Effects of temperature and glucose concentration on the growth and respiration of fungal species isolated from a highly productive coastal upwelling ecosystem

Adomas, 2008, Comparative analysis of transcript abundance in Pinus sylvestris after challenge with a saprotrophic, pathogenic or mutualistic fungus, Tree Physiology, 28, 885, 10.1093/treephys/28.6.885 Alcaraz, 2013, Effects of temperature on the metabolic stoichiometry of Arctic zooplankton, Biogeosciences, 10, 689, 10.5194/bg-10-689-2013 Aluwihare, 1999, A comparision of the chemical characteristics of oceanic DOM and extracellular DOM produced by marine algae, Marine Ecology Progress Series, 186, 105, 10.3354/meps186105 An, 2013, Triazoles and other n-containing metabolites from the marine-derived endophytic fungus Penicillium chrysogenum EN-118, Helvetica Chimica Acta, 96, 682, 10.1002/hlca.201200433 Babu, 2010, Fungi diversity in different coastal marine ecosystem along south east coast of India, International Journal of Microbiological Research, 1, 175 Banerjee, 1993, Spectrophotometric determination of mycelia biomass, Biotechnology Techniques, 7, 313, 10.1007/BF00150905 Bartnicki-Garcia, 1979, Chitosomes and chitin synthesis, 149 Belsky, 1984, Factors affecting endogenous respiration in a freshwater fungus, Mycologia, 76, 804, 10.1080/00275514.1984.12023917 Benner, 2002, Chemical composition and reactivity, 59 Biersmith, 1998, Carbohydrates in phytoplankton and freshly produced dissolved organic matter, Marine Chemistry, 63, 131, 10.1016/S0304-4203(98)00057-7 Bowler, 2009, Microbial oceanography in a sea of opportunity, Nature, 459, 180, 10.1038/nature08056 Brown, 2001, Immune recognition: a new receptor for β-glucans, Nature, 413, 36, 10.1038/35092620 Calder, 1984, 431 Cathrine, 2009, Anaerobic denitrification in fungi from the coastal marine sediments off Goa, India, Mycological Research, 113, 100, 10.1016/j.mycres.2008.08.009 Chambergo, 2002, Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays, The Journal of Biological Chemistry, 277, 13983, 10.1074/jbc.M107651200 Choi, 1992, Effects of temperature on two psychrophilic ecotypes of a heterotrophic nanoflagellate, paraphysomonas imperforata, Applied and Environmental Microbiology, 58, 593, 10.1128/aem.58.2.593-599.1992 Chow, 1993, Intra-and interspecific restriction fragment length polymorphism in mitochondrial genes of Thunnus tuna species, Bulletin of National Research Institute of Far Seas Fisheries, 30, 207 Cornut, 2010, Early stages of leaf decomposition are mediated by aquatic fungi in the hyporheic zone of woodland streams, Freshwater Biology, 55, 2541, 10.1111/j.1365-2427.2010.02483.x Costello, 2001, European Register of Marine Species: a Check-list of the Marine Species in Europe and a Bibliography of Guides to Their Identification, vol. 50, 463 Cuevas, 2004, Microbial abundance and activity in the seasonal upwelling area off Concepción (∼36°S), central Chile: a comparison of upwelling and non-upwelling conditions, Deep-Sea Research II, 51, 2427, 10.1016/j.dsr2.2004.07.026 Damare, 2008, Fungi and macroaggregation in deep-sea sediments, Microbial Ecology, 56, 168, 10.1007/s00248-007-9334-y Daneri, 2000, Primary production and community respiration in the Humboldt Current System off Chile and associated oceanic areas, Marine Ecology Progress Series, 197, 41, 10.3354/meps197041 del Giorgio, 2005, Respiration in aquatic ecosystems: from single cells to the biosphere Eppley, 1972, Temperature and phytoplankton growth in the sea, Fishery Bulletin, 70, 1063 Fell, 2001, Basidiomycetous yeasts, Part VII, 3 Ferreira, 2006, Whole-stream nitrate addition affects litter decomposition and associated fungi but not invertebrates, Oecologia, 149, 718, 10.1007/s00442-006-0478-0 Ferreira, 2011, Synergistic effects of water temperature and dissolved nutrients on litter decomposition and associated fungi, Global Change Biology, 17, 551, 10.1111/j.1365-2486.2010.02185.x Fischer, 1983, DNA fragments differing by single base-pair substitutions are separated in denaturing gradient gels: correspondence with melting theory, Proceedings of the National Academy of Sciences of the