Ultrastructure and 18S rDNA Phylogeny of Apoikia lindahlii comb. nov. (Chrysophyceae) and its Epibiontic Protists, Filos agilis gen. et sp. nov. (Bicosoecida) and Nanos amicus gen. et sp. nov. (Bicosoecida)

Andersen, 1987, The Synurophyceae classis nov., a new class of algae, Am J Bot, 74, 337, 10.2307/2443810 Andersen, 1989, Absolute orientation of the flagellar apparatus of Hibberdia magna comb. nov. (Chrysophyeae), Nord J Bot, 8, 653, 10.1111/j.1756-1051.1989.tb01742.x Andersen, 1990, The three-dimensional structure of the flagellar apparatus of Chrysosphaerella brevispina (Chrysophyceae) as viewed by high voltage electron microscopy stereo pairs, Phycologia, 29, 86, 10.2216/i0031-8884-29-1-86.1 Andersen, 2004, Biology and systematics of heterokont and haptophyte algae, Am J Bot, 91, 1508, 10.3732/ajb.91.10.1508 Andersen, 1992, Microtubules of the flagellar apparatus are active during prey capture in the chrysophycean alga Epipyxis pulchra, Protoplasma, 166, 8, 10.1007/BF01320138 Andersen, 1999, Phylogenetic analysis of the SSU RNA from members of Chrysophyceae, Protist, 150, 71, 10.1016/S1434-4610(99)70010-6 Belcher, 1972, The morphology and fine structure of the colorless colonial flagellate Anthophysa vegetans (o. f. Müller) Stein, Br Phycol J, 7, 335, 10.1080/00071617200650351 Berney, 2004, How many novel eukaryotic ‘kingdoms’? Pitfalls and limitations of environmental DNA surveys, BMC Biol, 2, 13, 10.1186/1741-7007-2-13 Boenigk, 2008, The past and present classification problem with nanoflagellates exemplified by the genus Monas, Protist, 159, 319, 10.1016/j.protis.2008.01.001 Boenigk, 2005, High diversity of the ‘Spumella-like’ flagellates: an investigation based on the SSU rRNA gene sequences of isolates from habitats located in six different geographic regions, Environ Microbiol, 7, 685, 10.1111/j.1462-2920.2005.00743.x Cavalier-Smith, 2006, Phylogeny and megasystematics of phagotrophic heterokonts (Kingdom Chromista), J Mol Evol, 62, 388, 10.1007/s00239-004-0353-8 Crum, 1992 Fisher, 1996, Desmid–bacterial associations in Sphagnum-dominated Wisconsin peatlands, J Phycol, 32, 543, 10.1111/j.0022-3646.1996.00543.x Fisher, 1998, Bacterial abundance and activity across sites within two Northern Wisconsin Sphagnum bogs, Microb Ecol, 36, 259, 10.1007/s002489900113 Gibbs, 1979, The route of entry of cytoplasmically synthesized proteins into chloroplasts of algae possessing chloroplast ER, J Cell Sci, 35, 253, 10.1242/jcs.35.1.253 Gorham, 1991, Northern peatlands: role in the carbon cycle and probable responses to climatic warning, Ecol Appl, 1, 182, 10.2307/1941811 Graham, 2004, Seasonal dynamics of phytoplankton and planktonic protozoan communities in a northern temperate humic lake: diversity in a dinoflagellate dominated system, Microb Ecol, 48, 528, 10.1007/s00248-004-0223-3 Hibberd, 1979, The structure and phylgenetic significance of the flagellar transition region in the chlorophyll c-containing algae, BioSystems, 11, 243, 10.1016/0303-2647(79)90025-X Ikävalko, 1994, A revision of the taxonomic position of Syncrypta glomerifera (Chrysophyceae), establishment of a new genus Lepidochrysis and observations on the occurrence of L. glomerifera comb. nov. in brackish water, Nord J Bot, 14, 339, 10.1111/j.1756-1051.1994.tb00617.x Jones, 2000, Mixotrophy in planktonic protists: an overview, Freshwater Biol, 45, 219, 10.1046/j.1365-2427.2000.00672.x Karpov, 1998, Ultrastructure and 18S rRNA gene sequence of a small heterotrophic flagellate Siluania monomastiga gen. et sp. nov. (Bicosoecida), Eur