Altered expression of novel genes in the cerebral cortex following experimental brain injury

Molecular Brain Research - Tập 104 Số 2 - Trang 148-158 - 2002
Nobuhide Kobori1, Guy L. Clifton2, Pramod K. Dash2
1The Vivian L. Smith Center for Neurological Research, Department of Neurobiology and Anatomy, The University of Texas Medical School, PO Box 20708, Houston, TX 77255, USA.
2The Vivian L. Smith Center for Neurological Research, Departments of Neurobiology and Anatomy, Neurosurgery, The University of Texas Medical School, PO Box 20708, Houston, TX 77255, USA

Tóm tắt

Từ khóa


Tài liệu tham khảo

Brown, 2001, Transcript analysis of 1003 novel yeast genes using high-throughput Northern hybridizations, EMBO J., 20, 3177, 10.1093/emboj/20.12.3177

Bustin, 2000, Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays, J. Mol. Endocrinol., 25, 169, 10.1677/jme.0.0250169

Calogero, 1999, The lack of chromosomal protein Hmg1 does not disrupt cell growth but causes lethal hypoglycaemia in newborn mice, Nat. Genet., 22, 276, 10.1038/10338

Cavallaro, 2001, Gene expression profiles during long-term memory consolidation, Eur. J. Neurosci., 13, 1809, 10.1046/j.0953-816x.2001.01543.x

Chomczynski, 1987, Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction, Anal. Biochem., 162, 156, 10.1016/0003-2697(87)90021-2

Chou, 2001, Identity of nuclear high-mobility-group protein, HMG-1, and sulfoglucuronyl carbohydrate-binding protein, SBP-1, in brain, J. Neurochem., 77, 120, 10.1046/j.1471-4159.2001.t01-1-00209.x

Christy, 1991, An Id-related helix-loop-helix protein encoded by a growth factor-inducible gene, Proc. Natl. Acad. Sci. USA, 88, 1815, 10.1073/pnas.88.5.1815

Cook, 1998, Molecular cloning and characterization of TIEG2 reveals a new subfamily of transforming growth factor-beta-inducible Sp1-like zinc finger-encoding genes involved in the regulation of cell growth, J. Biol. Chem., 273, 25929, 10.1074/jbc.273.40.25929

Dash, 1995, Spatial memory deficits, increased phosphorylation of the transcription factor CREB, and induction of the AP-1 complex following experimental brain injury, J. Neurosci., 15, 2030, 10.1523/JNEUROSCI.15-03-02030.1995

Dixon, 1991, A controlled cortical impact model of traumatic brain injury in the rat, J. Neurosci. Methods, 39, 253, 10.1016/0165-0270(91)90104-8

Dixon, 1997, Nerve growth factor attenuates cholinergic deficits following traumatic brain injury in rats, Exp. Neurol., 146, 479, 10.1006/exnr.1997.6557

Dutcher, 1999, Patterns of immediate early gene mRNA expression following rodent and human traumatic brain injury, Neurol. Res., 21, 234, 10.1080/01616412.1999.11740924

Eisen, 1998, Cluster analysis and display of genome-wide expression patterns, Proc. Natl. Acad. Sci. USA, 95, 14863, 10.1073/pnas.95.25.14863

Faden, 1996, Pharmacologic treatment of acute traumatic brain injury, J. Am. Med. Assoc., 276, 569, 10.1001/jama.1996.03540070065034

Fautsch, 1998, TGFbeta-inducible early gene (TIEG) also codes for early growth response alpha (EGRalpha): evidence of multiple transcripts from alternate promoters, Genomics, 51, 408, 10.1006/geno.1998.5388

Haaland, 2000, Neural representations of skilled movement, Brain, 123, 2306, 10.1093/brain/123.11.2306

Hayes, 1995, Changes in gene expression following traumatic brain injury in the rat, J. Neurotrauma, 12, 779, 10.1089/neu.1995.12.779