United States of America, 80, 1579, 10.1073/pnas.80.6.1579 Frey-Klett, 2011, Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists, Microbiology and Molecular Biology Reviews, 75, 583, 10.1128/MMBR.00020-11 Gams, 1971, Cephalosporium-artige Schimmelpilze (Hyphomycetes), Mycologia, 65, 253 Giovannoni, 2012, Seasonality in ocean microbial communities, Science, 335, 671, 10.1126/science.1198078 González, 2000, The role of faecal material in the particulate organic carbon flux in the northern Humboldt Current, Chile (23°S), before and during the 1997–1998 El Niño, Journal of Plankton Research, 22, 499, 10.1093/plankt/22.3.499 Greene, 1951, 464 Grob, 2003, Cuantificación del transporte de agua costa-oceano a traves de filamentos y remolinos ricos en clorofila-a. en la zona centro-sur de Chile (35.5°–37.5°S), Gayana Oceanol, 67, 55 Gulis, 2004, Effects of nutrient enrichment on the decomposition of wood and associated microbial activity in streams, Freshwater Biology, 49, 1437, 10.1111/j.1365-2427.2004.01281.x Gunde-Cimermen, 2003, Extremophilic fungi in Arctic ice: a relationship between adaptation to low temperature and water activity, Physics and Chemistry of the Earth, 28, 1273, 10.1016/j.pce.2003.08.056 Gutiérrez, 2010, First record of filamentous fungi in the coastal upwelling ecosystem off central Chile, Gayana, 74, 66 Gutiérrez, 2011, The role of fungi in processing marine organic matter in the upwelling ecosystem off Chile, Marine Biology, 158, 205, 10.1007/s00227-010-1552-z Hernández, 2012, Temporal variability of incidental solar radiation and modulating factors in a coastal upwelling area (36°S), Progress in Oceanography, 92, 18, 10.1016/j.pocean.2011.07.011 Holm-Hansen, 1973, The use of ATP determinations in ecological studies, Bulletins from the Ecological Research Committee, 17, 215 Hyde, 1998, Role of fungi in marine ecosystems, Biodiversity and Conservation, 7, 1147, 10.1023/A:1008823515157 Ikeda, 2001, Metabolic rates of epipelagic marine copepods as a function of body mass and temperature, Marine Biology, 139, 587, 10.1007/s002270100608 Iriarte, 2012, Primary production and plankton carbon biomass in a river-influenced upwelling area off Concepción, Chile, Progress in Oceanography, 92-95, 97, 10.1016/j.pocean.2011.07.009 Irwin, 2007, Measurement of temperature and salinity effects on oxygen consumption of Artemia franiscana K., measured using fibre-optic oxygen microsensors, Hydrobiologia, 575, 109, 10.1007/s10750-006-0358-y Janse, 1999, Microbial breakdown of Phaeocystis mucopolysaccharides, Limnology and Oceanography, 44, 1447, 10.4319/lo.1999.44.6.1447 Janssen, 1999, Processing of riparian and wetland plant litter in the River Murray, South Australia, Hydrobiologia, 411, 53, 10.1023/A:1003891720922 Jin, 2003, A new rate law describing microbial respiration, Applied and Environmental Microbiology, 69, 2340, 10.1128/AEM.69.4.2340-2348.2003 Johnson, 1961, 668 Jones, 2000, Marine fungi: some factors influencing biodiversity, Fungal Diversity, 4, 53 Joseph-Horne, 2000, Functional diversity within the mitochondrial electron transport chain of plant pathogenic fungi, Pest Management Science, 56, 24, 10.1002/(SICI)1526-4998(200001)56:1<24::AID-PS71>3.0.CO;2-Y Joseph-Horne, 2001, Fungal respiration: a fusion of standard and alternative components, Biochimica et Biophysica Acta, 1504, 179, 10.1016/S0005-2728(00)00251-6 Julianti, 2011, Acremostrictin, a highly oxygenated metabolite from the marine fungus Acremonium strictum, Journal of Natural Products, 74, 2592, 10.1021/np200707y Kagami, 2004, Daphnia can protect diatoms from fungal parasitism, Limnology and Oceanography, 49, 680, 10.4319/lo.2004.49.3.0680 Kleiber, 1961, 454 Kohlmeyer, 1979, 690 Laruelle, 2010, Evaluation of sinks and sources of CO2 in the global coastal ocean using a spatially-explicit typology of estuaries and continental shelves, Geophysical Research Letters, 37, L15607, 10.1029/2010GL043691 Lepère, 2007, Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors, FEMS Microbiology Ecology, 61, 483, 10.1111/j.1574-6941.2007.00359.x Levipan, 2007, A time series of prokaryote secondary production in the