New developments in microbial interspecies signaling

Current Opinion in Microbiology - Tập 12 - Trang 205-214 - 2009
Elizabeth Anne Shank1, Roberto Kolter1
1Department of Microbiology and Molecular Genetics, Harvard Medical School, Boston, MA 02115 USA

Tài liệu tham khảo

Waters, 2005, Quorum sensing: cell-to-cell communication in bacteria, Annu Rev Cell Dev Biol, 21, 319, 10.1146/annurev.cellbio.21.012704.131001 Ryan, 2008, Diffusible signals and interspecies communication in bacteria, Microbiology, 154, 1845, 10.1099/mic.0.2008/017871-0 Currie, 2001, A community of ants, fungi, and bacteria: a multilateral approach to studying symbiosis, Annu Rev Microbiol, 55, 357, 10.1146/annurev.micro.55.1.357 Gerardo, 2006, Ancient host-pathogen associations maintained by specificity of chemotaxis and antibiosis, PLoS Biol, 4, e235, 10.1371/journal.pbio.0040235 Scott, 2008, Bacterial protection of beetle-fungus mutualism, Science, 322, 63, 10.1126/science.1160423 Broderick, 2006, Midgut bacteria required for Bacillus thuringiensis insecticidal activity, Proc Natl Acad Sci U S A, 103, 15196, 10.1073/pnas.0604865103 Minerdi, 2008, Bacterial ectosymbionts and virulence silencing in a Fusarium oxysporum strain, Environ Microbiol, 10, 1725, 10.1111/j.1462-2920.2008.01594.x Minerdi, 2008, Volatile organic compounds: a potential direct long-distance mechanism for antagonistic action of Fusarium oxysporum strain MSA 35, Environ Microbiol, 11, 844, 10.1111/j.1462-2920.2008.01805.x Hoffman, 2006, Selection for Staphylococcus aureus small-colony variants due to growth in the presence of Pseudomonas aeruginosa, Proc Natl Acad Sci U S A, 103, 19890, 10.1073/pnas.0606756104 Kreth, 2005, Competition and coexistence between Streptococcus mutans and Streptococcus sanguinis in the dental biofilm, J Bacteriol, 187, 7193, 10.1128/JB.187.21.7193-7203.2005 Tong, 2007, Streptococcus oligofermentans inhibits Streptococcus mutans through conversion of lactic acid into inhibitory H2O2: a possible counteroffensive strategy for interspecies competition, Mol Microbiol, 63, 872, 10.1111/j.1365-2958.2006.05546.x Tong, 2008, SO-LAAO, a novel L-amino acid oxidase that enables Streptococcus oligofermentans to outcompete Streptococcus mutans by generating H2O2 from peptone, J Bacteriol, 190, 4716, 10.1128/JB.00363-08 Cloud-Hansen, 2006, Breaching the great wall: peptidoglycan and microbial interactions, Nat Rev Microbiol, 4, 710, 10.1038/nrmicro1486 Peterson, 2006, Peptidoglycan from Bacillus cereus mediates commensalism with rhizosphere bacteria from the Cytophaga-Flavobacterium group, Appl Environ Microbiol, 72, 5421, 10.1128/AEM.02928-05 Xu, 2008, Bacterial peptidoglycan triggers Candida albicans hyphal growth by directly activating the adenylyl cyclase Cyr1p, Cell Host Microbe, 4, 28, 10.1016/j.chom.2008.05.014 Shah, 2008, A eukaryotic-like Ser/Thr kinase signals bacteria to exit dormancy in response to peptidoglycan fragments, Cell, 135, 486, 10.1016/j.cell.2008.08.039 Berleman, 2006, Rippling is a predatory behavior in Myxococcus xanthus, J Bacteriol, 188, 5888, 10.1128/JB.00559-06 Shimkets, 1982, Induction of coordinated movement of Myxococcus xanthus cells, J Bacteriol, 152, 451, 10.1128/jb.152.1.451-461.1982 Berleman, 2007, Multicellular development in Myxococcus xanthus is stimulated by predator-prey interactions, J Bacteriol, 189, 5675, 10.1128/JB.00544-07 Rigali, 2008, Feast or famine: the global regulator DasR links nutrient stress to