Hayes, 1995, Cytoskeletal derangements following central nervous system injury: modulation by neurotrophic gene transfection, J. Neurotrauma, 12, 933, 10.1089/neu.1995.12.933

Herbert, 1986, Transthyretin: a choroid plexus-specific transport protein in human brain, Neurology, 36, 900, 10.1212/WNL.36.7.900

Herdegen, 2001, AP-1 proteins in the adult brain: facts and fiction about effectors of neuroprotection and neurodegeneration, Oncogene, 20, 2424, 10.1038/sj.onc.1204387

Hermsdorfer, 2001, Cortical correlates of gesture processing: clues to the cerebral mechanisms underlying apraxia during the imitation of meaningless gestures, Neuroimage, 14, 149, 10.1006/nimg.2001.0796

Hicks, 1999, Mild experimental brain injury differentially alters the expression of neurotrophin and neurotrophin receptor mRNAs in the hippocampus, Exp. Neurol., 160, 469, 10.1006/exnr.1999.7216

Hulsebosch, 1998, Traumatic brain injury in rats results in increased expression of Gap-43 that correlates with behavioral recovery, Neurosci. Lett., 255, 83, 10.1016/S0304-3940(98)00712-5

Ingi, 1998, Dynamic regulation of RGS2 suggests a novel mechanism in G-protein signaling and neuronal plasticity, J. Neurosci., 18, 7178, 10.1523/JNEUROSCI.18-18-07178.1998

Jellinger, 2001, Traumatic brain injury as a risk factor for Alzheimer disease. Comparison of two retrospective autopsy cohorts with evaluation of ApoE genotype, BMC Neurology, 1, 3, 10.1186/1471-2377-1-3

Katano, 1998, Differential induction of immediate early gene mRNAs following cryogenic and impact trauma with/without craniotomy in rats, Brain Res., 800, 69, 10.1016/S0006-8993(98)00493-4

Klein, 2000, Assignment of the mouse Rbpsuh gene to chromosome 5 and one processed pseudogene Rbpsuh-rs3 to chromosome 6, Cytogenet. Cell Genet., 88, 218, 10.1159/000015554

Lockhart, 2000, Genomics, gene expression and DNA arrays, Nature, 405, 827, 10.1038/35015701

Luo, 2001, Microarray applications in neuroscience, Neurobiol. Dis., 8, 183, 10.1006/nbdi.2001.0387

Lye, 2000, Traumatic brain injury as a risk factor for Alzheimer’s disease: a review, Neuropsychol. Rev., 10, 115, 10.1023/A:1009068804787

Lyeth, 1990, Prolonged memory impairment in the absence of hippocampal cell death following traumatic brain injury in the rat, Brain Res., 526, 249, 10.1016/0006-8993(90)91229-A

McIntosh, 1998, Novel pharmacologic strategies in the treatment of experimental traumatic brain injury: 1998, J. Neurotrauma, 15, 731, 10.1089/neu.1998.15.731

Meaney, 1994, Modification of the cortical impact model to produce axonal injury in the rat cerebral cortex, J. Neurotrauma, 11, 599, 10.1089/neu.1994.11.599

Merched, 1998, Apolipoprotein E, transthyretin and actin in the CSF of Alzheimer’s patients: relation with the senile plaques and cytoskeleton biochemistry, FEBS Lett., 425, 225, 10.1016/S0014-5793(98)00234-8

Mills, 2001, A new approach for filtering noise from high-density oligonucleotide microarray datasets, Nucleic Acids Res., 29, E72, 10.1093/nar/29.15.e72

Mirnics, 2001, Analysis of complex brain disorders with gene expression microarrays: schizophrenia as a disease of the synapse, Trends Neurosci., 24, 479, 10.1016/S0166-2236(00)01862-2

