health. American Phytopathological Society, St. Paul, MN, pp. 1–25. McInroy, 1995, Survey of indigenous bacterial endophytes from cotton and sweet corn, Plant Soil, 173, 337, 10.1007/BF00011472 Merharg, 1995, Loss of exudates from roots of perennial rye grass inoculated with a range of microorganisms, Plant Soil, 170, 345, 10.1007/BF00010488 Miller, 1989, Variation and composition in the rhizospheres of maize, wheat and grass cultivars, wheat and grass cultivars, Can. J. Microbiol., 35, 656, 10.1139/m89-106 Mundt, 1976, Bacteria within ovules and seeds, Appl. Environ. Microbiol., 32, 694, 10.1128/AEM.32.5.694-698.1976 Neal, 1970, Changes in the rhizosphere microflora of spring wheat induced by disomic substitution of a chromosome, Can. J. Microbiol., 16, 153, 10.1139/m70-027 Nehl, 1996, Deleterious rhizosphere bacteria: an integrating perspective, Appl. Soil Ecol., 5, 1, 10.1016/S0929-1393(96)00124-2 Nowak, 1998, Benefits of in vitro “biotization” of plant tissue cultures with microbial inoculants, In Vitro Cell. Dev. Biol. Plant, 34, 122, 10.1007/BF02822776 Nowak, 1998, From laboratory to applications: challenges and progress with in vitro dual cultures of potato and beneficial bacteria, Plant Cell Tiss. Organ. Cult., 52, 97, 10.1023/A:1005965822698 Nowak, J., Bensalim, S., Smith, C.D., Dunbar, C., Asiedu, S.K., Madani, A., Lazarovits, G., Northcott, D., Sturz, A.V., 2000. Microplantlet weaning by in vitro bacterization. Potato Res., in press. O’Connell, 1996, Engineering the rhizosphere: expressing a bias, Trends-biotechnology, 14, 83, 10.1016/0167-7799(96)80928-0 O’Dell, 1992, Root endophytes of lupin and some other legumes in northwestern USA, New Phytol., 122, 479, 10.1111/j.1469-8137.1992.tb00076.x Old, K.M., Nicolson, T.H., 1978. The root cortex as part of a microbial continuum. In: Loutit, M.V., Miles, J.A.R. (Eds.), Microbial Ecology. Springer, Berlin, pp. 291–294. Petersen, 1981, Pathway of movement of apoplastic fluorescent dye tracers through the endodermis at the site of secondary root formation in corn (Zea mays) and broad bean (Vicia faba), Can. J. Bot., 59, 618, 10.1139/b81-087 Powell, K.A., Rhodes, D.J., 1994. Strategies for the progression of biological fungicides into field evaluation. BCPC Monograph No. 59, pp. 307–315. Preininger, 1997, In vitro establishment of nitrogen-fixing strawberry (Fragaria×annassa) via artificial symbiosis with Azomonas insignis, In Vitro Cell. Dev. Biol. Plant, 33, 190, 10.1007/s11627-997-0020-z Quadt-Hallman, 1997, Bacterial endophytes in cotton: location and interaction with other plant associated bacteria, Can. J. Microbiol., 43, 254, 10.1139/m97-035 Quadt-Hallman, 1997, Bacterial endophytes in cotton: mechanisms of entering the plant, Can. J. Microbiol., 43, 577, 10.1139/m97-081 Rayner, A.D.M., 1997. Degrees of Freedom: Living in Dynamic Boundaries. Imperial College Press, London, 312 pp. Reddy, P.M., Ladha, J.K., 1995. Can symbiotic nitrogen fixation be extended to rice? Nitrogen fixation fundamentals and applications. In: Proceedings of the International Congress on Nitrogen Fixation, Vol. 27. St. Petersburg, Russia, May 28–June 3, 1995, pp. 629–633. Richards, J., 1997. Induced resistance responses in potato inoculated in vitro with a plant growth promoting pseudomonad. M.Sc. Thesis. Dalhousie University, Halifax, NS, Canada. Salmond, 1995, The bacterial ‘enigma’: cracking the code of cell–cell communication, Mol. Microbiol., 16, 615, 10.1111/j.1365-2958.1995.tb02424.x Schippers, 1987, Interactions of deleterious and beneficial rhizosphere microorganisms and the effect of cropping practices, Ann. Rev. Phytopathol., 25, 339, 10.1146/annurev.py.25.090187.002011 Schroth, 1981, Selected topics in biological control, Ann. Rev. Microbiol., 35, 453, 10.1146/annurev.mi.35.100181.002321 Sharma, 1998, Enhancement of verticillium wilt resistance