Characterisation of T cell antigen receptor α chain isotypes in the common carp

Davis, 1988, T-cell antigen receptor genes and T-cell recognition, Nature, 334, 395, 10.1038/334395a0 Malissen, 1992, Regulation of TCR α and β gene allelic exclusion during T-cell development, Immunol Today, 13, 315, 10.1016/0167-5699(92)90044-8 Gascoigne, 1999, Allelic exclusion of the T cell receptor α-chain: developmental regulation of a post-translational event, Semin Immunol, 11, 337, 10.1006/smim.1999.0190 Koop, 1994, The human T-cell receptor TCRAC/TCRDC (Cα/Cδ) region: organization, sequence, and evolution of 97.6 kb of DNA, Genomics, 19, 478, 10.1006/geno.1994.1097 Nam, 2003, The four TCR genes of teleost fish: the cDNA and genomic DNA analysis of Japanese flounder (Paralichthys olivaceus) TCR α-, β-, γ-, and δ-chains, J Immunol, 170, 3081, 10.4049/jimmunol.170.6.3081 Wang, 2001, Characterization of the Japanese pufferfish (Takifugu rubripes) T-cell receptor α locus reveals a unique genomic organization, Immunogenetics, 53, 31, 10.1007/s002510100298 Fischer, 2002, Conservation of the T-cell receptor α/δ linkage in the teleost fish Tetraodon nigroviridis, Genomics, 79, 241, 10.1006/geno.2002.6688 Partula, 1996, Structure and diversity of the TCR α-chain in a teleost fish, J Immunol, 157, 207 Wilson, 1998, T-cell receptors in channel catfish: structure and expression of TCR α and β genes, Mol Immunol, 35, 545, 10.1016/S0161-5890(98)00037-6 Haire, 2000, Characterization of three isotypes of immunoglobulin light chains and T-cell antigen receptor α in zebrafish, Immunogenetics, 51, 915, 10.1007/s002510000229 Criscitiello, 2004, Allelic polymorphism of T-cell receptor constant domains is widespread in fishes, Immunogenetics, 55, 818, 10.1007/s00251-004-0652-7 Danilova, 2004, T cells and the thymus in developing zebrafish, Dev Comp Immunol, 28, 755, 10.1016/j.dci.2003.12.003 Wermenstam, 2001, T-cell antigen receptors in Atlantic cod (Gadus morhua L.): structure, organisation and expression of TCR α and β genes, Dev Comp Immunol, 25, 117, 10.1016/S0145-305X(00)00049-5 Rast, 1995, Identification and characterization of T-cell antigen receptor-related genes in phylogenetically diverse vertebrate species, Immunogenetics, 42, 204, 10.1007/BF00191226 Criscitiello, 2004, Allelic polymorphism of TCRα chain constant domain genes in the bicolor damselfish, Dev Comp Immunol, 28, 781, 10.1016/j.dci.2003.12.004 Hordvik, 2004, Structure and organization of the T cell receptor alpha chain genes in Atlantic salmon, Mol Immunol, 41, 553, 10.1016/j.molimm.2004.03.006 Charlemagne, 1998, T-cell receptors in ectothermic vertebrates, Immunol Rev, 166, 87, 10.1111/j.1600-065X.1998.tb01255.x Kamper, 2002, Polymorphism and evolution in the constant region of the T-cell receptor beta chain in an advanced teleost fish, Immunogenetics, 53, 1047, 10.1007/s00251-001-0422-8 Zhou, 2003, The T cell receptor β locus of the channel catfish, Ictalurus punctatus, reveals unique features, J Immunol, 170, 2573, 10.4049/jimmunol.170.5.2573 Gascoigne, 1984, Genomic organization and sequence of T-cell receptor β-chain constant- and joining-region genes, Nature, 310, 387, 10.1038/310387a0 Malissen, 1984, Mouse T cell antigen receptor: structure and organization of constant and joining gene segments encoding the β polypeptide, Cell, 37, 1101, 10.1016/0092-8674(84)90444-6 Rowen, 1996, The complete 685-kilobase DNA sequence of the human β T cell receptor locus, Science, 272, 1755, 10.1126/science.272.5269.1755 Nakao, 1998, Isolation