An Improved General Amino Acid Replacement Matrix

Molecular Biology and Evolution - Tập 25 Số 7 - Trang 1307-1320
Si Quang Le1, Olivier Gascuel1
1Méthodes et Algorithmes pour la Bioinformatique, LIRMM, CNRS, Université Montpellier II, Montpellier, France

Tóm tắt

Từ khóa


Tài liệu tham khảo

2007, Molecular Biology and Evolution, 24, 1, 10.1093/molbev/msl136

Adachi, 1996, Journal of Molecular Evolution, 42, 459, 10.1007/BF02498640

Adachi, 2000, Journal of Molecular Evolution, 50, 348, 10.1007/s002399910038

1974, IEEE TRANS AUTOMAT CONTR, 19, 716, 10.1109/TAC.1974.1100705

Arvestad, 2006, Journal of Molecular Evolution, 62, 663, 10.1007/s00239-004-0113-9

Arvestad, 1997, Journal of Molecular Evolution, 45, 696, 10.1007/PL00006274

Bateman, 2002, Nucleic Acids Research, 30, 276, 10.1093/nar/30.1.276

Bennet, 1994, Protein Engineering Design and Selection, 7, 1323, 10.1093/protein/7.11.1323

Boeckmann, 2003, Nucleic Acids Research, 31, 365, 10.1093/nar/gkg095

Castresana, 2000, Molecular Biology and Evolution, 17, 540, 10.1093/oxfordjournals.molbev.a026334

Devauchelle, 2001, Journal of computational biology : a journal of computational molecular cell biology, 8, 381, 10.1089/106652701752236205

Dimmic, 2002, Journal of Molecular Evolution, 55, 65, 10.1007/s00239-001-2304-y

Felsenstein, 1981, Journal of Molecular Evolution, 17, 368, 10.1007/BF01734359

Goldman, 1998, Genetics, 149, 445, 10.1093/genetics/149.1.445

Goldman, 2000, Systematic Biology, 49, 652, 10.1080/106351500750049752

Gu, 1995, Molecular Biology and Evolution, 12, 546

Guindon, 2003, Systematic Biology, 52, 696, 10.1080/10635150390235520

Holmes, 2002, Journal of molecular biology, 317, 753, 10.1006/jmbi.2002.5405

2005, Bioinformatics, 21, 4338, 10.1093/bioinformatics/bti713

Jones, 1992, Bioinformatics, 8, 275, 10.1093/bioinformatics/8.3.275

Jones, 1994, FEBS Letters, 339, 269, 10.1016/0014-5793(94)80429-X

Keane, 2006, BMC evolutionary biology [electronic resource], 6, 29, 10.1186/1471-2148-6-29

Kishino, 1989, Journal of Molecular Evolution, 29, 170, 10.1007/BF02100115

Klosterman, 2006, BMC bioinformatics [electronic resource], 7, 428, 10.1186/1471-2105-7-428

1995, Protein Engineering Design and Selection, 8, 641, 10.1093/protein/8.7.641

2004, Molecular Biology and Evolution, 22, 193

2007, Molecular Biology and Evolution, 24, 1464, 10.1093/molbev/msm064

2004, Molecular Biology and Evolution, 21, 1095, 10.1093/molbev/msh112

1941, ANN MATH STAT, 12, 236, 10.1214/aoms/1177731755

M  ller, 2000, Journal of computational biology : a journal of computational molecular cell biology, 7, 761, 10.1089/10665270050514918

Posada, 2004, Systematic Biology, 53, 793, 10.1080/10635150490522304

Rambaut, 1997, Bioinformatics, 13, 235, 10.1093/bioinformatics/13.3.235

Saitou, 1987, Molecular Biology and Evolution, 4, 406

1994, American Journal of Botany, 81, 183

1978, ANN STAT, 6, 461, 10.1214/aos/1176344136

Thorne, 2000, Current opinion in genetics & development, 10, 602, 10.1016/S0959-437X(00)00142-8

Thorne, 1996, Molecular Biology and Evolution, 13, 666, 10.1093/oxfordjournals.molbev.a025627

Veerassamy, 2003, Journal of computational biology : a journal of computational molecular cell biology, 10, 997, 10.1089/106652703322756195

Whelan, 2001, Molecular Biology and Evolution, 18, 691, 10.1093/oxfordjournals.molbev.a003851

Yang, 1993, Molecular Biology and Evolution, 10, 1396

Yang, 1998, Molecular Biology and Evolution, 15, 1600, 10.1093/oxfordjournals.molbev.a025888