Evolutionary implications of a rRNA-based phylogeny of Harpellales

Mycological Research - Tập 110 - Trang 1011-1024 - 2006
Merlin M. WHITE1
1Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas 66045-7534, USA

Tài liệu tham khảo

Benjamin, 1966, The merosporangium, Mycologia, 58, 1, 10.2307/3756986 Benjamin, 1979, Zygomycetes and their spores, Vol. 2.B, 573 Benny, 2000, Amoebidium parasiticum is a protozoan, not a Trichomycete, Mycologia, 92, 1133, 10.2307/3761480 Benny, 2001, The classification and phylogeny of Trichomycetes and Zygomycetes, 39 Berbee, 2001, Fungal molecular evolution: gene trees and geologic time Bergsten, 2005, A review of long-branch attraction, Cladistics, 21, 163, 10.1111/j.1096-0031.2005.00059.x Bremer, 1988, The limits of amino acid sequence data in angiosperm phylogenetic reconstruction, Evolution, 42, 795, 10.2307/2408870 Bruns, 1992, Evolutionary relationships within the Fungi: analyses of nuclear small subunit rRNA sequences, Molecular Phylogenetics and Evolution, 1, 231, 10.1016/1055-7903(92)90020-H Cafaro, 2003, Eccinales (Trichomycetes) are not fungi, but a novel clade of the class Mesomycetozoa, in the early divergence of animals and fungi, Inoculum, 54, 14 Cafaro, 2005, Eccrinales (Trichomycetes) are not fungi, but a clade of protists at the early divergence of animals and fungi, Molecular Phylogenetics and Evolution, 35, 21, 10.1016/j.ympev.2004.12.019 Cavalier-Smith, 1998, A revised six-kingdom system of life, Biological Reviews, 73, 203, 10.1017/S0006323198005167 Eriksson, 1999 Ferrington, 2003, A new genus of Trichomycetes from Dixa fluvica Peters (Diptera: Dixidae), Aquatic Insects, 25, 85, 10.1076/aqin.25.2.85.14039 Gottlieb, 2001, Molecular variation within and among species of Harpellales, Mycologia, 93, 66, 10.2307/3761606 Grigg, 1996, Isozyme patterns in cultured Harpellales, Mycologia, 88, 219, 10.2307/3760926 James, 2000, Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics, Canadian Journal of Botany, 78, 336, 10.1139/b00-009 Léger, 1929, Harpella melusinae n. g. sp. Entophyte eccriniforme parasite des larves de Simulie, Comptes Rendus Hebdomadaires des Séances de l'Académie des Sciences Paris, 188, 951 Lichtwardt, 1986 Lichtwardt, 1995, Biogeography and fungal systematics, Canadian Journal of Botany, 73, S731, 10.1139/b95-316 Lichtwardt, 1984, Zygopolaris borealis, a new gut fungus (Trichomycetes) living in aquatic mayfly larvae, Canadian Journal of Botany, 62, 1283, 10.1139/b84-173 Lichtwardt, 1990, Trichomycete gut fungi in Australian aquatic insect larvae, Canadian Journal of Botany, 68, 1057, 10.1139/b90-133 Lichtwardt, 1992, Tasmanian Trichomycete gut fungi in aquatic insect larvae, Mycologia, 84, 384, 10.2307/3760190 Lichtwardt, 1999, Trichomycetes in Argentinean aquatic insect larvae, Mycologia, 91, 1060, 10.2307/3761637 Lichtwardt RW, Cafaro MJ, White MM, 2001a. The Trichomycetes fungal associates of arthropods. http:nhm.ku.edu/∼fungi. Lichtwardt, 2001, Harpellales in Newfoundland aquatic insect larvae, Mycologia, 93, 764, 10.2307/3761832 Longcore, 1989, Bojamyces repens; a new genus and species of Harpellales (Trichomycetes) from a lentic mayfly, Mycologia, 81, 482, 10.2307/3760090 Misra, 1998, Trichomycetes — fungi associated with arthropods: review and world literature, Symbiosis, 42, 179 Misra, 1999, Furculomyces septentrionalis reveals an unexpected distribution for this genus of Harpellales, Mycologia, 91, 703, 10.2307/3761258 Moss, 1979, Commensalism of the Trichomycetes, 175 Moss, 1998, Harpellales (Trichomycetes); mycobionts of Insecta, Botanical Journal of Scotland, 50, 137, 10.1080/03746609808684911 Moss, 1977, Zygospores of the Harpellales: an ultrastructural study, Canadian Journal of Botany, 55, 3099, 10.1139/b77-351 Moss, 1978, Phyletic considerations of the Harpellales and Asellariales (Trichomycetes, Zygomycotina) and the Kickxellales (Zygomycetes, Zygomycotina), Mycologia, 70, 944, 10.2307/3759130 Moss, 1975, Zygopolaris, a new genus of Trichomycetes producing zygospores with polar attachment, Mycologia, 67, 120, 10.2307/3758234 O'Donnell, 1993, Fusarium and its near relatives, 225 O'Donnell, 1998, Phylogenetic relationships