Crystal Structure of the Endophilin-A1 BAR Domain
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Brodin, 2000, Sequential steps in clathrin-mediated synaptic vesicle endocytosis, Curr. Opin. Neurobiol., 10, 312, 10.1016/S0959-4388(00)00097-0
Higgins, 2002, Snap-shots of clathrin-mediated endocytosis, Trends Biochem. Sci., 27, 257, 10.1016/S0968-0004(02)02089-3
Murthy, 2003, Cell biology of the presynaptic terminal, Annu. Rev. Neurosci., 26, 701, 10.1146/annurev.neuro.26.041002.131445
Takei, 2001, Clathrin-mediated endocytosis: membrane factors pull the trigger, Trends Cell. Biol., 11, 385, 10.1016/S0962-8924(01)02082-7
Koenig, 1998, Omega images at the active zone may be endocytotic rather than exocytotic: implications for the vesicle hypothesis of transmitter release, Proc. Natl Acad. Sci. USA, 95, 12677, 10.1073/pnas.95.21.12677
Fotin, 2004, Molecular model for a complete clathrin lattice from electron cryomicroscopy, Nature, 432, 573, 10.1038/nature03079
Bonifacino, 2004, The mechanisms of vesicle budding and fusion, Cell, 116, 153, 10.1016/S0092-8674(03)01079-1
Slepnev, 2000, Accessory factors in clathrin-dependent synaptic vesicle endocytosis, Nature Rev. Neurosci., 1, 161, 10.1038/35044540
Ringstad, 1997, The SH3p4/Sh3p8/ SH3p13 protein family: binding partners for synaptojanin and dynamin via a Grb2-like Src homology 3 domain, Proc. Natl Acad. Sci. USA, 94, 8569, 10.1073/pnas.94.16.8569
Gad, 2000, Fission and uncoating of synaptic clathrin-coated vesicles are perturbed by disruption of interactions with the SH3 domain of endophilin, Neuron, 27, 301, 10.1016/S0896-6273(00)00038-6
Hill, 2001, The role of dynamin and its binding partners in coated pit invagination and scission, J. Cell Biol., 152, 309, 10.1083/jcb.152.2.309
Ringstad, 1999, Endophilin/SH3p4 is required for the transition from early to late stages in clathrin-mediated synaptic vesicle endocytosis, Neuron, 24, 143, 10.1016/S0896-6273(00)80828-4
Simpson, 1999, SH3-domain-containing proteins function at distinct steps in clathrin-coated vesicle formation, Nature Cell. Biol., 1, 119, 10.1038/10091
Guichet, 2002, Essential role of endophilin A in synaptic vesicle budding at the Drosophila neuromuscular junction, EMBO J., 21, 1661, 10.1093/emboj/21.7.1661
Verstreken, 2002, Endophilin mutations block clathrin-mediated endocytosis but not neurotransmitter release, Cell, 109, 101, 10.1016/S0092-8674(02)00688-8
Schmidt, 1999, Endophilin I mediates synaptic vesicle formation by transfer of arachidonate to lysophosphatidic acid, Nature, 401, 133, 10.1038/43613
Micheva, 1997, SH3 domain-dependent interactions of endophilin with amphiphysin, FEBS Letters, 414, 308, 10.1016/S0014-5793(97)01016-8
Fabian-Fine, 2003, Endophilin promotes a late step in endocytosis at glial invaginations in drosophila photoreceptor terminals, J. Neurosci., 23, 10732, 10.1523/JNEUROSCI.23-33-10732.2003
Rikhy, 2002, Endophilin is critically required for synapse formation and function in Drosophila melanogaster, J. Neurosci., 22, 7478, 10.1523/JNEUROSCI.22-17-07478.2002
Verstreken, 2003, Synaptojanin is recruited by endophilin to promote synaptic vesicle uncoating, Neuron, 40, 733, 10.1016/S0896-6273(03)00644-5
Schuske, 2003, Endophilin is required for synaptic vesicle endocytosis by localizing synaptojanin, Neuron, 40, 749, 10.1016/S0896-6273(03)00667-6
Simpson, 1999, SH3-domain-containing proteins function at distinct steps in clathrin-coated vesicle formation, Nature Cell. Biol., 1, 119, 10.1038/10091
Hannah, 1999, Synaptic vesicle biogenesis, Annu. Rev. Cell Dev. Biol., 15, 733, 10.1146/annurev.cellbio.15.1.733
Chen, 2003, Formation of an endophilin-Ca2+ channel complex is critical for clathrin-mediated synaptic vesicle endocytosis, Cell, 115, 37, 10.1016/S0092-8674(03)00726-8
Gundelfinger, 2003, Temporal and spatial coordination of exocytosis and endocytosis, Nature Rev. Mol. Cell. Biol., 4, 127, 10.1038/nrm1016
Wang, 2003, Endophilins interact with Moloney murine leukemia virus Gag and modulate virion production, J. Biol., 3, 4, 10.1186/1475-4924-3-4