of cDNA encoding the constant region of the immunoglobulin heavy-chain from common carp (Cyprinus carpio L.), Fish Shellfish Immunol, 8, 425, 10.1006/fsim.1998.0149 Tomana, 1999, Isolation of cDNA encoding immunoglobulin light chain from common carp (Cyprinus carpio L.), Fish Shellfish Immunol, 9, 71, 10.1006/fsim.1998.0175 Tomana, 2002, Characterization of immunoglobulin light chain isotypes in the common carp, Immunogenetics, 54, 120, 10.1007/s00251-002-0447-7 Ishikawa, 2004, Characterisation of a fourth immunoglobulin light chain isotype in the common carp, Fish Shellfish Immunol, 16, 369, 10.1016/j.fsi.2003.06.002 Ford, 1994, Chimeric molecules created by gene amplification interfere with the analysis of somatic hypermutation of murine immunoglobulin genes, Gene, 142, 279, 10.1016/0378-1119(94)90275-5 Sanger, 1977, DNA sequencing with chain-terminating inhibitors, Proc Natl Acad Sci U S A, 74, 5463, 10.1073/pnas.74.12.5463 Pearson, 1988, Improved tools for biological sequence comparison, Proc Natl Acad Sci U S A, 85, 2444, 10.1073/pnas.85.8.2444 Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res, 22, 4673, 10.1093/nar/22.22.4673 Sambrook, 1989 Lefranc, 2003, IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains, Dev Comp Immunol, 27, 55, 10.1016/S0145-305X(02)00039-3 Hirokawa, 1998, SOSUI: classification and secondary structure prediction system for membrane proteins, Bioinformatics, 14, 378, 10.1093/bioinformatics/14.4.378 Campbell, 1994, CART: a conserved antigen receptor transmembrane motif, Semin Immunol, 6, 393, 10.1006/smim.1994.1049 Blumberg, 1990, Assembly and function of the T cell antigen receptor. Requirement of either the lysine or arginine residues in the transmembrane region of the α chain, J Biol Chem, 265, 14036, 10.1016/S0021-9258(18)77453-X John, 1989, Surface expression of the T cell receptor complex requires charged residues within the α chain transmembrane region, Eur J Immunol, 19, 335, 10.1002/eji.1830190218 Haire, 2002, Structure and diversity of T-lymphocyte antigen receptors alpha and gamma in Xenopus, Immunogenetics, 54, 431, 10.1007/s00251-002-0474-4 Ohno, 1967, Diploid-tetraploid relationship among old-world members of the fish family Cyprinidae, Chromosoma, 23, 1, 10.1007/BF00293307 Ojima, 1967, Cytogenetic studies in lower vertebrates, IV. A note on the chromosomes of the carp (Cyprinus carpio) in comparison with those of the funa and the goldfish (Carassius auratus), Jpn J Genet, 42, 163, 10.1266/jjg.42.163 Raicu, 1972, Diploid chromosome complement of the carp, Cytologia, 37, 355, 10.1508/cytologia.37.355 Wolf, 1969, Polyploidization in the fishes family Cyprinidae, Order Cypriniformes, Humangenetik, 7, 240 David, 2003, Recent duplication of the common carp (Cyprinus carpio L.) genome as revealed by analyses of microsatellite loci, Mol Biol Evol, 20, 1425, 10.1093/molbev/msg173 Van de Peer, 2003, Are all fishes ancient polyploids?, J Struct Funct Genomics, 3, 65, 10.1023/A:1022652814749 Alam, 1998, Posttranslational regulation of TCR Vα allelic exclusion during T cell differentiation, J Immunol, 160, 3883 Couez, 1991, Each of the two productive T cell receptor α-gene rearrangements found in both the A10 and BM 3.3 T cell clones give rise to an α chain which can contribute to the constitution of a surface-expressed αβ dimer, Int Immunol, 3, 719, 10.1093/intimm/3.7.719 Romano, 1997, Leucocyte subpopulations in developing carp (Cyprinus carpio L.): immunocytochemical studies, Fish Shellfish Immunol, 7, 439, 10.1006/fsim.1997.0097