J Protistol, 34, 415, 10.1016/S0932-4739(98)80010-2 Karpov, 2001, Rootlet homology, taxonomy, and phylogeny of bicosoecids based on 18S rRNA gene sequences, Protistology, 2, 34 Kristiansen J, Preisig HR, eds (2001) Encyclopedia of Chrysophyte Genera. Bibliotheca Phycologica, Vol. 110 J. Cramer, Berlin, Stuttgart López-García, 2001, Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton, Nature, 409, 603, 10.1038/35054537 Maddison, 2001 Massana, 2006, Distribution and abundance of uncultured heterotrophic flagellates in the world oceans, Environ Microbiol, 8, 1515, 10.1111/j.1462-2920.2006.01042.x Moestrup, 2000, The Flagellate Cytoskeleton: Introduction of a General Terminology for Microtubular Flagellar Roots in Protists, 69 Moriya, 2000, Ultrastructure and 18S rDNA sequence analysis of Wobblia lunata gen et sp. nov., a new heterotrophic flagellate (stramenopiles, incertae sedis), Protist, 151, 41, 10.1078/1434-4610-00006 Müller OF (1773) Vermium Terrestrium et Fluviatilium, vol. 1(1). Havniae et Lipsiae, Copenhagen. O'Kelly, 1996, The flagellar apparatus of Cafeteria roenbergensis Fenchel & Patterson, 1988 (Bicosoecales=Bicosoecida), Eur J Protistol, 32, 216, 10.1016/S0932-4739(96)80021-6 Posada, 1998, Modeltest: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817 Preisig, 1983, Ultrastructure and taxonomy of Paraphysomonas (Chrysophyceae) and related genera 3, Nord J Bot, 3, 695, 10.1111/j.1756-1051.1983.tb01481.x Preisig, 1984, Virus-like particles and endophytic bacteria in Paraphysomonas and Chromophysomonas (Chrysophyceae), Nord J Bot, 4, 279, 10.1111/j.1756-1051.1984.tb01499.x Preisig, 1991, Diversity of Heterotrophic Heterokonts, 361 Pringsheim, 1946, On iron flagellates, Philos Trans R Soc London Ser B Biol Sci, 232, 311, 10.1098/rstb.1946.0004 Schnepf, 1977, The flagellar root apparatus, the microtubular system and associated organelles in the chrysophycean flagellate, Poterioochromonas malhamensis Peterfi (syn. Poteriochromonas stipitata Scherffel and Ochromonas malhamensis Pringsheim), Protoplasma, 92, 87, 10.1007/BF01280202 Sekiguchi, 2002, Vestigial chloroplasts in heterotrophic stramenopiles Pteridomonas danica and Ciliophrys infusionum (Dictyochophyceae), Protist, 153, 157, 10.1078/1434-4610-00094 Silva, 1960, Remarks on algal nomenclature III, Taxon, 9, 18, 10.2307/1217351 Skuja, 1956, Taxonomische und biologische Studien über das Phytoplankton schwedischer Binnengewässer, Nova Acta Regiae Soc Sci Ups Ser IV, 16, 1 Stamatakis, 2006, RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models, Bioinformatics, 22, 2688, 10.1093/bioinformatics/btl446 Stoeck, 2008, Multigene phylogenies of clonal Spumella-like strains, a cryptic heterotrophic nanoflagellate, isolated from different geographical regions, Int J Syst Evol Microbiol, 58, 716, 10.1099/ijs.0.65310-0 1973 Swofford, 2002 Verhagen, 1994, Adriamonas peritocrescens gen. nov., sp. nov., a new free-living soil flagellate (Protista, Pseudodendromonadidae Incertae Sedis), Eur J Protistol, 30, 295, 10.1016/S0932-4739(11)80076-3 Wetherbee, 1991, Flagella of a chrysophycean alga play an active role in prey capture and selection. Direct observation on Epipyxis pulchra using image enhanced video microscopy, Protoplasma, 166, 1, 10.1007/BF01320137 Wujek, 1984, Bacteria in the perinuclear cisternae of the chrysophyte Chrysosphaerella, Trans Kans Acad Sci, 87, 32, 10.2307/3627761 Yubuki, 2008, A unique life cycle and perennation in a colorless chrysophyte Spumella sp, J Phycol, 44, 164, 10.1111/j.1529-8817.2007.00441.x