Metabolic engineering of the malonyl-CoA pathway to efficiently produce malonate in Saccharomyces cerevisiae
Tài liệu tham khảo
Aziah Serri, 2010, A continuous esterification of malonic acid with citronellol using packed bed reactor: Investigation of parameter and kinetics study, Food Bioprod. Process., 88, 327, 10.1016/j.fbp.2008.12.002
Blackwell, 1997, Manganese uptake and toxicity in magnesium-supplemented and unsupplemented Saccharomyces cerevisiae, Appl. Microbiol. Biotechnol., 47, 180, 10.1007/s002530050909
Brewster, 1994, Regulation of pyruvate carboxylase isozyme (PYC1, PYC2) gene expression in Saccharomyces cerevisiae during fermentative and nonfermentative growth, Arch. Biochem. Biophys., 311, 62, 10.1006/abbi.1994.1209
Chen, 2013, Metabolic engineering of Escherichia coli: a sustainable industrial platform for bio-based chemical production, Biotechnol. Adv., 31, 1200, 10.1016/j.biotechadv.2013.02.009
Chen, 2013, Establishing a platform cell factory through engineering of yeast acetyl-CoA metabolism, Metab. Eng., 15, 48, 10.1016/j.ymben.2012.11.002
Chen, 2012, Profiling of cytosolic and peroxisomal acetyl-CoA metabolism in Saccharomyces cerevisiae, PLoS One, 7
Choi, 2014, Improving polyketide and fatty acid synthesis by engineering of the yeast acetyl-CoA carboxylase, J. Biotechnol., 187, 56, 10.1016/j.jbiotec.2014.07.430
Chotineeranat, 2010, Effect of calcium ions on ethanol production from molasses by Saccharomyces cerevisiae, Sugar Tech., 12, 120, 10.1007/s12355-010-0024-6
Curran, 2013, Metabolic engineering of muconic acid production in Saccharomyces cerevisiae, Metab. Eng., 15, 55, 10.1016/j.ymben.2012.10.003
Gietz, 2007, Frozen competent yeast cells that can be transformed with high efficiency using the LiAc/SS carrier DNA/PEG method, Nat. Protoc., 2, 1, 10.1038/nprot.2007.17
Hawes, 1996, Primary structure and tissue-specific expression of human β-hydroxyisobutyryl-coenzyme a hydrolase, J. Biol. Chem., 271, 26430, 10.1074/jbc.271.42.26430
Hegemann, 2011, Delete and repeat: a comprehensive toolkit for sequential gene knockout in the budding yeast Saccharomyces cerevisiae, Methods Mol. Biol., 765, 189, 10.1007/978-1-61779-197-0_12
Kim, 1988, Assays for malonyl-coenzyme A synthase, Anal. Biochem., 170, 45, 10.1016/0003-2697(88)90087-5
Ko, 2016, Effect of manganese ions on ethanol fermentation by xylose isomerase expressing Saccharomyces cerevisiae under acetic acid stress, Bioresour. Technol., 222, 422, 10.1016/j.biortech.2016.09.130
Köhrer, 1991, [27] Preparation of high molecular weight RNA, Methods Enzymol., 194, 398, 10.1016/0076-6879(91)94030-G
Lee, 1997, Improved efficiency and stability of multiple cloned gene insertions at the δ sequences of Saccharomyces cerevisiae, Appl. Microbiol. Biotechnol., 48, 339, 10.1007/s002530051059
Li, 2006, Preparation and characterization of Cr–P coatings by electrodeposition from trivalent chromium electrolytes using malonic acid as complex, Surf. Coating. Technol., 201, 2578, 10.1016/j.surfcoat.2006.05.001
Li, 2021, Recent progress in metabolic engineering of Saccharomyces cerevisiae for the production of malonyl-CoA derivatives, J. Biotechnol., 325, 83, 10.1016/j.jbiotec.2020.11.014
Livak, 2001, Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method, Methods, 25, 402, 10.1006/meth.2001.1262
Parekh, 1996, An integrating vector for tunable, high copy, stable integration into the dispersed ty δ sites of Saccharomyces cerevisiae, Biotechnol. Prog., 12, 16, 10.1021/bp9500627
Peters
PRONK, 1996, Pyruvate metabolism in Saccharomyces cerevisiae, Yeast, 12, 1607, 10.1002/(SICI)1097-0061(199612)12:16<1607::AID-YEA70>3.0.CO;2-4
Rouhier
Shi, 2014, Improving production of malonyl coenzyme a-derived metabolites by abolishing Snf1-dependent regulation of Acc1, mBio, 5, 10.1128/mBio.01130-14
Shirra, 2001, Inhibition of acetyl coenzyme A carboxylase activity restores expression of the INO1 gene in a snf1 mutant strain of Saccharomyces cerevisiae, Mol. Cell Biol., 21, 5710, 10.1128/MCB.21.17.5710-5722.2001
Song, 2016, Metabolic engineering of Escherichia coli for the production of 3-hydroxypropionic acid and malonic acid through β-alanine route, ACS Synth. Biol., 5, 1256, 10.1021/acssynbio.6b00007
Soyuduru, 2008, Application of a statistical technique to investigate calcium, sodium, and magnesium ion effect in yeast fermentation, Appl. Biochem. Biotechnol., 152, 326, 10.1007/s12010-008-8327-8
Szlosek, 2016, Application and mechanism of malonic acid as a green alternative for protein-crosslinking, Green Sustain. Chem., 6, 6, 10.4236/gsc.2016.62010
Trofimova, 2010, Anhydrobiosis in yeast: influence of calcium and magnesium ions on yeast resistance to dehydration–rehydration, FEMS Microbiol. Lett., 308, 55, 10.1111/j.1574-6968.2010.01989.x
Trott, 2010, AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading, J. Comput. Chem., 31, 455, 10.1002/jcc.21334
Werpy, 2004, 76
Zhang, 2013, A simple, universal, efficient PCR-based gene synthesis method: sequential OE-PCR gene synthesis, Gene, 524, 347, 10.1016/j.gene.2013.03.126
Zhao, 2009, Impact of zinc supplementation on the improvement of ethanol tolerance and yield of self-flocculating yeast in continuous ethanol fermentation, J. Biotechnol., 139, 55, 10.1016/j.jbiotec.2008.08.013
Zhao, 2013, ESCRT components regulate the expression of the ER/Golgi calcium pump gene PMR1 through the Rim101/Nrg1 pathway in budding yeast, J. Mol. Cell Biol., 5, 336, 10.1093/jmcb/mjt025
Zhao, 2021, Effect of magnesium ions on glucaric acid production in the engineered Saccharomyces cerevisiae, J. Biotechnol., 332, 61, 10.1016/j.jbiotec.2021.03.020