Biotechnological advances in bioremediation of heavy metals contaminated ecosystems: an overview with special reference to phytoremediation

Dinesh Mani1, Chitranjan Kumar2
1Department of Chemistry, Sheila Dhar Institute of Soil Science, University of Allahabad, Allahabad, India
2Department of Chemistry, Sheila Dhar Institute of Soil Science, University of Allahabad, Allahabad, 211002, UP, India

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Abdel-Ghani NT, Hefny M, El-Chaghaby GAF (2007) Removal of lead from aqueous solution using low cost abundantly available adsorbents. Int J Environ Sci Tech 4(1):67–73

Achal V, Pan X, Zhang D (2011) Remediation of copper-contaminated soil by Kocuria flava CR1, based on microbially induced calcite precipitation. Ecol Eng 37:1601–1605

Achal V, Pan X, Fu Q, Zhang D (2012a) Biomineralization based remediation of As (III) contaminated soil by Sporosarcina ginsengisoli. J Hazar Mater 201–202:178–184

Achal V, Pan X, Zhang D (2012b) Bioremediation of strontium (Sr) contaminated aquifer quartz sand based on carbonate precipitation induced by Sr resistant Halomonas sp. Chemosphere 89:764–768

Acheampong MA, Meulepas RJW, Lens PNL (2010) Removal of heavy metals and cyanide from gold mine wastewater. J Chem Technol Biotechnol 85(5):590–613

Adams JA, Reddy KR (2003) Extent of benzene biodegradation in saturated soil column during air sparging. Ground Water Monitor Remediat 23(3):85–94

Ahluwalia SS, Goyal D (2007) Microbial and plant derived biomass for removal of heavy metals from wastewater. Bioresour Technol 98(12):2243–2257

Alves RRN, Souto WMS (2011) Ethnozoology in Brazil: current status and perspectives. J Ethnobiol Ethnomed 7:1–22

Artursson V, Finlay RD, Jansson JK (2006) Interactions between arbuscular mycorrhizal fungi and bacteria and their potential for stimulating plant growth. Environ Microbiol 8:1–10

Atagana HI, Haynes RJ, Wallis FM (2003) Optimization of soil physical and chemical conditions for the bioremediation of creosote-contaminated soil. Biodegradation 14:297–307

Audet P (2013) Examining the ecological paradox of the mycorrhizal-metal-hyperaccumulators. Arch Agron Soil Sci 59(4):549–558

Azouaou N, Sadaoui Z, Mokaddem H (2008) Removal of Cadmium from aqueous solution by adsorption on vegetable wastes. J Appl Sci 8(24):4638–4643

Baldwin BR, Peacock AD, Park M, Ogles DM et al (2008) Multilevel samplers as microcosms to assess microbial response to biostimulation. Ground Water 46:295–304

Banuelos G, Terry N, Leduc DL, Pilon-Smits EAH, Mackey B (2005) Field trial of transgenic Indian mustard plants shows enhanced phytoremediation of selenium-contaminated sediment. Environ Sci Technol 39:1771–1777

Batayneh AT (2012) Toxic (aluminum, beryllium, boron, chromium and zinc) in groundwater: health risk assessment. Int J Environ Sci Technol 9:153–162

Bennedsen LR, Anne Krischker, Jørgensen TH, Søgaard EG (2012) Mobilization of metals during treatment of contaminated soils by modified Fenton’s reagent using different chelating agents. J Hazard Mater 199–200:128–134

Bruins MR, Kapil S, Oehme FW (2000) Microbial resistance to metals in the environment. Ecotoxicol Environ Saf 45(3):198–207

Brunetti P, Zanella L, Proia A, Paolis AD, Falasca G, Altamura MM, Toppi LSD, Costantino P, Cardarelli M (2011) Cadmium tolerance and phytochelatin content of Arabidopsis seedlings over-expressing the phytochelatin synthase gene AtPCS1. J Exp Bot 62(15):5509–5519

Brunk E, Ashari N, Athri P, Campomanes P, Carvalho DFF et al (2011) Pursuing the frontiers of the first-principles based computer simulations of chemical and biological systems. Chimia 65(9):667–671

Brunner I, Luster J, Gunthardt GMS, Frey B (2008) Heavy metal accumulation and phytostabilization potential of tree fine roots in a contaminated soil. Environ Pollut 152:559–568

Cardenas E, Wu WM, Leigh MB, Carley J, Carroll S, Gentry T, Luo J, Watson D, Gu B, Ginder-Vogel M et al (2008) Microbial communities in contaminated sediments, associated with bioremediation of uranium to submicromolar levels. Appl Environ Microbiol 74:3718–3729

Chakraborty R, Wu CH, Hazen TC (2012) Systems biology approach to bioremediation. Curr Opin Biotechnol 23:1–8

Chaney RL, Angle JS, Broadhurst CL, Peters CA, Tappero RV, Sparks DL (2007) Improved understanding of hyperaccumulation yields commercial phytoextraction and phytomining echnologies. J Environ Qual 36:1429–1443

Chatterjee S, Singh L, Chattopadhyay B, Datta S, Mukhopadhyay SK (2012) A study on the waste metal remediation using floriculture at East Calcutta Wetlands, a Ramsar site in India. Environ Monit Assess 184:5139–5150

Chauhan A, Jain RK (2010) Biodegradation: gaining insight through proteomics. Biodegradation 21:861–879

Checa SK, Zurbriggen MD, Soncini FC (2012) Bacterial signaling systems as platforms for rational design of new generations of biosensors. Curr Opin Biotechnol 23:766–772

