Methanogenesis from acetate and propionate by thermophilic down-flow anaerobic packed-bed reactor
Tài liệu tham khảo
Ahring, 1995, Methanogenesis in thermophilic biogas reactors, Anton. Leeuw., 67, 91, 10.1007/BF00872197
Akarsubasi, 2005, Effect of wastewater composition on archaeal population diversity, Water Res., 39, 1576, 10.1016/j.watres.2004.12.041
Altschul, 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res., 25, 3389, 10.1093/nar/25.17.3389
Boone, 1989, Diffusion of the interspecies electron carriers H2 and formate in methanogenic ecosystems and its implications in the measurement of Km for H2 or formate uptake, Appl. Environ. Microbiol., 55, 1735, 10.1128/AEM.55.7.1735-1741.1989
Chauhan, 2005, Evaluation of support matrices for immobilization of anaerobic consortia for efficient carbon cycling in waste regeneration, Biochem. Biophys. Res. Commun., 327, 884, 10.1016/j.bbrc.2004.12.083
de Bok, 2005, The first true obligately syntrophic propionate-oxidizing bacterium, Pelotomaculum schinkii sp. nov., cocultured with Methanospirillum hungatei, and emended description of the genus Pelotomaculum, Int. J. Syst. Evol. Microbiol., 55, 1697, 10.1099/ijs.0.02880-0
Eighmy, 1996, U.S.A. national overview on waste management, Waste Manage., 16, 361, 10.1016/S0956-053X(96)00080-3
Felsenstein, 1985, Confidence limits of phylogenesis: an approach using the bootstrap, Evolution, 39, 783, 10.1111/j.1558-5646.1985.tb00420.x
Goto, M., 2000. In: Second Climate Technology Initiative/Industry Joint Seminar on Technology Diffusion in Asia, Session III-B, January 14–15, Cebu, Philippines.
Hattori, 2000, Thermacetogenium phaeum gen. nov., sp. nov., a strictly anaerobic, thermophilic, syntrophic acetate-oxidizing bacterium, Int. J. Syst. Evol. Microbiol., 50, 1601, 10.1099/00207713-50-4-1601
Hori, 2006, Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester, Appl. Environ. Microbiol., 72, 1623, 10.1128/AEM.72.2.1623-1630.2006
Hovey, 2005, DNA microarray analysis of Methanosarcina mazei Gö1 reveals adaptation to different methanogenic substrates, Mol. Genet. Genomics, 273, 225, 10.1007/s00438-005-1126-9
Imachi, 2000, Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydrogenotrophic methanogens in a thermophilic methanogenic granular sludge, Appl. Environ. Microbiol., 66, 3608, 10.1128/AEM.66.8.3608-3615.2000
Imachi, 2002, Pelotomaculum thermopropionicum gen. nov., an anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium, Int. J. Syst. Evol. Microbiol., 52, 1729
Kida, 1993, Accumulation of propionic acid during anaerobic treatment of distillery wastewater from barley-shochu making, J. Ferment. Bioeng., 75, 213, 10.1016/0922-338X(93)90118-R
Kimura, 1980, A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences, J. Mol. Evol., 16, 111, 10.1007/BF01731581
Kosaka, 2006, Reconstruction and regulation of the central catabolic pathway in the thermophilic propionate-oxidizing syntroph Pelotomaculum thermopropionicum, J. Bacteriol., 188, 202, 10.1128/JB.188.1.202-210.2006
Mah, 1991, Methanogenesis from propionate in sludge and enrichment systems, 99
Nilsen, 1996, Desulfotomaculum thermocisternum sp. nov., a sulfate reducer isolated from a hot North Sea oil reservoir, Int. J. Syst. Bacteriol., 46, 397, 10.1099/00207713-46-2-397
Plugge, 2002, Desulfotomaculum thermobenzoicum subsp. thermosyntrophicum subsp. nov., a thermophilic, syntrophic, propionate-oxidizing, spore-forming bacterium, Int. J. Syst. Evol. Microbiol., 52, 391, 10.1099/00207713-52-2-391
Pysz, 2004, Transcriptional analysis of biofilm formation processes in the anaerobic, hyperthermophilic bacterium Thermotoga maritima, Appl. Environ. Microbiol., 70, 6098, 10.1128/AEM.70.10.6098-6112.2004
Saitou, 1987, The neighbor-joining method: a new method for constructing phylogenetic trees, Mol. Biol. Evol., 4, 406
Schink, 1997, Energetics of syntrophic cooperation in methanogenic degradation, Microbiol. Mol. Rev., 61, 262, 10.1128/.61.2.262-280.1997
Schink, 2005, Syntrophism among prokaryotes
Shigematsu, 2004, Effect of dilution rate on metabolic pathway shift between aceticlastic and nonaceticlastic methanogenesis in chemostat cultivation, Appl. Environ. Microbiol., 70, 4048, 10.1128/AEM.70.7.4048-4052.2004
Shigematsu, 2006, Microbial community of a mesophilic propionate-degrading methanogenic consortium in chemostat cultivation analyzed based on 16S rRNA and acetate kinase genes, Appl. Microbiol. Biotechnol., 72, 401, 10.1007/s00253-005-0275-4
Sparling, 1997, Hydrogen production from inhibited anaerobic composters, Int. J. Hydrogen Energy, 22, 563, 10.1016/S0360-3199(96)00137-1
Tao, 1999, Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media, J. Bacteriol., 181, 6425, 10.1128/JB.181.20.6425-6440.1999
Tatara, 2005, High-rate thermophilic methane fermentation on short-chain fatty acids in a down-flow anaerobic packed-bed reactor, Bioprocess Biosyst. Eng., 27, 105, 10.1007/s00449-004-0387-8
Thompson, 1997, The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Res., 24, 4876, 10.1093/nar/25.24.4876
Ueda, 2004, Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism, Nucleic Acids Res., 32, 4937, 10.1093/nar/gkh830
Van Lier, 1993, Effect of acetate, propionate, and butyrate on the thermophilic anaerobic degradation of propionate by methanogenic sludge and defined cultures, Appl. Environ. Microbiol., 59, 1003, 10.1128/AEM.59.4.1003-1011.1993
Verrier, D., Mortier, B., Dubourguier, H.C., Albagnac, G., 1998. Adhesion of anaerobic bacteria to inert supports and development of methanogenic biofilms. In: Fifth International Symposium on Anaerobic Digestion, 22–26 May 1988, Bologna, Italy, pp. 61–69.
Weisburg, 1991, 16S ribosomal DNA amplification for phylogenetic study, J. Bacteriol., 173, 697, 10.1128/jb.173.2.697-703.1991
Yu, 2005, Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction, Biotechnol. Bioeng., 89, 670, 10.1002/bit.20347