First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend surveillance

Riordan, 2007, Human infection with Fusobacterium necrophorum (Necrobacillosis), with a focus on Lemierre's syndrome, Clin. Microbiol. Rev., 20, 622, 10.1128/CMR.00011-07 Brook, 2013, Antianaerobic antimicrobials: spectrum and susceptibility testing, Clin. Microbiol. Rev., 26, 526, 10.1128/CMR.00086-12 Schuetz, 2014, Antimicrobial resistance and susceptibility testing of anaerobic bacteria, Clin. Infect. Dis., 59, 698, 10.1093/cid/ciu395 Woerther, 2021, Is the term "anti-anaerobic" still relevant?, Int. J. Infect. Dis., 102, 178, 10.1016/j.ijid.2020.10.052 Aldridge, 2001, Multicenter survey of the changing in vitro antimicrobial susceptibilities of clinical isolates of Bacteroides fragilis group, Prevotella, Fusobacterium, Porphyromonas, and Peptostreptococcus species, Antimicrob. Agents Chemother., 45, 1238, 10.1128/AAC.45.4.1238-1243.2001 Nyfors, 2003, Emergence of penicillin resistance among Fusobacterium nucleatum populations of commensal oral flora during early childhood, J. Antimicrob. Chemother., 51, 107, 10.1093/jac/dkg022 Koeth, 2004, Surveillance of susceptibility patterns in 1297 European and US anaerobic and capnophilic isolates to co-amoxiclav and five other antimicrobial agents, J. Antimicrob. Chemother., 53, 1039, 10.1093/jac/dkh248 Liu, 2008, Increasing trends in antimicrobial resistance among clinically important anaerobes and Bacteroides fragilis isolates causing nosocomial infections: emerging resistance to carbapenems, Antimicrob. Agents Chemother., 52, 3161, 10.1128/AAC.00355-08 Afra, 2013, Incidence, risk factors, and outcomes of Fusobacterium species bacteremia, BMC Infect. Dis., 13, 264, 10.1186/1471-2334-13-264 Wang, 2014, Trends in the susceptibility of commonly encountered clinically significant anaerobes and susceptibilities of blood isolates of anaerobes to 16 antimicrobial agents, including fidaxomicin and rifaximin, 2008-2012, northern Taiwan, Eur. J. Clin. Microbiol. Infect. Dis., 33, 2041, 10.1007/s10096-014-2175-y Ng, 2015, Anaerobic bacteraemia revisited: species and susceptibilities, Ann. Acad. Med. Singapore, 44, 13, 10.47102/annals-acadmedsg.V44N1p13 Tan, 2017, Clinical characteristics and antimicrobial susceptibilities of anaerobic bacteremia in an acute care hospital, Anaerobe, 43, 69, 10.1016/j.anaerobe.2016.11.009 Byun, 2019, Antimicrobial susceptibility patterns of anaerobic bacterial clinical isolates from 2014 to 2016, including recently named or renamed species, Ann Lab Med, 39, 190, 10.3343/alm.2019.39.2.190 Brazier, 2002, Fusobacterium necrophorum infections in England and Wales 1990-2000, J. Med. Microbiol., 51, 269, 10.1099/0022-1317-51-3-269 Jensen, 2008, Minimum requirements for a rapid and reliable routine identification and antibiogram of Fusobacterium necrophorum, Eur. J. Clin. Microbiol. Infect. Dis., 27, 557, 10.1007/s10096-008-0468-8 Kim, 2022, Clinical differences in patients infected with Fusobacterium and antimicrobial susceptibility of Fusobacterium isolates recovered at a tertiary-care hospital in Korea, Ann. Lab. Med., 42, 188, 10.3343/alm.2022.42.2.188 Alauzet, 2019, Metronidazole resistance and nim genes in anaerobes: a review, Anaerobe, 55, 40, 10.1016/j.anaerobe.2018.10.004 Katsandri, 2006, Dissemination of nim-class genes, encoding nitroimidazole resistance, among different species of Gram-negative anaerobic