oxygen minimum zone of the Humboldt current system, off central Chile, Progress in Oceanography Volume, 75, 531, 10.1016/j.pocean.2007.08.029 Lindahl, 2010, Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi, ISME Journal, 4, 872, 10.1038/ismej.2010.19 Lindstedt, 1981, Body size, physiological time, and longevity of homeothermic animals, Quarterly Review of Biology, 56, 1, 10.1086/412080 Mabee, 2006, Canadian biomass reserves for biorefining, Applied Biochemistry and Biotechnology, 129, 22, 10.1385/ABAB:129:1:22 Madan, 1998 Magan, 2007, Fungi in extreme environment, 85 Maheshwari, 2000, Thermophilic fungi: their physiology and enzymes, Microbiology and Molecular Biology Reviews, 63, 461, 10.1128/MMBR.64.3.461-488.2000 Martin, 2011, Sequencing the fungal tree of life, The New Phytologist, 190, 818, 10.1111/j.1469-8137.2011.03688.x Mateo, 2002, Accumulation of type A trichothecenes in maize. wheat and rice by Fusarium sporotrichioides isolates under diverse culture conditions, International Journal of Food Microbiology, 72, 115, 10.1016/S0168-1605(01)00625-0 May, 2001, Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage, Canadian Journal of Microbiology, 47, 829, 10.1139/w01-086 McMahon, 1983 McMahon, 1974, Variation in aufwuchs at six freshwater habitats in terms of carbon biomass and of carbon: nitrogen ratio, Hydrobiologia, 45, 391, 10.1007/BF00012027 McManus, 1988, Bacterioplankton Production in the Nearshore Zone during Upwelling off Central Chile, 10.3354/meps043011 Meletiadis, 2001, Journal of Clinical Microbiology, 39, 4256, 10.1128/JCM.39.12.4256-4263.2001 Meyers, 1966, Variability and reproduction of the marine fungus Lulworthia floridana, Helgolaender Wissenschaftliche Meeresuntersuchunge, 13, 436, 10.1007/BF01611960 Mille-Lindblom, 2006, Antagonism between bacteria and fungi: substrate competition and a possible tradeoff between fungal growth and tolerance towards bacteria, Oikos, 113, 233, 10.1111/j.2006.0030-1299.14337.x Montero, 2007, Productivity cycles in the coastal upwelling area off Concepción: the importance of diatoms and bacterioplankton in the organic carbon flux, Progress in Oceanography, 75, 518, 10.1016/j.pocean.2007.08.013 Mopper, 1992, Determination of sugars in unconcentrated seawater and other natural waters by liquid chromatography and pulsed amperometric detection, Environmental Science and Technology, 26, 133, 10.1021/es00025a014 Nirenberg, 1976, Untersuchungen liber die morphologische und biologische Differenzierung in der Fusarium Sektion Liseola, Mitteilungen aus der Biologischen Bundesanstalt füer Land-und Forstwirtschaft Berlin-Dahlem, 169, 1 Pang, 2005, Molecular approaches for assessing fungal diversity in marine substrata, Botanica Marina, 48, 332, 10.1515/bot.2005.046 Pantoja, 2011, Degradation capability of the coastal environment adjacent to the Itata River in central Chile (36.5° S), Biogeosciences Discussion, 8, 1335 Parada, 2001, Circulación del Golfo de Arauco en un periodo de transicio'n estacional: Un nuevo enfoque, Investigaciones Marinas, 29, 11, 10.4067/S0717-71782001000100002 Peters, 1983 Prasad, 1979, Effect of temperature on respiration of a mesophilic and a thermophilic fungus, Plant Physiology, 64, 347, 10.1104/pp.64.2.347 Prothero, 1986, Scaling of energy metabolism in unicellular organisms: a re-analysis, Comparative Biochemistry and Physiology, 83A, 243, 10.1016/0300-9629(86)90569-4 Quiñones, 2009, Spatial and temporal variability of planktonic archaeal abundance in the Humboldt Current System off Chile, Deep Sea Research II, 56, 1073, 10.1016/j.dsr2.2008.09.012 Quiñones, 2010, The Humboldt current system, 44 Raghukumar, 2004, The role of fungi in marine detrital processes, 125 Raghukumar, 2008, Marine fungal biotechnology: an ecological perspective, Fungal Diversity, 31, 19 Rasconi, 2009, Use of calcofluor white for detection, identification, and quantification of phytoplanktonic fungal parasites, Applied and Environmental Microbiology, 75, 2545, 10.1128/AEM.02211-08 Rich, 1996, Concentrations and uptake of neutral monosaccharides along 140°W in the Equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM