Different tobacco retrotransposons are specifically modulated by the elicitor cryptogein and reactive oxygen species
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Amelot, 2011, Cryptogein, a fungal elicitor, remodels the phenylpropanoid metabolism of tobacco cell suspension cultures in a calcium-dependent manner, Plant Cell Environ, 34, 149, 10.1111/j.1365-3040.2010.02233.x
Apel, 2004, Reactive oxygen species: Metabolism, oxidative stress, and signal transduction, Annu Rev Plant Biol, 55, 373, 10.1146/annurev.arplant.55.031903.141701
de Araujo, 2005, Transcriptionally active transposable elements in recent hybrid sugarcane, Plant J, 44, 707, 10.1111/j.1365-313X.2005.02579.x
Beguiristain, 2001, Three Tnt1 subfamilies show different stress-associated patterns of expression in tobacco. Consequences for retrotransposon control and evolution in plants, Plant Physiol, 127, 212, 10.1104/pp.127.1.212
Bui, 2012, LTR retrotransposons as controlling elements of genome response to stress?, 273
Casacuberta, 1995, Sequence variability within the tobacco retrotransposon Tnt1 population, EMBO J, 14, 2670, 10.1002/j.1460-2075.1995.tb07265.x
Deloger, 2013, Queenti, a novel copia-type retrotransposon of tobacco, Repbase Reports, 13, 1638
Devos, 2010, Grass genome organization and evolution, Curr Opin Plant Biol, 13, 139, 10.1016/j.pbi.2009.12.005
Estep, 2013, The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution, Heredity, 110, 194, 10.1038/hdy.2012.99
Frost, 2010, MOV10L1 is necessary for protection of spermatocytes against retrotransposons by Piwi-interacting RNAs, Proc Natl Acad Sci U S A, 107, 11847, 10.1073/pnas.1007158107
Gadjev, 2008, Programmed cell death in plants: New insights into redox regulation and the role of hydrogen peroxide, Int Rev Cell Mol Biol, 270, 87, 10.1016/S1937-6448(08)01403-2
Garcia-Brugger, 2006, Early signaling events induced by elicitors of plant defenses, Mol Plant Microbe Interact, 19, 711, 10.1094/MPMI-19-0711
Grandbastien, 2005, Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae, Cytogenet Genome Res, 110, 229, 10.1159/000084957
Grandbastien, 1989, Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics, Nature, 337, 376, 10.1038/337376a0
Grandbastien, 1998, Activation of plant retrotransposons under stress conditions, Trends Plant Sci, 3, 181, 10.1016/S1360-1385(98)01232-1
Hirochika, 2000, Silencing of retrotransposons in arabidopsis and reactivation by the ddm1 mutation, Plant Cell, 12, 357, 10.1105/tpc.12.3.357
Hirochika, 1993, Activation of tobacco retrotransposons during tissue culture, EMBO J, 12, 2521, 10.1002/j.1460-2075.1993.tb05907.x
Huang, 2007, Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice, Plant Physiol, 144, 1508, 10.1104/pp.107.099473
Kashkush, 2003, Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat, Nat Genet, 33, 102, 10.1038/ng1063
Kashkush, 2007, Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes, Genetics, 177, 1975, 10.1534/genetics.107.080234
Kumar, 1999, Plant retrotransposons, Annu Rev Genet, 33, 479, 10.1146/annurev.genet.33.1.479
Landers, 2001, Initial sequencing and analysis of the human genome, Nature, 409, 860, 10.1038/35057062
Lebrun-Garcia, 1999, Involvement of plasma membrane proteins in plant defense responses. Analysis of the cryptogein signal transduction in tobacco, Biochimie, 81, 663, 10.1016/S0300-9084(99)80123-0
Levine, 1994, H2O2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response, Cell, 79, 583, 10.1016/0092-8674(94)90544-4
Llorca, 2014, Maren Potschin M, Zentgraf U. bZIPs and WRKYs: Two large transcription factor families executing two different functional strategies, Front Plant Sci, 5, 1, 10.3389/fpls.2014.00169
Lherminier, 2009, NADPH oxidase-mediated reactive oxygen species production: Subcellular localization and reassessment of its role in plant defense, Mol Plant Microbe Interact, 22, 868, 10.1094/MPMI-22-7-0868
McClintock, 1984, The significance of responses of the genome to challenge, Science, 226, 792, 10.1126/science.15739260
Melayah, 2001, The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors, Plant J, 28, 159, 10.1046/j.1365-313X.2001.01141.x
Milat, 1991, Capsidiol and ethylene production by tobacco cells in response to cryptogein, an elicitor from Phytophthora cryptogea, Phytochemistry, 30, 2171, 10.1016/0031-9422(91)83608-N