antibiotic production by Streptomyces, EMBO Rep, 9, 670, 10.1038/embor.2008.83 Fajardo, 2008, Antibiotics as signals that trigger specific bacterial responses, Curr Opin Microbiol, 11, 161, 10.1016/j.mib.2008.02.006 Mesak, 2008, Effects of subinhibitory concentrations of antibiotics on SOS and DNA repair gene expression in Staphylococcus aureus, Antimicrob Agents Chemother, 52, 3394, 10.1128/AAC.01599-07 Starner, 2008, Subinhibitory concentrations of azithromycin decrease nontypeable Haemophilus influenzae biofilm formation and diminish established biofilms, Antimicrob Agents Chemother, 52, 137, 10.1128/AAC.00607-07 Skindersoe, 2008, Effects of antibiotics on quorum sensing in Pseudomonas aeruginosa, Antimicrob Agents Chemother, 52, 3648, 10.1128/AAC.01230-07 Linares, 2006, Antibiotics as intermicrobial signaling agents instead of weapons, Proc Natl Acad Sci U S A, 103, 19484, 10.1073/pnas.0608949103 Dietrich, 2008, Redox-active antibiotics control gene expression and community behavior in divergent bacteria, Science, 321, 1203, 10.1126/science.1160619 Rickard, 2006, Autoinducer 2: a concentration-dependent signal for mutualistic bacterial biofilm growth, Mol Microbiol, 60, 1446, 10.1111/j.1365-2958.2006.05202.x Hogan, 2006, Talking to themselves: autoregulation and quorum sensing in fungi, Eukaryot Cell, 5, 613, 10.1128/EC.5.4.613-619.2006 Torres, 2007, Controlled synthesis of the DSF cell-cell signal is required for biofilm formation and virulence in Xanthomonas campestris, Environ Microbiol, 9, 2101, 10.1111/j.1462-2920.2007.01332.x Dow, 2003, Biofilm dispersal in Xanthomonas campestris is controlled by cell-cell signaling and is required for full virulence to plants, Proc Natl Acad Sci U S A, 100, 10995, 10.1073/pnas.1833360100 He, 2008, Quorum sensing and virulence regulation in Xanthomonas campestris, FEMS Microbiol Rev, 32, 842, 10.1111/j.1574-6976.2008.00120.x Wang, 2004, A bacterial cell-cell communication signal with cross-kingdom structural analogues, Mol Microbiol, 51, 903, 10.1046/j.1365-2958.2003.03883.x Boon, 2008, A novel DSF-like signal from Burkholderia cenocepacia interferes with Candida albicans morphological transition, ISME J, 2, 27, 10.1038/ismej.2007.76 Cugini, 2007, Farnesol, a common sesquiterpene, inhibits PQS production in Pseudomonas aeruginosa, Mol Microbiol, 65, 896, 10.1111/j.1365-2958.2007.05840.x McAlester, 2008, Signal-mediated interactions between Pseudomonas aeruginosa and Candida albicans, J Med Microbiol, 57, 563, 10.1099/jmm.0.47705-0 Fouhy, 2007, Diffusible signal factor-dependent cell-cell signaling and virulence in the nosocomial pathogen Stenotrophomonas maltophilia, J Bacteriol, 189, 4964, 10.1128/JB.00310-07 Ryan, 2008, Interspecies signalling via the Stenotrophomonas maltophilia diffusible signal factor influences biofilm formation and polymyxin tolerance in Pseudomonas aeruginosa, Mol Microbiol, 68, 75, 10.1111/j.1365-2958.2008.06132.x Chatterjee, 2008, Living in two worlds: the plant and insect lifestyles of Xylella fastidiosa, Annu Rev Phytopathol, 46, 243, 10.1146/annurev.phyto.45.062806.094342 Dow, 2008, Diversification of the function of cell-to-cell signaling in regulation of virulence within plant pathogenic xanthomonads, Sci Signal, 1, pe23, 10.1126/stke.121pe23 Davies, 2008, A fatty acid messenger is responsible for inducing dispersion in microbial biofilms, J Bacteriol Gross, 2007, Strategies to unravel the function of orphan biosynthesis pathways: