Structure of 5S rRNA in actinomycetes and relatives and evolution of eubacteria
Tóm tắt
Từ khóa
Tài liệu tham khảo
Böhm S, Fabian H, Welfle H (1982) Universal structural features of prokaryotic and eukaryotic ribosomal 5 S RNA derived from comparative analysis of their sequences. Acta Biol Med Ger 41:1–16
Dams E, Vandenberghe A, De Wachter R (1983) Sequences of the 5 S RNAs ofAzotobacter vinelandii, Pseudomonas aeruginosa andPseudomonas fluorescens with some notes on 5 S RNA secondary structure. Nucleic Acids Res 11:1245–1252
Dams E, Huysmans E, Vandenberghe A, De Wachter R (1986) Structure of clostridial 5 S ribosomal RNAs and bacterial evolution. Syst Appl Microbiol 9:54–61
Dekio S, Yamasaki R, Jidoi J, Hori H, Osawa S (1984) Secondary structure and phylogeny ofStaphylococcus andMicrococcus 5 S rRNAs. J Bacteriol 159:233–237
Delihas N, Andersen J (1982) Generalized structures of the 5 S ribosomal RNAs. Nucleic Acids Res 10:7323–7344
De Wachter R, Chen MW, Vandenberghe A (1982) Conservation of secondary structure in 5 S ribosomal RNA: a uniform model for eukaryotic, eubacterial, archaebacterial and organelle sequences is energetically favourable. Biochimie 64:311–329
De Wachter R, Huysmans E, Vandenberghe A (1985) 5 S ribosomal RNA as a tool for studying evolution. In: Schleifer KH, Stackebrandt E (eds) Evolution of prokaryotes. Academic Press, New York, pp 115–141
Erdmann VA, Wolters J, Huysmans E, De Wachter R (1985) Collection of published 5 S, 5.8 S and 4.5 S ribosomal RNA sequences. Nucleic Acids Res 13:r105-r153
Fang BL, De Baere R, Vandenberghe A, De Wachter R (1982) Sequences of three molluscan 5 S ribosomal RNAs confirm the validity of a dynamic secondary structure model. Nucleic Acids Res 10:4679–4685
Fox GE, Luehrsen KR, Woese CR (1982) Archaebacterial 5 S ribosomal RNA. Zentralbl Bakteriol Mikrobiol Hyg 1 Abt Orig C 3:330–345
Hori H, Osawa S, Murao K, Ishikura H (1980) The nucleotide sequence of 5 S ribosomal RNA fromMicrococcus lysodeikticus. Nucleic Acids Res 8:5423–5426
Jagadeeswaran P, Cherayil JD (1978) Nucleotide sequence of 5 S RNA ofMycobacterium smegmatis. Proc Indian Acad Sci 87B:213–224
Kimura M, Ohta T (1972) On the stochastic model for estimation of mutational distance between homologous proteins. J Mol Evol 2:87–90
Lim BL, Hori H, Osawa S (1983) The nucleotide sequences of 5 S rRNAs from two red algae,Gracilaria compressa andPorphyra tenera. Nucleic Acids Res 11:5185–5188
Nazar RN, Wildeman AG (1981) Altered features in the secondary structure ofVicia faba 5.8 S rRNA. Nucleic Acids Res 9:5345–5358
Nishikawa K, Takemura S (1978) Structure and function of 5 S ribosomal ribonucleic acid fromTorulopsis utilis. IV Detection of exposed guanine residues by chemical modification with kethoxal. J Biochem 84:259–266
Oyaizu H, Woese CR (1985) Phylogenetic relationships among the sulfate respiring bacteria, myxobacteria and purple bacteria. Syst Appl Microbiol 6:257–263
Pace NR, Pato ML, McKibbin J, Radcliffe CW (1973) Precursors of 5 S ribosomal RNA inBacillus subtilis. J Mol Biol 75:619–631
Rogers MJ, Simmons J, Walker RT, Weisburg WG, Woese CR, Tanner RS, Robinson JM, Stahl DA, Olsen G, Leach RH, Maniloff J (1985) Construction of the mycoplasma evolutionary tree from 5 S rRNA sequence data. Proc Natl Acad Sci USA 82:1160–1164
Simoncsits A (1980) 3′ Terminal labelling of RNA with β-32P-pyrophosphate group and its application to the sequence analysis of 5 S RNA fromStreptomyces griseus. Nucleic Acids Res 8:4111–4124
Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman, San Francisco
Stahl DA, Luehrsen KR, Woese CR, Pace NR (1981) An unusual 5 S rRNA fromSulfolobus acidocaldarius, and its implication for a general 5 S rRNA structure. Nucleic Acids Res 9:6129–6137
Takaiwa F, Kusuda M, Saga N, Sugiura M (1982) The nucleotide sequence of 5 S rRNA from a red algaPorphyra yezoensis. Nucleic Acids Res 10:6037–6040
Ursi D, Vandenberghe A, De Wachter R (1982) The sequence of the 5.8 S ribosomal RNA of the crustaceanArtemia salina. With a proposal for a general secondary structure model for 5.8 S ribosomal RNA. Nucleic Acids Res 10:3517–3530
Villanueva E, Luehrsen KR, Gibson J, Delihas N, Fox GE (1985) Phylogenetic origins of the plant mitochondrion based on a comparative analysis of 5 S ribosomal RNA sequences. J Mol Evol 22:46–52
Willekens P, Huysmans E, Vandenberghe A, De Wachter R (1986a) Archaebacterial 5 S ribosomal RNA: nucleotide sequence in two methanogen species, secondary structure models, and molecular evolution. Syst Appl Microbiol 7:151–159
Willekens P, Stetter KO, Vandenberghe A, Huysmans E, De Wachter R (1986b) The structure of 5 S ribosomal RNA in the methanogenic archaebacteriaMethanolobus tindarius andMethanococcus thermolithotrophicus. FEBS Lett 204:273–278
Woese CR, Stackebrandt E, Macke TJ, Fox GE (1985a) A phylogenetic definition of the major eubacterial taxa. Syst Appl Microbiol 6:143–151
Woese CR, Stackebrandt E, Ludwig W (1985b) What are mycoplasmas: the relationship of tempo and mode in bacterial evolution. J Mol Evol 21:305–316
Yamada T (1982) Characterization of an S1-like protein inMycobacterium smegmatis ribosomes. FEBS Lett 142:267–270
Yamada T, Nagata A, Ono Y, Suzuki Y, Yamanouchi T (1985) Alteration of ribosomes and RNA polymerase in drug-resistant clinical isolates ofMycobacterium tuberculosis. Antimicrob Agents Chemother 27:921–924