Miller, 2008, Reactive oxygen signaling and abiotic stress, Physiol Plantarum, 133, 481, 10.1111/j.1399-3054.2008.01090.x
Mirouze, 2011, Epigenetic contribution to stress adaptation in plants, Curr Opin Plant Biol, 14, 267, 10.1016/j.pbi.2011.03.004
Mittler, 2004, Reactive oxygen gene network of plants, Trends Plant Sci, 9, 490, 10.1016/j.tplants.2004.08.009
Moreau-Mhiri, 1996, Regulation of expression of the tobacco Tnt1 retrotransposon in heterologous species following pathogen-related stresses, Plant J, 9, 409, 10.1046/j.1365-313X.1996.09030409.x
Noutsopoulos, 2010, VL30 retrotransposition signals activation of a caspase-independent and p53-dependent death pathway associated with mitochondrial and lysosomal damage, Cell Res, 20, 553, 10.1038/cr.2010.48
Parisod, 2012, Differential dynamics of transposable elements during long-term diploidization of Nicotiana section Repandae (Solanaceae) allopolyploid genomes, PLoS ONE, 7, e50352, 10.1371/journal.pone.0050352
Pérez-Hormaeche, 2008, Invasion of the Arabidopsis genome by the tobacco retrotransposon Tnt1 is controlled by reversible transcriptional gene silencing, Plant Physiol, 147, 1264, 10.1104/pp.108.117846
Petit, 2007, Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum), Mol Genet Genomics, 278, 1, 10.1007/s00438-007-0226-0
Pfaffl, 2001, A new mathematical model for relative quantification in real-time RT-PCR, Nucleic Acids Res, 29, e45, 10.1093/nar/29.9.e45
Ponchet, 1999, Are elicitins cryptograms in plant-oomycete communications?, Cell Mol Life Sci, 56, 1020, 10.1007/s000180050491
Pouteau, 1994, Microbial elicitors of plant defense responses activate transcription of a retrotransposon, Plant J, 5, 535, 10.1046/j.1365-313X.1994.5040535.x
Ramírez, 2013, Transcript profiling of common bean nodules subjected to oxidative stress, Physiol Plantarum, 149, 389
Ricci, 1989, Structure and activity of proteins from pathogenic fungi Phytophthora eliciting necrosis and acquired resistance in tobacco, Eur J Biochem, 183, 555, 10.1111/j.1432-1033.1989.tb21084.x
Ricci, 1997, Induction of the hypersensitive response and systemic acquired resistance by fungal proteins: The case of elicitins, 53
Ririe, 1997, Product differentiation by analysis of DNA melting curves during the polymerase chain reaction, Anal Biochem, 245, 154, 10.1006/abio.1996.9916
Rusterucci, 1996, Relationship between active oxygen species, lipid peroxidation, necrosis, and phytoalexin production induced by elicitins in nicotiana, Plant Physiol, 111, 885, 10.1104/pp.111.3.885
Sagi, 2006, Production of reactive oxygen species by plant NADPH oxidases, Plant Physiol, 141, 336, 10.1104/pp.106.078089
Schmidt, 2011, Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress, Mol Genet Genomics, 283, 233, 10.1007/s00438-010-0511-1
Simon-Plas, 2002, The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells, Plant J, 31, 137, 10.1046/j.1365-313X.2002.01342.x
Simon-Plas, 1997, Active oxygen species production in tobacco cells elicited by cryptogein, Plant Cell Environ, 20, 1573, 10.1046/j.1365-3040.1997.d01-45.x
Stoycheva, 2010, The role of reactive oxygen species in the induction of Ty1 retrotransposition in Saccharomyces cerevisiae, Yeast, 27, 259, 10.1002/yea.1749
Sugimoto, 2000, MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes, Plant Cell, 12, 2511, 10.1105/tpc.12.12.2511
Takeda, 1999, A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors, Plant J, 18, 383, 10.1046/j.1365-313X.1999.00460.x
Takeda, 2001, Linear DNA intermediates of the Tto1 retrotransposon in Gag particles accumulated in stressed tobacco and Arabidopsis thaliana, Plant J, 28, 307, 10.1046/j.1365-313X.2001.01151.x
Torres, 2006, Reactive oxygen species signaling in response to pathogens, Plant Physiol, 141, 373, 10.1104/pp.106.079467
Vandenabeele, 2003, A comprehensive analysis of hydrogen peroxide-induced gene expression in tobacco, Proc Natl Acad Sci U S A, 100, 16113, 10.1073/pnas.2136610100
Vernhettes, 1997, In vivo characterization of transcriptional regulatory sequences involved in the defence-associated expression of the tobacco retrotransposon Tnt1, Plant Mol Biol, 35, 673, 10.1023/A:1005826605598
Wrzaczek, 2013, ROS signaling loops—production, perception, regulation, Curr Opin Plant Biol, 16, 575, 10.1016/j.pbi.2013.07.002