recent examples and future prospects, Appl Microbiol Biotechnol, 75, 267, 10.1007/s00253-007-0900-5 Oh, 2005, Libertellenones A-D: induction of cytotoxic diterpenoid biosynthesis by marine microbial competition, Bioorg Med Chem, 13, 5267, 10.1016/j.bmc.2005.05.068 Oh, 2007, Induced production of emericellamides A and B from the marine-derived fungus Emericella sp. in competing co-culture, J Nat Prod, 70, 515, 10.1021/np060381f Kurosawa, 2008, Rhodostreptomycins, antibiotics biosynthesized following horizontal gene transfer from Streptomyces padanus to Rhodococcus fascians, J Am Chem Soc, 130, 1126, 10.1021/ja077821p Straight, 2006, Interactions between Streptomyces coelicolor and Bacillus subtilis: role of surfactants in raising aerial structures, J Bacteriol, 188, 4918, 10.1128/JB.00162-06 Straight, 2007, A singular enzymatic megacomplex from Bacillus subtilis, Proc Natl Acad Sci U S A, 104, 305, 10.1073/pnas.0609073103 Butcher, 2007, The identification of bacillaene, the product of the PksX megacomplex in Bacillus subtilis, Proc Natl Acad Sci U S A, 104, 1506, 10.1073/pnas.0610503104 Kaeberlein, 2002, Isolating ‘uncultivable’ microorganisms in pure culture in a simulated natural environment, Science, 296, 1127, 10.1126/science.1070633 Bollmann, 2007, Incubation of environmental samples in a diffusion chamber increases the diversity of recovered isolates, Appl Environ Microbiol, 73, 6386, 10.1128/AEM.01309-07 Saito, 2008, Stimulation of Fusobacterium nucleatum biofilm formation by Porphyromonas gingivalis, Oral Microbiol Immunol, 23, 1, 10.1111/j.1399-302X.2007.00380.x Kawarai, 2007, Mixed-species biofilm formation by lactic acid bacteria and rice wine yeasts, Appl Environ Microbiol, 73, 4673, 10.1128/AEM.02891-06 Simoes, 2007, Biofilm interactions between distinct bacterial genera isolated from drinking water, Appl Environ Microbiol, 73, 6192, 10.1128/AEM.00837-07 Kikuchi, 2007, Spatial and temporal population dynamics of a naturally occurring two-species microbial community inside the digestive tract of the medicinal leech, Appl Environ Microbiol, 73, 1984, 10.1128/AEM.01833-06 Karatan, 2005, NspS, a predicted polyamine sensor, mediates activation of Vibrio cholerae biofilm formation by norspermidine, J Bacteriol, 187, 7434, 10.1128/JB.187.21.7434-7443.2005 Kapfhammer, 2005, Role for glycine betaine transport in Vibrio cholerae osmoadaptation and biofilm formation within microbial communities, Appl Environ Microbiol, 71, 3840, 10.1128/AEM.71.7.3840-3847.2005 Landry, 2006, Mucin-Pseudomonas aeruginosa interactions promote biofilm formation and antibiotic resistance, Mol Microbiol, 59, 142, 10.1111/j.1365-2958.2005.04941.x Barraud, 2006, Involvement of nitric oxide in biofilm dispersal of Pseudomonas aeruginosa, J Bacteriol, 188, 7344, 10.1128/JB.00779-06 Schaefer, 2008, A new class of homoserine lactone quorum-sensing signals, Nature, 454, 595, 10.1038/nature07088 Kolodkin-Gal, 2007, A linear pentapeptide is a quorum-sensing factor required for mazEF-mediated cell death in Escherichia coli, Science, 318, 652, 10.1126/science.1147248 Ibrahim, 2007, Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system?, J Bacteriol, 189, 8844, 10.1128/JB.01057-07 Nichols, 2008, Short peptide induces an ‘uncultivable’ microorganism to grow in vitro, Appl Environ Microbiol, 74, 4889, 10.1128/AEM.00393-08 Chen, 2006, Feedback control of morphogenesis in fungi by aromatic alcohols, Genes Dev, 20, 1150, 10.1101/gad.1411806