Moore, 1999, Sphingosine-1-phosphate induces apoptosis of cultured hippocampal neurons that requires protein phosphatases and activator protein-1 complexes, Neuroscience, 94, 405, 10.1016/S0306-4522(99)00288-2

Nag, 1996, Cold-injury of the cerebral cortex: immunolocalization of cellular proteins and blood–brain barrier permeability studies, J. Neuropathol. Exp. Neurol., 55, 880, 10.1097/00005072-199608000-00003

Nagata, 1994, Activation of helix-loop-helix proteins Id1, Id2 and Id3 during neural differentiation, Biochem. Biophys. Res. Commun., 199, 1355, 10.1006/bbrc.1994.1380

Oyesiku, 1999, Regional changes in the expression of neurotrophic factors and their receptors following acute traumatic brain injury in the adult rat brain, Brain Res., 833, 161, 10.1016/S0006-8993(99)01501-2

Phillips, 1992, Expression of c-fos in the hippocampus following mild and moderate fluid percussion brain injury, J. Neurotrauma, 9, 323, 10.1089/neu.1992.9.323

Povlishock, 1995, Are the pathobiological changes evoked by traumatic brain injury immediate and irreversible?, Brain Pathol., 5, 415, 10.1111/j.1750-3639.1995.tb00620.x

Raghupathi, 1996, Regionally and temporally distinct patterns of induction of c-fos, c-jun and junB mRNAs following experimental brain injury in the rat, Brain Res. Mol. Brain Res., 37, 134, 10.1016/0169-328X(95)00289-5

Schlingensiepen, 1994, The role of Jun transcription factor expression and phosphorylation in neuronal differentiation, neuronal cell death, and plastic adaptations in vivo, Cell Mol. Neurobiol., 14, 487, 10.1007/BF02088833

Schwarzman, 1996, Interaction of transthyretin with amyloid beta-protein: binding and inhibition of amyloid formation, Ciba Found. Symp., 199, 146

Smith, 1999, Accumulation of amyloid beta and tau and the formation of neurofilament inclusions following diffuse brain injury in the pig, J. Neuropathol. Exp. Neurol., 58, 982, 10.1097/00005072-199909000-00008

Truettner, 1999, Expression of brain-derived neurotrophic factor, nerve growth factor, and heat shock protein HSP70 following fluid percussion brain injury in rats, J. Neurotrauma, 16, 471, 10.1089/neu.1999.16.471

Tsuzuki, 2000, Transthyretin binds amyloid beta peptides, Abeta1-42 and Abeta1-40 to form complex in the autopsied human kidney—possible role of transthyretin for abeta sequestration, Neurosci. Lett., 281, 171, 10.1016/S0304-3940(00)00834-X

Whalen, 1999, Reduction of cognitive and motor deficits after traumatic brain injury in mice deficient in poly(ADP-ribose) polymerase, J. Cereb. Blood Flow Metab., 19, 835, 10.1097/00004647-199908000-00002

Wittwer, 1997, The LightCycler: a microvolume multisample fluorometer with rapid temperature control, Biotechniques, 22, 176, 10.2144/97221pf02

Wolffe, 1999, Architectural regulations and Hmg1, Nat. Genet., 22, 215, 10.1038/10267

Yamazaki, 2001, A case of dressing apraxia: contributory factor to dressing apraxia, J. Neurol., 248, 235, 10.1007/s004150170234

Yang, 1994, Increased expression of c-fos mRNA and AP-1 transcription factors after cortical impact injury in rats, Brain Res., 664, 141, 10.1016/0006-8993(94)91964-X

Yang, 1996, Increased expression of brain-derived neurotrophic factor but not neurotrophin-3 mRNA in rat brain after cortical impact injury, J. Neurosci. Res., 44, 157, 10.1002/(SICI)1097-4547(19960415)44:2<157::AID-JNR8>3.0.CO;2-C

Yue, 2001, An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression, Nucleic Acids Res., 29, E41, 10.1093/nar/29.8.e41