Evolutionary change in 5S rRNA secondary structure and a phylogenic tree of 352 5S rRNA species

Biosystems - Tập 19 - Trang 163-172 - 1986
Hiroshi Hori1, Syozo Osawa1
1Laboratory of Molecular Genetics, Department of Biology, Faculty of Science, Nagoya University, Chikusa-ku, Nagoya, 464 Japan

Tài liệu tham khảo

Böhm, 1985, Conserved unpaired adenine residues are important for ordered structures of 5S ribosomal RNA, Eur. J. Biochem., 147, 503, 10.1111/j.0014-2956.1985.00503.x Dekio, 1984, Secondary structure and phylogeny of Staphylococcus and Micrococcus 5S rRNAs, J. Bacteriol., 159, 233, 10.1128/jb.159.1.233-237.1984 Delihas, 1984, Structure, function and evolution of 5S rRNAs, Prog. Nucleic Acid Res. Mol. Biol., 31, 161, 10.1016/S0079-6603(08)60377-3 Fang, 1982, Sequences of three molluscan 5S ribosomal RNAs confirm the validity of a dynamic secondary structure model, Nucleic Acids Res., 10, 4679, 10.1093/nar/10.15.4679 Fox, 1975, 5S RNA secondary structure, Nature, 256, 505, 10.1038/256505a0 Fox, 1982, Archaebacterial 5S rRNA, Zentralbl. Bakteriol., Hyg. I Abt. Orig., C3, 330 Hori, 1979, Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species, 76, 381 Hori, 1979, Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species, 76, 4157 Hori, 1985, Evolution of green plants as deduced from 5S rRNA sequences, 82, 820 Hori, 1985, Evolution of organisms deduced from 5S rRNA sequences, 369 Lane, 1985, Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5SrRNA sequences, J. Bacteriol., 163, 75, 10.1128/jb.163.1.75-81.1985 Jarsch, 1985, Sequence of the 23S rRNA gene from the archaebacterium Methanococcus vaniellii: evolutionary and functional implications, Mol. Gen. Genet., 200, 305, 10.1007/BF00425441 Kimura, 1980, A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences, J. Mol. Evol., 16, 111, 10.1007/BF01731581 Kimura, 1974, On some principles governing molecular evolution, 71, 2848 Kumazaki, 1983, Phylogeny of protozoa deduced from 5S rRNA sequences, J. Mol. Evol., 19, 411, 10.1007/BF02102316 MacDonell, 1985, Nuclease S1 analysis of eubacterial 5S rRNA secondary structure, J. Mol. Evol., 22, 237, 10.1007/BF02099753 Madison, 1968, Primary structure of RNA, Annu. Rev. Biochem., 37, 131, 10.1146/annurev.bi.37.070168.001023 Margulis, 1982 Muto, 1984, Preferential use of A- and U-rich codons for Mycoplasma capricolum ribosomal proteins S8 and L6, Nucleic Acids Res., 12, 8209, 10.1093/nar/12.21.8209 Nishikawa, 1974, Nucleotide sequence of 5S RNA from Torulopsis utilis, FEBS Lett., 40, 106, 10.1016/0014-5793(74)80904-X Normore, 1970, Guanine plus cytosine (G + C) composition of bacteria, H24 Ohama, 1984, Evolution of multicellular animals as deduced from 5S rRNA sequences: a possible early emergence of the Mesozoa, Nucleic Acids Res., 12, 5101, 10.1093/nar/12.12.5101 Sakonju, 1982, Contact points between a positive transcription factor and the Xenopus 5S RNA gene, Cell, 31, 395, 10.1016/0092-8674(82)90133-7 Shapiro, 1970, Distribution of purines and pyrimidines in deoxyribonucleic acids, H80 Sneath, 1973, Taxonomic structure, 227 Sueoka, 1962, On the genetic basis of variation and heterogeneity of DNA base composition, 48, 582 Schuster, 1966 Tinoco, 1971, Estimation of secondary structure in ribonucleic acids, Nature, 230, 362, 10.1038/230362a0 Woese, 1977, Phylogenetic structure of the prokaryotic domain: the primary kingdoms, 74, 5088 Wolters, 1984, Comparative analyses of small ribosomal RNAs with respect to the evolution of plastids and mitochondria, Endocytol. C. Res., 1, 1