Occurrence and distribution of tetraether membrane lipids in soils: Implications for the use of the TEX86 proxy and the BIT index

Organic Geochemistry - Tập 37 - Trang 1680-1693 - 2006
Johan W.H. Weijers1, Stefan Schouten1, Otto C. Spaargaren2, Jaap S. Sinninghe Damsté1
1Royal Netherlands Institute for Sea Research (NIOZ), Department of Marine Biogeochemistry and Toxicology, P.O. Box 59, 1790 AB Den Burg, Texel, The Netherlands
2ISRIC-World Soil Information, P.O. Box 353, 6700 AJ Wageningen, The Netherlands

Tài liệu tham khảo

Bintrim, 1997, Molecular phylogeny of Archaea from soil, Proceedings of the National Academy of Sciences of the United States of America, 94, 277, 10.1073/pnas.94.1.277 Buckley, 1998, Phylogenetic analysis of nonthermophilic members of the kingdom Crenarchaeota and their diversity and abundance in soils, Applied and Environmental Microbiology, 64, 4333, 10.1128/AEM.64.11.4333-4339.1998 DeLong, 1998, Everything in moderation: Archaea as “non-extremophiles”, Current Opinion in Genetics & Development, 8, 649, 10.1016/S0959-437X(98)80032-4 DeLong, 1994, High abundance of Archaea in Antarctic marine picoplankton, Nature, 371, 695, 10.1038/371695a0 Gattinger, 2003, Characterisation of Archaea in soils by polar lipid analysis, Acta Biotechnologica, 23, 21, 10.1002/abio.200390003 Herfort, L., Schouten, S., Boon, J.P., Woltering, M., Baas, M., Weijers, J.W.H., Sinninghe Damsté, J.S., 2006. Characterization of transport and deposition of terrestrial organic matter in the southern North Sea using the BIT index. Limnology and Oceanography. Hopmans, 2000, Analysis of intact tetraether lipids in archaeal cell material and sediments by high performance liquid chromatography/atmospheric pressure chemical ionization mass spectrometry, Rapid Communications in Mass Spectrometry, 14, 585, 10.1002/(SICI)1097-0231(20000415)14:7<585::AID-RCM913>3.0.CO;2-N Hopmans, 2004, A novel proxy for terrestrial organic matter in sediments based on branched and isoprenoid tetraether lipids, Earth and Planetary Science Letters, 224, 107, 10.1016/j.epsl.2004.05.012 Jurgens, 1997, Novel group within the kingdom of Crenarchaeota from boreal forest soil, Applied and Environmental Microbiology, 63, 803, 10.1128/AEM.63.2.803-805.1997 Jurgens, 2000, Identification of novel Archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization, FEMS Microbiology Ecology, 34, 45 Karner, 2001, Archaeal dominance in the mesopelagic zone of the Pacific Ocean, Nature, 409, 507, 10.1038/35054051 Keough, 2003, Archaeal nucleic acids in picoplankton from great lakes on three continents, Microbial Ecology, 46, 238, 10.1007/s00248-003-1003-1 Koga, 1993, Ether polar lipids of methanogenic bacteria: structures, comparative aspects, and biosyntheses, Microbiological Reviews, 57, 164, 10.1128/MMBR.57.1.164-182.1993 Könneke, 2005, Isolation of an autotrophic ammonia-oxidizing marine archaeon, Nature, 437, 543, 10.1038/nature03911 Kotsyurbenko, 2004, Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West-Siberian peat bog, Environmental Microbiology, 6, 1159, 10.1111/j.1462-2920.2004.00634.x Langworthy, 1977, Long-chain diglycerol tetraethers from Thermoplasma acidophilum, Biochimica et Biophysica Acta, 487, 37, 10.1016/0005-2760(77)90042-X MacGregor, 1997, Crenarchaeota in Lake Michigan sediment, Applied and Environmental Microbiology, 63, 1178, 10.1128/AEM.63.3.1178-1181.1997 Nicol, 2003, Molecular analysis of methanogenic archaeal communities in managed and natural upland pasture soils, Global Change Biology, 9, 1451, 10.1046/j.1365-2486.2003.00673.x Nicol, 2003, The impact of grassland management on archaeal community structure in upland pasture rhizosphere soil, Environmental Microbiology, 5, 152, 10.1046/j.1462-2920.2003.00399.x Ochsenreiter, 2003, Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR, Environmental Microbiology, 5, 787, 