bacteria isolated in Athens, Greece, J. Antimicrob. Chemother., 58, 705, 10.1093/jac/dkl285 Voha, 2006, Genetic and biochemical characterization of FUS-1 (OXA-85), a narrow-spectrum class D beta-lactamase from Fusobacterium nucleatum subsp. polymorphum, Antimicrob. Agents Chemother., 50, 2673, 10.1128/AAC.00058-06 Rôças, 2012, Antibiotic resistance genes in anaerobic bacteria isolated from primary dental root canal infections, Anaerobe, 18, 576, 10.1016/j.anaerobe.2012.10.001 Binta, 2016, Detection of cfxA2, cfxA3, and cfxA6 genes in beta-lactamase producing oral anaerobes, J. Appl. Oral Sci., 24, 142, 10.1590/1678-775720150469 Roberts, 2003, Acquired tetracycline and/or macrolide-lincosamides-streptogramin resistance in anaerobes, Anaerobe, 9, 63, 10.1016/S1075-9964(03)00058-1 Chopra, 2021 Bista, 2022, Comparative genomic analysis of Fusobacterium necrophorum provides insights into conserved virulence genes, Microbiol. Spectr., 10.1128/spectrum.00297-22 Brown, 2016, sourmash: a library for MinHash sketching of DNA, J. Open Source Softw., 1, 27, 10.21105/joss.00027 2012 Gordon, 2014, Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing, J. Clin. Microbiol., 52, 1182, 10.1128/JCM.03117-13 Warburton, 2009, Characterization of tet(32) genes from the oral metagenome, Antimicrob. Agents Chemother., 53, 273, 10.1128/AAC.00788-08 Martin, 1986, Nucleotide sequence of the tetM tetracycline resistance determinant of the streptococcal conjugative shuttle transposon Tn1545, Nucleic Acids Res., 14, 7047, 10.1093/nar/14.17.7047 Brantl, 1994, Complete nucleotide sequence of plasmid pGB3631, a derivative of the Streptococcus agalactiae plasmid pIP501, Gene, 142, 155, 10.1016/0378-1119(94)90372-7 Seppälä, 1998, A novel erythromycin resistance methylase gene (ermTR) in Streptococcus pyogenes, Antimicrob. Agents Chemother., 42, 257, 10.1128/AAC.42.2.257 Croucher, 2011, Rapid pneumococcal evolution in response to clinical interventions, Science, 331, 430, 10.1126/science.1198545 Melville, 2001, Novel tetracycline resistance gene, tet(32), in the Clostridium-related human colonic anaerobe K10 and its transmission in vitro to the rumen anaerobe Butyrivibrio fibrisolvens, Antimicrob. Agents Chemother., 45, 3246, 10.1128/AAC.45.11.3246-3249.2001 Johnsen, 2017, Erm gene distribution among Norwegian Bacteroides isolates and evaluation of phenotypic tests to detect inducible clindamycin resistance in Bacteroides species, Anaerobe, 47, 226, 10.1016/j.anaerobe.2017.06.004 Copsey-Mawer, 2021, UK Bacteroides species surveillance survey: change in antimicrobial resistance over 16 years (2000-2016), Anaerobe, 72, 102447, 10.1016/j.anaerobe.2021.102447 König, 2021, Surveillance of antimicrobial susceptibility of anaerobe clinical isolates in southeast Austria: Bacteroides fragilis group is on the Fast track to resistance, Antibiotics, 10, 479, 10.3390/antibiotics10050479 Gajdács, 2017, Identification and antimicrobial susceptibility testing of anaerobic bacteria: rubik's cube of clinical microbiology?, Antibiotics, 6, 25, 10.3390/antibiotics6040025 Clewell, 1995, Unconstrained bacterial promiscuity: the Tn916-Tn1545 family of conjugative transposons, Trends Microbiol., 3, 229, 10.1016/S0966-842X(00)88930-1 Caddey, 2021, Identification and quantification of bovine digital dermatitis-associated microbiota across lesion stages in feedlot beef cattle, mSystems, 6, 10.1128/mSystems.00708-21