The DNA binding domain and bending angle of E. coli CAP protein

Cell - Tập 47 - Trang 995-1005 - 1986
Huei-Nin Liu-Johnson1, Marc R. Gartenberg1, Donald M. Crothers1
1Department of Chemistry Yale University New Haven, Connecticut 06511 USA

Tài liệu tham khảo

Aiba, 1982, Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein, Nucl. Acids Res., 10, 1345, 10.1093/nar/10.4.1345 Anderson, 1981, Structure of the cro repressor from bacteriophage λ and its interaction with DNA, Nature, 290, 754, 10.1038/290754a0 Arnott, 1983, Heteronomous DNA, Nucl. Acids Res., 11, 4141, 10.1093/nar/11.12.4141 Bloomfield, 1974, Physical Chemistry of Nucleic Acids, 164 deCrombrugghe, 1984, Cyclic AMP receptor protein: role in transcription activation, Science, 224, 831, 10.1126/science.6372090 Frederick, 1984, Kinked DNA in crystalline complex with EcoRI endonuclease, Nature, 309, 327, 10.1038/309327a0 Fried, 1982, On the interaction of the E. coli cyclic AMP receptor and lac repressor with DNA Fried, 1981, Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis, Nucl. Acids Res., 13, 6505, 10.1093/nar/9.23.6505 Fried, 1983, CAP and RNA polymerase interactions with the lac promoter: binding stoichiometry and long range effects, Nucl. Acids Res., 11, 141, 10.1093/nar/11.1.141 Fried, 1984, Equilibrium studies of the cAMP receptor protein-DNA interaction, J. Mol. Biol., 172, 241, 10.1016/S0022-2836(84)80025-X Garner, 1981, A gel electrophoretic method for quantifying the binding of proteins to specific DNA regions: application to components of the E. coli lactose operon regulatory system, Nucl. Acids Res., 13, 3047, 10.1093/nar/9.13.3047 Jordan, 1985, Systematic variation in DNA length yields highly ordered repressor-operator cocrystals, Science, 230, 1383, 10.1126/science.3906896 Kolb, 1983, On the different affinities of CRP at the lac, gal, and MaT promoter regions, Nucl. Acids Res., 11, 7833, 10.1093/nar/11.22.7833 Koo, 1986, DNA bending at adenine thymine tracts, Nature, 320, 501, 10.1038/320501a0 Liu-Johnson, 1986, On the mechanism of the catabolite gene activator protein in stimulating transcription from the lac operon Lumkin, 1982, Mobility of DNA in gel electrophoresis, Biopolymers, 21, 2315, 10.1002/bip.360211116 Majors, 1977, Control of the E. coli lac operon at the molecular level Maxam, 1980, Sequencing end-labeled DNA with base-specific chemical cleavages, Methods Enzymol., 65, 499, 10.1016/S0076-6879(80)65059-9 McKay, 1981, Structure of catabolite gene activator protein at 2.9 Å resolution suggests binding to left-handed DNA, Nature, 290, 744, 10.1038/290744a0 Pabo, 1982, The operator-binding domain of λ repressor: structure and DNA recognition, Nature, 298, 443, 10.1038/298443a0 Revzin, 1986, Comparison of nucleic acid-protein interactions in solution and in polyacrylamide gels, Anal. Biochem., 153, 172, 10.1016/0003-2697(86)90077-1 Richmond, 1984, Structure of the nucleosome core particle at 7Å resolution, Nature, 311, 532, 10.1038/311532a0 Sanger, 1977, DNA sequencing with chain-terminating inhibitors, 74, 5463 Smith, 1980, DNA sequence analysis by primed synthesis, Methods Enzymol., 65, 560, 10.1016/S0076-6879(80)65060-5 Takahashi, 1983, On the origin of selectivity in recognition by cAMP receptor protein of its specific binding site of the lactose promoter region, J. Mol. Biol., 167, 895, 10.1016/S0022-2836(83)80118-1 Weber, 1984, Model of specific complex between catabolite gene activator protein and B-DNA suggested by electrostatic complementarity, 81, 3973 Wu, 1984, The locus of sequence-directed and protein-induced DNA bending, Nature, 308, 509, 10.1038/308509a0