Karbowski, 2004, Endophilin B1 is required for the maintenance of mitochondrial morphology, J. Cell Biol., 166, 1027, 10.1083/jcb.200407046
Sugiura, 2004, Inhibitory role of endophilin 3 in receptor-mediated endocytosis, J. Biol. Chem., 279, 23343, 10.1074/jbc.M312607200
Petrelli, 2002, The endophilin-CIN85-Cbl complex mediates ligand-dependent downregulation of c-Met, Nature, 416, 187, 10.1038/416187a
Soubeyran, 2002, Cbl-CIN85-endophilin complex mediates ligand-induced downregulation of EGF receptors, Nature, 416, 183, 10.1038/416183a
Stamenova, 2004, The Rsp5 ubiquitin ligase binds to and ubiquitinates members of the yeast CIN85-endophilin complex, Sla1-Rvs167, J. Biol. Chem., 279, 16017, 10.1074/jbc.M313479200
Chatellard-Causse, 2002, Alix (ALG-2-interacting protein X), a protein involved in apoptosis, binds to endophilins and induces cytoplasmic vacuolization, J. Biol. Chem., 277, 29108, 10.1074/jbc.M204019200
Peter, 2004, BAR domains as sensors of membrane curvature: the amphiphysin BAR structure, Science, 303, 495, 10.1126/science.1092586
Habermann, 2004, The BAR-domain family of proteins: a case of bending and binding?, EMBO Rep., 5, 250, 10.1038/sj.embor.7400105
Farsad, 2001, Generation of high curvature membranes mediated by direct endophilin bilayer interactions, J. Cell Biol., 155, 193, 10.1083/jcb.200107075
Takei, 1999, Functional partnership between amphiphysin and dynamin in clathrin-mediated endocytosis, Nature Cell. Biol., 1, 33, 10.1038/9004
Tarricone, 2001, The structural basis of Arfaptin-mediated cross-talk between Rac and Arf signalling pathways, Nature, 411, 215, 10.1038/35075620
Zimmerberg, 2004, Membrane curvature: how BAR domains bend bilayers, Curr. Biol., 14, R250, 10.1016/j.cub.2004.02.060
Swain, 1989, Restrained least-squares refinement of native (calcium) and cadmium- substituted carp parvalbumin using X-ray crystallographic data at 1.6-Å resolution, J. Biol. Chem., 264, 16620, 10.1016/S0021-9258(19)84751-8
Kazmirski, 2002, Loss of a metal-binding site in gelsolin leads to familial amyloidosis-Finnish type, Nature Struct. Biol., 9, 112, 10.1038/nsb745
Leinala, 2003, A second binding site revealed by C-terminal truncation of calpain small subunit, a penta-EF-hand protein, Proteins: Struct. Funct. Genet., 53, 649, 10.1002/prot.10453
Wu, 2004, Kinetic regulation of vesicle endocytosis at synapses, Trends Neurosci., 27, 548, 10.1016/j.tins.2004.07.001
Doublie, 1997, Preparation of selenomethionyl proteins for phase determination, Methods Enzymol., 276, 523, 10.1016/S0076-6879(97)76075-0
Otwinowski, 1997, Processing of X-ray data collected in oscillation mode, Methods Enzymol., 276, 307, 10.1016/S0076-6879(97)76066-X
Terwilliger, 1999, Automated MAD and MIR structure solution, Acta Crystallog. sect. D, 55, 849, 10.1107/S0907444999000839
Terwilliger, 2000, Maximum-likelihood density modification, Acta Crystallog. sect. D, 56, 965, 10.1107/S0907444900005072
1994, The CCP4 suite: programs for protein crystallography, Acta Crystallog. sect. D, 50, 157
Emsley, 2004, Coot: model-building tools for molecular graphics, Acta Crystallog. sect. D, 60, 2126, 10.1107/S0907444904019158
Jones, 1991, Improved methods for building protein models in electron density maps and the location of errors in these models, Acta Crystallog. sect. A, 47, 110, 10.1107/S0108767390010224
Brunger, 1998, Crystallography and NMR system: a new software for macromolecular structure determination, Acta Crystallog. sect. D, 54, 905, 10.1107/S0907444998003254
Kraulis, 1991, MOLSCRIPT: a program to produce detailed and schematic plots of protein structures, J. Appl. Crystallog., 24, 946, 10.1107/S0021889891004399
Merritt, 1997, Raster3D: photorealistic molecular graphics, Methods Enzymol., 277, 505, 10.1016/S0076-6879(97)77028-9
Gouet, 1999, ESPript: multiple sequence alignments in PostScript, Bioinformatics, 15, 305, 10.1093/bioinformatics/15.4.305
Nicholls, 1991, Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons, Proteins: Struct. Funct. Genet., 11, 281, 10.1002/prot.340110407
Thompson, 1997, The CLustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucl. Acids Res., 25, 4876, 10.1093/nar/25.24.4876