flux, Limnology and Oceanography, 41, 595, 10.4319/lo.1996.41.4.0595 Richards, 2012, Marine fungi: their ecology and molecular diversity, Annual Review of Marine Science, 4, 495, 10.1146/annurev-marine-120710-100802 Rubner, 1883, Über den Einfluss der Körpergröße auf Stoff- und Kraftwechsel, Zeitschrift für Biologie, 19, 535 Sánchez, 2008, Seasonal changes in particulate biogenic and lithogenic silica in the upwelling system off Concepción (∼36°S), Chile, and their relationship to fluctuations in marine productivity and continental input, Continental Shelf Research, 28, 2594, 10.1016/j.csr.2008.07.010 Schmidt-Nielsen, 1984 Seitz, 1979, Ergosterol as a measure of fungal growth, Phytopathology, 69, 1202, 10.1094/Phyto-69-1202 Seto, 1975, Growth and respiratory activity of mold fungus (Trichoderma lignorum), Botanical Magazine Tokyo, 88, 255, 10.1007/BF02488368 Sguros, 1962, Role of Marine fungi in the biochemistry of the oceans. I. Establishment of quantitative technique for cultivation, Growth Measurement and Production of Inocula: Mycologia, 54, 521 Sharma, 1977, Critique of the chitin assay technique for estimation of fungal biomass, Transactions of the British Mycological Society, 69, 479, 10.1016/S0007-1536(77)80087-9 Shearer, 2007, Fungal biodiversity in aquatic habitats, Biodiversity and Conservation, 16, 49, 10.1007/s10531-006-9120-z Sherbakoff, 1915 Skoog, 1999, Bacterial utilization of dissolved glucose in the upper water column of the Gulf of Mexico, Limnology and Oceanography, 44, 1625, 10.4319/lo.1999.44.7.1625 Sobarzo, 2007, Coastal upwelling and seasonal cycles that influence the water column over the continental shelf off central Chile, Progress in Oceanography, 75, 363, 10.1016/j.pocean.2007.08.022 Suberkropp, 1998, Microorganisms and organic matter decomposition, 120 Suberkropp, 2010, Ecosystem and physiological scales of microbial responses to nutrients in a detritus-based stream: results of a 5-year continuous enrichment, Limnology and Oceanography, 55, 149, 10.4319/lo.2010.55.1.0149 Swer, 2011, Fungal population and diversity in organically amended agricultural soils of Meghalaya, India, Journal of Organic Systems, 6, 1177 Takishita, 2006, Molecular evidence demonstrating the basidiomycetous fungus Cryptococcus curvatus is the dominant microbial eukaryote in sediment at the Kuroshima Knoll methane seep, Extremophiles, 10, 165, 10.1007/s00792-005-0495-7 Thom, 1910, Cultural studies of species of Penicillium, U.S.D.A. Bureau of Animal Industry Bulletin, 118, 1 Troncoso, 2003, Bacterial carbon flow in the Humboldt Current System off Chile, Marine Ecology Progress Series, 250, 1, 10.3354/meps250001 Van Veen, 1979, Conversion of biovolume measurements of soil organisms, grown under various moisture tensions, to biomass and their nutrient content, Applied and Environmental Microbiology, 37, 686, 10.1128/aem.37.4.686-692.1979 Varó, 1993, Comparison of two methods for measuring the rates of oxygen consumption of small aquatic animals (Artemia), Comparative Biochemistry and Physiology, 106A, 551, 10.1016/0300-9629(93)90252-Y West, 2002, Allometric scaling of metabolic rate from molecules and mitochondria to cells and mammals, Proceedings of the National Academy of Sciences of the United States of America, 99, 2473, 10.1073/pnas.012579799 White, 1991, The effect of temperature and algal biomass on bacterial production and specific growth-rate in fresh-water and marine habitats, Microbial Ecology, 21, 99, 10.1007/BF02539147 Williams, 1998, The balance of plankton respiration and photosynthesis in the open ocean, Nature, 394, 55, 10.1038/27878 Wiśniewska, 2011, Fusarium sporotrichioides Sherb. toxin evaluated in cereal grain with Trichoderma harzianum, Journal of Plant Protection Research, 51, 134, 10.2478/v10045-011-0023-y Yang, 2005, Portraits of a Y-family DNA polymerase, FEBS Letters, 579, 868, 10.1016/j.febslet.2004.11.047 Yoshida, 1992, Penicillium decumbens, a new cause of fungus ball, Chest, 101, 1152, 10.1378/chest.101.4.1152 Znidarsic, 2001, The morphology of filamentous fungi in submerged cultivations as a bioprocess parameter, Food Technology and Biotechnology, 39, 237