Isolation of a new butanol-producing Clostridium strain: High level of hemicellulosic activity and structure of solventogenesis genes of a new Clostridium saccharobutylicum isolate

Antoni, 2007, Biofuels from microbes, Appl. Microbiol. Biotechnol., 77, 23, 10.1007/s00253-007-1163-x Barry, 1991, The 16S/23S ribosomal spacer region as a target for DNA probes to identify eubacteria, PCR Methods Appl., 1, 51, 10.1101/gr.1.1.51 Bennett, 1995, The central metabolic pathway from acetyl-CoA to butyryl-CoA dehydrogenase in Clostridium acetobutylicum ATCC824, FEMS Microbiol. Rev., 17, 241, 10.1111/j.1574-6976.1995.tb00208.x Berezina, 2008, Extracellular glycosyl hydrolase activity of the Clostridium strains producing acetone, butanol, and ethanol, Appl. Biochem. Microbiol., 44, 42, 10.1134/S0003683808010079 Boynton, 1996, Cloning, sequencing, and expression of clustered genes encoding beta-hydroxybutyryl-coenzyme A (CoA) dehydrogenase, crotonase, and butyryl-CoA dehydrogenase from Clostridium acetobutylicum ATCC824, J. Bacteriol., 178, 3015, 10.1128/jb.178.11.3015-3024.1996 Bradford, 1976, A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Anal. Biochem., 72, 248, 10.1016/0003-2697(76)90527-3 Brockman, 1975, Electron-transferring flavoprotein of Peptostreptococcus elsdenii that functions in the reduction of acrylyl-coenzyme A, J. Bacteriol., 124, 1447, 10.1128/JB.124.3.1447-1453.1975 Gerischer, 1990, Cloning, sequencing, and molecular analysis of the acetoacetate decarboxylase gene region from Clostridium acetobutylicum, J. Bacteriol., 172, 6907, 10.1128/jb.172.12.6907-6918.1990 Gerischer, 1992, mRNA analysis of the adc gene region of Clostridium acetobutylicum during the shift to solventogenesis, J. Bacteriol., 174, 426, 10.1128/jb.174.2.426-433.1992 Ghose, 1987, Measurement of cellulase activities, Pure Appl. Chem., 59, 257, 10.1351/pac198759020257 Diez-Gonzalez, 1997, NAD-independent lactate and butyryl-CoA dehydrogenases of Clostridium acetobutylicum P262, Curr. Microbiol., 34, 162, 10.1007/s002849900162 Dürre, 1995, Solventogenic enzymes of Clostridium acetobutylicum: catalytic properties, genetic organization, and transcriptional regulation, FEMS Microbiol. Rev., 17, 251, 10.1016/0168-6445(95)00006-X Jones, 1995, Origins and relationships of industrial solvent-producing clostridial strains, FEMS Microbiol. Rev., 17, 223, 10.1111/j.1574-6976.1995.tb00206.x Keis, 1995, Taxonomy and phylogeny of industrial solvent-producing clostridia, Int. J. Syst. Bacteriol., 45, 693, 10.1099/00207713-45-4-693 Keis, 2001, Emended descriptions of Clostridium acetobutylicum and Clostridium beijerinckii, and descriptions of Clostridium saccharoperbutylacetonicum sp. nov. and Clostridium saccharobutylicum sp. nov, Int. J. Syst. Evol. Microbiol., 51, 2095, 10.1099/00207713-51-6-2095 Keis, 2001, Physical and genetic map of the Clostridium saccharobutylicum (formerly Clostridium acetobutylicum) NCP262 chromosome, Microbiology, 147, 1909, 10.1099/00221287-147-7-1909 Kosaka, 2007, Characterization of the sol operon in butanol-hyperproducing Clostridium saccharoperbutylacetonicum strain N1-4 and its degeneration mechanism, Biosci. Biotechnol. Biochem., 71, 58, 10.1271/bbb.60370 Lehman, 1990, An acyl coenzyme A dehydrogenase assay utilizing the ferricenium ion, Anal. Biochem., 168, 280, 10.1016/0003-2697(90)90080-S Long, 1984, Initiation of solvent production, clostridial stage and endospore formation in Clostridium acetobutylicum P262, Appl. Environ. Microbiol., 20, 256 Montoya, 2000, Isolation of mesophilic solvent-producing clostridia from Colombian sources: physiological characterization, solvent production and polysaccharide hydrolysis, J. Biotechnol., 79, 117, 10.1016/S0168-1656(00)00218-2 Nair, 1994, Molecular characterization of an aldehyde/alcohol dehydrogenase gene from Clostridium acetobutylicum ATCC824, J. Bacteriol., 176, 871, 10.1128/jb.176.3.871-885.1994 Palosaari, 1988, Purification and properties of the inducible coenzyme A-linked butyraldehyde dehydrogenase from Clostridium acetobutylicum, J. Bacteriol., 170, 2971, 10.1128/jb.170.7.2971-2976.1988 Sambrook, 1989 Schwarz, 2006, Butanol-rediscovering a renewable fuel, BioWorld Europe, 1, 16 Shaheen, 2000, Comparative fermentation studies of industrial strains belonging to four species of solvent-producing clostridia, J. Mol. Microbiol. Biotechnol., 2, 115 Song, 2002, Use of 16S–23S rRNA spacer-region (SR)-PCR for identification of intestinal Clostridia, Syst. Appl. Microbiol., 25, 528, 10.1078/07232020260517661 Stackebrandt, 1994, Taxonomic note: a place for DNA–DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology, Int. J. Syst. Bacteriol., 44, 846, 10.1099/00207713-44-4-846 Youngleson, 1989, Molecular analysis and nucleotide sequence of the adh-1 gene encoding an NADPH-dependent butanol dehydrogenase in the Gram-positive anaerobe Clostridium acetobutylicum, Gene, 78, 355, 10.1016/0378-1119(89)90238-2 Youngleson, 1995, Structure and transcription of genes within the P-hbd-adhl region of Clostridium acetobutylicum P262, FEMS Microbiol. Lett., 125, 185 Youngleson, 1988, Cloning and expression of a Clostridium acetobutylicum alcohol dehydrogenase gene in Escherichia coli, Appl. Environ. Microbiol., 54, 676, 10.1128/AEM.54.3.676-682.1988 Woods, 1995, Regulation of nitrogen metabolism, starch utilisation and the beta-hbd-adh1 gene cluster in Clostridium acetobutylicum, FEMS Microbiol. Rev., 17, 299 Zverlov, 1998, Properties and gene structure of a bifunctional cellulolytic enzyme (celA) from the extreme thermophile Anaerocellum thermophilum with separate glycosyl hydrolase family 9 and 48 catalytic domains, Microbiology, 144, 457, 10.1099/00221287-144-2-457 Zverlov, 2006, Bacterial acetone and butanol production by industrial fermentation in the Soviet Union: use of hydrolyzed agricultural waste for biorefinery, Appl. Microbiol. Biotechnol., 71, 587, 10.1007/s00253-006-0445-z