10.1046/j.1462-2920.2003.00476.x Pancost, 2003, Carbon isotopic compositions of prokaryotic lipids as tracers of carbon cycling in diverse settings, Chemical Geology, 195, 29, 10.1016/S0009-2541(02)00387-X Pancost, 2000, δ13C values and radiocarbon dates of microbial biomarkers as tracers for carbon recycling in peat deposits, Geology, 28, 663, 10.1130/0091-7613(2000)28<663:CVARDO>2.0.CO;2 Pearson, 2004, Nonmarine crenarchaeol in Nevada hot springs, Applied and Environmental Microbiology, 70, 5229, 10.1128/AEM.70.9.5229-5237.2004 Pesaro, 2002, Identification of novel Crenarchaeota and Euryarchaeota clusters associated with different depth layers of a forest soil, FEMS Microbiology Ecology, 42, 89, 10.1111/j.1574-6941.2002.tb00998.x Powers, 2004, Crenarchaeotal membrane lipids in lake sediments: a new paleotemperature proxy for continental paleoclimate reconstruction?, Geology, 32, 613, 10.1130/G20434.1 Preston, 1996, A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov., Proceedings of the National Academy of Sciences of the United States of America, 93, 6241, 10.1073/pnas.93.13.6241 Schleper, 1997, Recovery of Crenarchaeotal ribosomal DNA sequences from freshwater-lake sediments, Applied and Environmental Microbiology, 63, 321, 10.1128/AEM.63.1.321-323.1997 Schouten, 2000, Widespread occurrence of structurally diverse tetraether membrane lipids: evidence for the ubiquitous presence of low-temperature relatives of hyperthermophiles, Proceedings of the National Academy of Sciences of the United States of America, 97, 14421, 10.1073/pnas.97.26.14421 Schouten, 2002, Distributional variations in marine crenarchaeotal membrane lipids: a new tool for reconstructing ancient sea water temperatures?, Earth and Planetary Science Letters, 204, 265, 10.1016/S0012-821X(02)00979-2 Sinninghe Damsté, 2000, Newly discovered non-isoprenoid glycerol dialkyl glycerol tetraether lipids in sediments, Chemical Communications, 1683, 10.1039/b004517i Sinninghe Damsté, 2002, Distribution of membrane lipids of planktonic Crenarchaeota in the Arabian Sea, Applied and Environmental Microbiology, 68, 2997, 10.1128/AEM.68.6.2997-3002.2002 Sinninghe Damsté, 2002, Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota, Journal of Lipid Research, 43, 1641, 10.1194/jlr.M200148-JLR200 Sizova, 2003, Isolation and characterization of oligotrophic acido-tolerant methanogenic consortia from a Sphagnum peat bog, FEMS Microbiology Ecology, 45, 301, 10.1016/S0168-6496(03)00165-X Sluijs, A., Schouten, S., Pagani, M., Woltering, M., Brinkhuis, H., Sinninghe Damsté, J.S., Dickens, G.R., Huber, M., Reichart, G.-J., Stein, R., Matthiessen, J., Lourens, L.J., Pedentchouk, N., Backman, J., Moran, K. & the Expedition 302 Scientists, 2006. Subtropical Arctic Ocean temperatures during the Palaeocene-Eocene thermal maximum. Nature 441, 610–613. Takai, 2001, Archaeal diversity in waters from deep South African gold mines, Applied and Environmental Microbiology, 67, 5750, 10.1128/AEM.67.21.5750-5760.2001 Vetriani, 1999, Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments, Applied and Environmental Microbiology, 65, 4375, 10.1128/AEM.65.10.4375-4384.1999 Weijers, 2004, Water table related variations in the abundance of intact archaeal membrane lipids in a Swedish peat bog, FEMS Microbiology Letters, 239, 51, 10.1016/j.femsle.2004.08.012 Weijers, 2006, Membrane lipids of mesophilic anaerobic bacteria thriving in peats have typical archaeal traits, Environmental Microbiology, 8, 648, 10.1111/j.1462-2920.2005.00941.x West, 2002, Endogenous methanogenesis stimulates oxidation of atmospheric CH4 in alpine tundra soil, Microbial Ecology, 43, 408, 10.1007/s00248-001-1049-x Wuchter, 2004, Temperature-dependent variation in the distribution of tetraether membrane lipids of marine Crenarchaeota: implications for TEX86 paleothermometry, Paleoceanography, 19, 10.1029/2004PA001041