in tomato transplants by in vitro co-culture of seedlings with a plant growth promoting rhizobacterium (Pseudomonas sp. strain. PsJN), Can. J. Microbiol., 44, 528, 10.1139/w98-017 Sitnikov, 1995, Transcriptional regulation of bioluminescence genes from Vibrio fischeri, Mol. Microbiol., 17, 801, 10.1111/j.1365-2958.1995.mmi_17050801.x Stewart, A.H., 1997. Suppression of verticillium wilt in potatoes with a plant growth promoting rhizobacterium. M.Sc. Thesis. Dalhousie University, Halifax, NS, Canada. Sticher, 1997, Systemic acquired resistance, Ann. Rev. Phytopathol., 35, 235, 10.1146/annurev.phyto.35.1.235 Stoltzfus, 1997, Isolation of endophytic bacteria from rice and assessment of their potential for supplying rice with biologically fixed nitrogen, Plant Soil, 194, 25, 10.1023/A:1004298921641 Sturz, 1995, The role of endophytic bacteria during seed piece decay and potato tuberization, Plant Soil, 175, 257, 10.1007/BF00011362 Sturz, 1995, Endophytic bacterial systems governing red clover growth and development, Ann. Appl. Biol., 126, 285, 10.1111/j.1744-7348.1995.tb05366.x Sturz, 1996, Endophytic bacteria of red clover as causal agents of allelopathic clover–maize syndromes, Soil Biol. Biochem., 28, 583, 10.1016/0038-0717(95)00168-9 Sturz, 1998, The potential benefits from cultivar specific red clover–potato crop rotations, Ann. Appl. Biol., 133, 365, 10.1111/j.1744-7348.1998.tb05836.x Sturz, 1999, The influence of fosthiazate and aldicarb on populations of plant growth promoting bacteria and bacterial feeding nematodes in the potato root zone, Plant Pathol., 48, 26, 10.1046/j.1365-3059.1999.00305.x Sturz, 1997, A review of plant disease, pathogen interactions and microbial antagonism under conservation tillage in temperate humid agriculture, Soil Till. Res., 41, 169, 10.1016/S0167-1987(96)01095-1 Sturz, 1998, Associations of bacterial endophyte populations from red clover and potato crops with potential for beneficial allelopathy, Can. J. Microbiol., 44, 162, 10.1139/w97-146 Sturz, 1999, Endophytic bacterial communities in the periderm of potato tubers and their potential to improve resistance to soil-borne plant pathogens, Plant Pathol., 48, 360, 10.1046/j.1365-3059.1999.00351.x Surette, 1998, Quorum sensing in Escherichia coli and Salmonella typhimurium, Proc. Natl. Acad. Sci. USA, 95, 7046, 10.1073/pnas.95.12.7046 Swensen, 1997, The impact of molecular systematics on the hypotheses for the evolution of root nodule symbioses and implications for expanding symbioses to new host plant genera, Plant Soil, 194, 185, 10.1023/A:1004240004063 Swift, 1996, Quorum sensing: a population density component in the determination of bacterial phenotype, Trends-biochem. Sci., 21, 214, 10.1016/0968-0004(96)10027-X Thies, 1991, Influence of the size of indigenous rhizobial populations on establishment and symbiotic performance of introduced rhizobia on field grown legumes, Appl. Environ. Microbiol., 57, 19, 10.1128/AEM.57.1.19-28.1991 van Peer, 1990, Characterization of root surface and endorhizosphere pseudomonads in relation to their colonization of roots, Appl. Environ. Microbiol., 56, 2462, 10.1128/AEM.56.8.2462-2470.1990 Varga, 1994, Artificial associations between Daucus and nitrogen-fixing Azotobacter cells in vitro, Physiol. Plant., 90, 789, 10.1111/j.1399-3054.1994.tb02538.x Volkmar, 1998, Effects of seed inoculation with a strain of Pseudomonas fluorescens on root growth and activity of wheat in well-watered and drought stressed glass-fronted rhizotrons, Can. J. Plant Sci., 78, 545, 10.4141/P97-129 Weller, 1988, Biological control of soilborne plant pathogens in the rhizosphere with bacteria, Ann. Rev. Phytopathol., 26, 379, 10.1146/annurev.py.26.090188.002115 Wilson, 1995, Endophyte — the evolution of a term, and clarification of its use and definition, Oikos, 73, 274, 10.2307/3545919