among the Harpellales and Kickxellales, Mycologia, 90, 624, 10.2307/3761222 O'Donnell, 1997, Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis, Mycologia, 89, 48, 10.2307/3761172 Peterson, 1987, Antigenic variation within and between populations of three genera of Harpellales (Trichomycetes), Transactions of the British Mycological Society, 88, 189, 10.1016/S0007-1536(87)80214-0 Pouzar, 1972, Genistella Léger et Gauthier vs. Genistella Ortega; a nomenclatural note, Folia Geobotanica et Phytotaxonomica, Praha, 7, 319, 10.1007/BF02854735 Sangar, 1972, Immunological studies on the fungal genus Smittium (Trichomycetes), Mycologia, 64, 342, 10.2307/3757837 Santamaria, 1997, Lancisporomyces, a new genus of Trichomycetes with lance-shaped zygospores, Mycologia, 89, 639, 10.2307/3761001 Santamaria, 1998, Two new species of Orphella from Spain, Mycological Research, 102, 174, 10.1017/S0953756297004607 Schuessler, 2001, A new fungal phylum, the Glomeromycota: phylogeny and evolution, Mycological Research, 105, 1413, 10.1017/S0953756201005196 Sekar, 1987, A rapid screening procedure for the identification of recombinant bacterial clones, Biotechniques, 5, 11 Slaymaker, 1997, Trichomycetes and their Chironomidae hosts, Bulletin of the North American Benthological Society, 14, 50 Slaymaker, 1999, [‘1998’] Chironomidae–Trichomycete associations: a literature review, Journal of the Kansas Entomological Society, 7, 490 Swofford DL, 1999. PAUP*4.0. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4.0. Sunderland, Massachusetts: Sinauer Associates. Tanabe, 2000, Molecular phylogeny of parasitic zygomycota (Dimargaritales, Zoopagales) based on nuclear small subunit ribosomal DNA sequences, Molecular Phytogenetics and Evolution, 15, 253, 10.1006/mpev.2000.0775 Thompson, 1997, The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Research, 24, 4876, 10.1093/nar/25.24.4876 Thompson, 1994, Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Research, 22, 4673, 10.1093/nar/22.22.4673 Ustinova, 2000, Hyaloraphidium curvatum is not a green alga, but a lower fungus; Amoebidium parasiticum is not a fungus, but a member of the DRIPS, Protist, 151, 253, 10.1078/1434-4610-00023 Valle, 2004, Bojamyces transfuga sp nov and new records of Trichomycetes from mayfly larvae in Spain, Mycologia, 96, 1386, 10.2307/3762155 Valle, 2005, Zygospores as evidence of sexual reproduction in the genus Orphella, Mycologia, 97, 1335, 10.3852/mycologia.97.6.1335 Vilgalys, 1990, Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species, Journal of Bacteriology, 172, 4238, 10.1128/jb.172.8.4238-4246.1990 Walker, 1984, 5 S ribosomal RNA sequences from Zygomycotina and evolutionary implications, Systematic and Applied Microbiology, 5, 448, 10.1016/S0723-2020(84)80002-8 Whisler, 1963, Observations on some new and unusual enterophilous Phycomycetes, Canadian Journal of Botany, 41, 887, 10.1139/b63-074 White, 1999, Legerioides, a new genus of Harpellales in isopods and other Trichomycetes from New England, USA, Mycologia, 91, 1021, 10.2307/3761634 White MM, 2002. Taxonomic and molecular systematic studies of the Harpellales (Trichomycetes) toward understanding the diversity, evolution and dispersal of gut fungi. PhD thesis, University of Kansas. White, 2004, Fungal symbionts (Harpellales) in Norwegian aquatic insect larvae, Mycologia, 96, 891, 10.2307/3762122 White, 2001, Taxonomy and systematics of Trichomycetes-past, present and future, 27 White, 2000, Arthropod gut fungi from Puerto Rico and summary of tropical Trichomycetes worldwide, Caribbean Journal of Science, 36, 210 White, 2006, Confirmation and identification of parasitic stages of obligate endobionts (Harpellales) in blackflies (Simuliidae) by means of rRNA sequence data, Mycological Research, 110, 1070, 10.1016/j.mycres.2006.06.008 White, 2006, Trichomycete insect symbionts in the Great Smoky Mountains National Park and vicinity, Mycologia, 98, 333, 10.3852/mycologia.98.2.333 White, 1990, Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, 315 Williams, 1999, Two new Harpellales living in Ephemeroptera nymphs in Colorado Rocky Mountain streams, Mycologia, 91, 400, 10.2307/3761386