Crystal structure of the cyanobacterial metallothionein repressor SmtB: a model for metalloregulatory proteins 1 1Edited by D. Rees
Tóm tắt
Từ khóa
Tài liệu tham khảo
Boyd, 1990, Molecular cloning and DNA sequence analysis of a diphtheria toxin iron-dependent regulatory element (dtxR) from Corynebacterium diphtheriae, Proc. Natl Acad. Sci. USA, 87, 5968, 10.1073/pnas.87.15.5968
Brünger, 1987, Crystallographic R factor refinement by molecular dynamics, Science, 235, 458, 10.1126/science.235.4787.458
Brünger, 1990, Slow-cooling protocols for crystallographic refinement by simulated annealing, Acta Crystallog. sect. A, 46, 585, 10.1107/S0108767390002355
Clark, 1993, Co-crystal structure of the HNF-3 fork head DNA-recognition motif resembles histone H5, Nature, 364, 412, 10.1038/364412a0
Cossart, 1982, Cloning and sequence of the crp gene of Escherichia coli K 12, Nucl. Acids Res., 10, 1363, 10.1093/nar/10.4.1363
Cowtan, 1994, ‘DM’ an automated procedure for phase improvement by density modification, vol. 31, 34
Endo, 1995, CadC, the transcriptional regulatory protein of the cadmium resistance system of Staphylococcus aureus plasmid pI258, J. Bacteriol, 177, 4437, 10.1128/jb.177.15.4437-4441.1995
Engh, 1991, Accurate bond and angle parameters for X-ray protein structure refinement, Acta Crystallog. sect. A, 47, 392, 10.1107/S0108767391001071
Erbe, 1995, Metalloregulation of the cyanobacterial smt locus, Nucl. Acids Res., 23, 2472, 10.1093/nar/23.13.2472
Helmann, 1989, Homologous metalloregulatory proteins from both gram-positive and gram-negative bacteria control transcription of mercury resistance operons, J. Bacteriol., 171, 222, 10.1128/jb.171.1.222-229.1989
Helmann, 1990, The MerR metalloregulatory protein binds mercuric ion as a tricoordinate, metal-bridged dimer, Science, 247, 946, 10.1126/science.2305262
Howard, 1987, The use of an imaging proportional counter in macromolelcular crystallography, J. Appl. Crystallog., 20, 383, 10.1107/S0021889887086436
Huckle, 1993, Isolation of prokaryotic metallothionein locus and analysis of transcriptional control by trace metal ions, Mol. Microbiol., 7, 177, 10.1111/j.1365-2958.1993.tb01109.x
Jiang, 1994, Protein hydration observed by X-ray diffraction; solvation properties of penicillopepsin and neuraminidase crystal structures, J. Mol. Biol., 243, 100, 10.1006/jmbi.1994.1633
Kar, 1997, The cyanobacterial repressor SmtB is predominantly a dimer and binds two Zn2+ ions per subunit
Kleywegt, 1993, Masks made easy, vol. 28, 58
Kleywegt, 1994, From the first map to final model, 59
Lai, 1991, Hepatocyte nuclear factor 3 alpha belongs to a gene family in mammals that is homologous to the Drosophila homeotic gene fork head, Genes Dev., 5, 416, 10.1101/gad.5.3.416
Liljas, 1972, Crystal structure of human carbonic anhydrase, C. Nature New Biol., 235, 131, 10.1038/newbio235131a0
Lipscomb, 1970, The structure of carboxypeptidase A. 8. Atomic interpretation at 0.2 nm resolution, a new study of the complex of glycyl-tyrosine with CPA, and mechanistic deductions, Phil. Trans. Roy. Soc. ser. B, 257, 177, 10.1098/rstb.1970.0020
Luzzati, 1952, Traitement statistique des erreurs dans la determination des structures cristallines, Acta Crystallog., 5, 802, 10.1107/S0365110X52002161
Matthews, 1968, Solvent content of protein crystals, J. Mol. Biol., 33, 491, 10.1016/0022-2836(68)90205-2
Morby, 1993, SmtB is a metal-dependent repressor of the cyanobacterial metallothionein gene smtA, Nucl. Acids Res., 21, 921, 10.1093/nar/21.4.921
O’Halloran, 1987, Metalloregulatory DNA-binding protein encoded by the merR gene, Science, 235, 211, 10.1126/science.3798107
Otwinoski, 1991, Maximum likelihood refinement of heavy atom parameters, 80
Qiu, 1995, Three-dimensional structure of the diphtheria toxin repressor in complex with divalent cation co-repressors, Structure, 3, 87, 10.1016/S0969-2126(01)00137-X
Ramakrishnan, 1993, Crystal structure of globular domain of histone H5 and its implications for nucleosome binding, Nature, 362, 219, 10.1038/362219a0
Read, 1986, Improved Fourier coefficients for maps using phases from partial structures with errors, Acta Crystallog. sect. A, 42, 140, 10.1107/S0108767386099622
Sack, 1988, CHAIN - a crystallographic modeling program, J. Mol. Graph, 6, 244, 10.1016/S0263-7855(98)80040-4
San Francisco, 1990, Identification of the metalloregulatory element of the plasmid encoded arsenical resistance operon, Nucl. Acids Res., 18, 619, 10.1093/nar/18.3.619
Schiering, 1995, Structures of the apo- and the metal ion-activated forms of the diphtheria tox repressor from Corynebacterium diphtheriae, Proc. Natl Acad. Sci. USA, 92, 9843, 10.1073/pnas.92.21.9843
Sedlmeier, 1992, Cloning and DNA sequence analysis of the mercury resistance of Streptomyces lividans, Mol. Gen. Genet., 236, 76, 10.1007/BF00279645
Shi, 1994, Identification of a putative metal binding site in a new family of metalloregulatory proteins, J. Biol. Chem., 269, 19826, 10.1016/S0021-9258(17)32094-X
Shi, 1996, The role of arsenic-thiol interactions in metalloregulation of the ars operon, J. Biol. Chem., 271, 9291, 10.1074/jbc.271.16.9291
Silver, 1994, Newer systems for bacterial resistances to toxic heavy metals, Environ. Health Perspect., 102, 107, 10.1289/ehp.94102s3107
Thomas, 1992, Cooperative binding of the globular domains of histones H1 and H5 to DNA, Nucl. Acids Res., 20, 187, 10.1093/nar/20.2.187
Turner, 1996, Zn2+-sensing by the cyanobacterial metallothionein repressor SmtB, Nucl. Acids Res., 24, 3714, 10.1093/nar/24.19.3714
Vallee, 1995, Zinc metallochemistry in biochemistry, EXS, 73, 259
Wintjens, 1996, Structural classification of HTH DNA-binding domains and protein-DNA interaction modes, J. Mol. Biol., 262, 294, 10.1006/jmbi.1996.0514