Global Brain Dynamics Embed the Motor Command Sequence of Caenorhabditis elegans

Ahrens, 2012, Brain-wide neuronal dynamics during motor adaptation in zebrafish, Nature, 485, 471, 10.1038/nature11057 Ahrens, 2013, Whole-brain functional imaging at cellular resolution using light-sheet microscopy, Nat. Methods, 10, 413, 10.1038/nmeth.2434 Anderson, 2014, Toward a science of computational ethology, Neuron, 84, 18, 10.1016/j.neuron.2014.09.005 Bouchard, 2013, Functional organization of human sensorimotor cortex for speech articulation, Nature, 495, 327, 10.1038/nature11911 Briggman, 2005, Optical imaging of neuronal populations during decision-making, Science, 307, 896, 10.1126/science.1103736 Bruno, 2015, Modular deconstruction reveals the dynamical and physical building blocks of a locomotion motor program, Neuron, 86, 304, 10.1016/j.neuron.2015.03.005 Busch, 2012, Tonic signaling from O2 sensors sets neural circuit activity and behavioral state, Nat. Neurosci., 15, 581, 10.1038/nn.3061 Chalasani, 2007, Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans, Nature, 450, 63, 10.1038/nature06292 Chalfie, 1985, The neural circuit for touch sensitivity in Caenorhabditis elegans, J. Neurosci., 5, 956, 10.1523/JNEUROSCI.05-04-00956.1985 Chartrand, 2011, Numerical differentiation of noisy, nonsmooth data, ISRN Applied Mathematics, 2011, 1, 10.5402/2011/164564 Churchland, 2012, Neural population dynamics during reaching, Nature, 487, 51, 10.1038/nature11129 Cisek, 2010, Neural mechanisms for interacting with a world full of action choices, Annu. Rev. Neurosci., 33, 269, 10.1146/annurev.neuro.051508.135409 Cunningham, 2014, Dimensionality reduction for large-scale neural recordings, Nat. Neurosci., 17, 1500, 10.1038/nn.3776 Dankert, 2009, Automated monitoring and analysis of social behavior in Drosophila, Nat. Methods, 6, 297, 10.1038/nmeth.1310 Donnelly, 2013, Monoaminergic orchestration of motor programs in a complex C. elegans behavior, PLoS Biol., 11, e1001529, 10.1371/journal.pbio.1001529 Faumont, 2011, An image-free opto-mechanical system for creating virtual environments and imaging neuronal activity in freely moving Caenorhabditis elegans, PLoS ONE, 6, e24666, 10.1371/journal.pone.0024666 Georgopoulos, 2015, Coding of movements in the motor cortex, Curr. Opin. Neurobiol., 33, 34, 10.1016/j.conb.2015.01.012 Gordus, 2015, Feedback from network states generates variability in a probabilistic olfactory circuit, Cell, 161, 215, 10.1016/j.cell.2015.02.018 Gray, 2005, A circuit for navigation in Caenorhabditis elegans, Proc. Natl. Acad. Sci. USA, 102, 3184, 10.1073/pnas.0409009101 Grillner, 2006, Biological pattern generation: the cellular and computational logic of networks in motion, Neuron, 52, 751, 10.1016/j.neuron.2006.11.008 Ha, 2010, Functional organization of a neural network for aversive olfactory learning in Caenorhabditis elegans, Neuron, 68, 1173, 10.1016/j.neuron.2010.11.025 Harvey, 2012, Choice-specific sequences in parietal cortex during a virtual-navigation decision task, Nature, 484, 62, 10.1038/nature10918 Hendricks, 2012, Compartmentalized calcium dynamics in a C. elegans interneuron encode head movement, Nature, 487, 99, 10.1038/nature11081 Hobert, 2013, 1 Iino, 2009, Parallel use of two behavioral mechanisms for chemotaxis in Caenorhabditis elegans, J. Neurosci., 29, 5370, 10.1523/JNEUROSCI.3633-08.2009 Jin, 2014, Basal ganglia subcircuits distinctively encode the parsing and concatenation of action sequences, Nat. Neurosci., 17, 423, 10.1038/nn.3632 Jolliffe, 2002 Kawano, 2011, An imbalancing act: gap junctions reduce the backward motor circuit activity to bias C. elegans for forward locomotion, Neuron, 72, 572, 10.1016/j.neuron.2011.09.005 Kimata, 2012, Thermotaxis of C. elegans as a model for temperature perception, neural information processing and neural plasticity, Worm, 1, 31, 10.4161/worm.19504 Laurent, 2015, Decoding a neural circuit controlling global animal state in C. elegans, eLife, 4, 4, 10.7554/eLife.04241 Lemon, 2015, Whole-central nervous system functional imaging in larval Drosophila, Nat. Commun., 6, 7924, 10.1038/ncomms8924 Li, 2014, Encoding of both analog- and digital-like behavioral outputs by one C. elegans interneuron, Cell, 159, 751, 10.1016/j.cell.2014.09.056 Luo, 2014, Dynamic encoding of perception, memory, and movement in a C. elegans chemotaxis circuit, Neuron, 82, 1115, 10.1016/j.neuron.2014.05.010 Mante, 2013, Context-dependent computation by recurrent dynamics in prefrontal cortex, Nature, 503, 1, 10.1038/nature12742 Marder, 2007, Understanding circuit dynamics using the stomatogastric nervous system of lobsters and crabs, Annu. Rev. Physiol., 69, 291, 10.1146/annurev.physiol.69.031905.161516 Panier, 2013, Fast functional imaging of multiple brain regions in intact zebrafish larvae using selective plane illumination microscopy, Front. Neural Circuits, 7, 65, 10.3389/fncir.2013.00065 Pierce-Shimomura, 1999, The fundamental role of pirouettes in Caenorhabditis elegans chemotaxis, J. Neurosci., 19, 9557, 10.1523/JNEUROSCI.19-21-09557.1999 Pokala, 2014, Inducible and titratable silencing of Caenorhabditis elegans neurons in vivo with histamine-gated chloride channels, Proc. Natl. Acad. Sci. USA, 111, 2770, 10.1073/pnas.1400615111 Prevedel, 2014, Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy, Nat. Methods, 11, 727, 10.1038/nmeth.2964 Schrödel, 2013, Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light, Nat. Methods, 10, 1013, 10.1038/nmeth.2637 Seeds, 2014, A suppression hierarchy among competing motor programs drives sequential grooming in Drosophila, eLife, 3, e02951, 10.7554/eLife.02951 Shenoy, 2013, Cortical control of arm movements: a dynamical systems perspective, Annu. Rev. Neurosci., 36, 337, 10.1146/annurev-neuro-062111-150509 Stephens, 2008, Dimensionality and dynamics in the behavior of C. elegans, PLoS Comput. Biol., 4, e1000028, 10.1371/journal.pcbi.1000028 Varshney, 2011, Structural properties of the Caenorhabditis elegans neuronal network, PLoS Comput. Biol., 7, e1001066, 10.1371/journal.pcbi.1001066 Wen, 2012, Proprioceptive coupling within motor neurons drives C. elegans forward locomotion, Neuron, 76, 750, 10.1016/j.neuron.2012.08.039 White, 1986, The structure of the nervous system of the nematode Caenorhabditis elegans, Philos. Trans. R. Soc. Lond. B Biol. Sci., 314, 1, 10.1098/rstb.1986.0056 Zimmer, 2009, Neurons detect increases and decreases in oxygen levels using distinct guanylate cyclases, Neuron, 61, 865, 10.1016/j.neuron.2009.02.013