MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Molecular Biology and Evolution - Tập 30 Số 4 - Trang 772-780 - 2013
Kazutaka Katoh1,2, Daron M. Standley2
1Computational Biology Research Center, The National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan
2Immunology Frontier Research Center, Osaka University, Suita, Osaka, Japan

Tóm tắt

Từ khóa


Tài liệu tham khảo

Altschul, 1998, Proteins, 32, 88, 10.1002/(SICI)1097-0134(19980701)32:1<88::AID-PROT10>3.0.CO;2-J

Barton, 1987, Journal of molecular biology, 198, 327, 10.1016/0022-2836(87)90316-0

Berger, 1991, Bioinformatics, 7, 479, 10.1093/bioinformatics/7.4.479

2011, Bioinformatics, 27, 2068, 10.1093/bioinformatics/btr320

2012, Bioinformatics, 28, 495, 10.1093/bioinformatics/btr701

Cannone, 2002, BMC bioinformatics [electronic resource], 3, 2, 10.1186/1471-2105-3-2

2009, Nucleic Acids Research, 37, D141, 10.1093/nar/gkn879

Dessimoz, 2010, Genome biology, 11, R37, 10.1186/gb-2010-11-4-r37

Feng, 1987, Journal of Molecular Evolution, 25, 351, 10.1007/BF02603120

2009, Molecular Biology and Evolution, 26, 1879, 10.1093/molbev/msp098

2007, Molecular Biology and Evolution, 24, 2433, 10.1093/molbev/msm176

Gotoh, 1993, Bioinformatics, 9, 361, 10.1093/bioinformatics/9.3.361

Gotoh, 1995, Bioinformatics, 11, 543, 10.1093/bioinformatics/11.5.543

Henikoff, 1992, PNAS, 89, 10915, 10.1073/pnas.89.22.10915

Higgins, 1988, Gene, 73, 237, 10.1016/0378-1119(88)90330-7

Jones, 1992, Bioinformatics, 8, 275, 10.1093/bioinformatics/8.3.275

Jones, 1994, FEBS Letters, 339, 269, 10.1016/0014-5793(94)80429-X

Katoh, 2009, Methods in molecular biology (Clifton, N.J.), 537, 39, 10.1007/978-1-59745-251-9_3

2012, Bioinformatics, 28, 3144, 10.1093/bioinformatics/bts578

Katoh, 2005, Nucleic Acids Research, 33, 511, 10.1093/nar/gki198

Katoh, 2002, Nucleic Acids Research, 30, 3059, 10.1093/nar/gkf436

2007, Bioinformatics, 23, 372, 10.1093/bioinformatics/btl592

Katoh, 2008, BMC bioinformatics [electronic resource], 9, 212, 10.1186/1471-2105-9-212

2008, Briefings in Bioinformatics, 9, 286, 10.1093/bib/bbn013

2010, Bioinformatics, 26, 1899, 10.1093/bioinformatics/btq224

2011, Genome Research, 21, 487, 10.1101/gr.113985.110

2010, Molecular Biology and Evolution, 27, 2507, 10.1093/molbev/msq140

2012, Bioinformatics, 28, 1684, 10.1093/bioinformatics/bts198

Matsen, 2010, BMC bioinformatics [electronic resource], 11, 538, 10.1186/1471-2105-11-538

2012, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 17, 247

2010, FUNGAL ECOLOGY, 3, 284, 10.1016/j.funeco.2010.05.002

Notredame, 1998, Bioinformatics, 14, 407, 10.1093/bioinformatics/14.5.407

Nuin, 2006, BMC bioinformatics [electronic resource], 7, 471, 10.1186/1471-2105-7-471

O'Sullivan, 2004, Journal of molecular biology, 340, 385, 10.1016/j.jmb.2004.04.058

2008, Nucleic Acids Research, 36, 2295, 10.1093/nar/gkn072

2012, Nucleic Acids Research, 40, D290, 10.1093/nar/gkr1065

2011, BMC bioinformatics [electronic resource], 12, S38, 10.1186/1471-2105-12-S1-S38

Sievers, 2011, 7, 539, 10.1038/msb.2011.75

2010, Nucleic Acids Research, 38, D161, 10.1093/nar/gkp885

Standley, 2007, BMC bioinformatics [electronic resource], 8, 116, 10.1186/1471-2105-8-116

Standley, 2004, Proteins, 57, 381, 10.1002/prot.20211

2012, Bioinformatics, 28, 1336, 10.1093/bioinformatics/bts158

Tabei, 2008, BMC bioinformatics [electronic resource], 9, 33, 10.1186/1471-2105-9-33

1994, Nucleic Acids Research, 22, 4673, 10.1093/nar/22.22.4673

2009, Bioinformatics, 25, 1189, 10.1093/bioinformatics/btp033