Chen SY, Lin PL (2010) Optimization of operating parameters for the metal bioleaching process of contaminated soil. Separ Purif Technol 71(2):178–185

Chen SY, Lin LG, Lee CY (2003) Effects of ferric ion on bioleaching of heavy metals from contaminated sediment. Water Sci Technol 48(8):151–158

Chen Z, Li Z, Lin Y, Yin M, Ren J, Qu X (2013) Biomineralization inspired surface engineering of nanocarriers for pH-responsive, targeted drug delivery. Biomaterials 34:1364–1371

Cheng SS, Hsieh TL, Pan PT, Gaop CH, Chang LH, Whang LM, Chang TC (2009) Study on biomonitoring of aged TPH-contaminated soil with bioaugmentation and biostimulation (Conference paper). 10th International in situ and on-site bioremediation symposium, Baltimore MD, May 5–8, 2009

Chikere CB, Chikere BO, Okpokwasili GC (2012) Bioreactor-based bioremediation of hydrocarbon-polluted Niger Delta marine sediment, Nigeria. Biotechnology 2:53–66

Choudhary S, Sar P (2011) Uranium biomineralization by a metal resistant Pseudomonas aeruginosa strain isolated from contaminated mine waste. J Hazar Mater 186:336–343

Christopher C (2000) Phytochelatins and their roles in heavy metal detoxification. Plant Physiol 123:828–832

Clemens S, Palmgren MG, Kramer U (2002) A long way ahead: understanding and engineering plant metal accumulation. Trends Plant Sci 7:309–315

Conesa HM, Evangelou MWH, Robinson BH, Schulin R (2012) A critical view of current state of phytotechnologies to remediate soils: still a promising tool? Sci World J. doi: 10.1100/2012/173829

Cooley A, Rexroad R, Morrisette J, Cobb JA, Blackert D (2009) Biosparging and monitored natural attenuation of hydrocarbon, chlorinated solvent, and arsenic-impacted groundwater. 10th international in situ and on-situ bioremediation symposium. Baltimore MD, May 5–8, 2009

Danh LT, Truong P, Mammucari R, Tran T, Foster N (2009) Vetiver grass, Vetiveria zizanioides: a choice plant for phytoremediation of heavy metals and organic wastes. Int J Phytoremediat 11:664–691

Dary M, Chamber-Pérez MA, Palomares AJ, Pajuelo E (2010) “In situ” phytostabilisation of heavy metal polluted soils using Lupinus luteus inoculated with metal resistant plant-growth promoting rhizobacteria. J Hazard Mater 177(1–3):323–330

de la Fuente C, Clemente R, Martínez-Alcalá I, Tortosa G, Bernal MP (2011) Impact of fresh and composted solid olive husk and their water-soluble fractions on soil heavy metal fractionation; microbial biomass and plant uptake. J Hazard Mater 186(2–3):1283–1289

Deng L, Su Y, Su H, Wang X, Zhu X (2007) Sorption and desorption of lead (II) from wastewater by green algae Cladophora fascicularis. J Hazard Mater 143(1–2):220–225

Dhankher OP, Doty SL, Meagher RB, Pilon-Smits E (2011) Biotechnological approaches for phytoremediation. In: Altman A, Hasegawa PM (eds) Plant biotechnology and agriculture. Academic Press, Oxford, pp 309–328

Dominguez MT, Maranon T, Murillo JM, Schulin R, Robinson BH (2008) Trace element accumulation in woody plants of the Guadiamar Valley, SW Spain: a large-scale phytomanagement case study. Environ Pollut 152(1):50–59

Dong G, Wang Y, Gong L, Wang M, Wang H, He N, Zheng Y, Li Q (2013) Formation of soluble Cr(III) end-products and nanoparticles during Cr(VI) reduction by Bacillus cereus strain XMCr-6. Biochem Eng J 70:166–172

Doran PM (2009) Application of plant tissue cultures in phytoremediation research: incentives and limitations. Biotechnol Bioeng 103:60–76

Dowarah J, Boruah HPD, Gogoi J, Pathak N, Saikia N, Handique AK (2009) Eco-restoration of a high-sulphur coal mine overburden dumping site in northeast India: a case study. J Earth Syst Sci 118(5):597–608

Drewniak L, Sklodowska A (2013) Arsenic transforming microbes and their role in biomining processes. Environ Sci Pollut Res (in press PMID: 23299972)

Dua M, Sethunathan N, Johri AK (2002) Biotechnology bioremediation success and limitations. App Microbiol Biotechnol 59(2–3):143–152

Dubey A, Shiwani S (2012) Adsorption of lead using a new green material obtained from Portulaca plant. Int J Environ Sci Technol 9:15–20

Dubey SK, Dubey J, Mehra S, Tiwari P, Bishwas AJ (2011) Potential use of cyanobacterial species in bioremediation of industrial effluents. Afr J Biotechnol 10(7):1125–1132

Dudhane M, Borde M, Jite PK (2012) Effect of aluminium toxicity on growth responses and antioxidant activities in Gmelina arborea Roxb inoculated with AM Fungi. Int J Phytoremediat 14(7):643–655

Duong TTT, Verma SL, Penfold C, Marschner P (2013) Nutrient release from composts into the surrounding soil. Geoderma 195–196:42–47

Ekmekyapar F, Aslan A, Bayhan YK, Cakici A (2012) Biosorption of Pb(II) by Nonliving Lichen Biomass of Cladonia rangiformis Hoffm. Int J Environ Res 6(2):417–424

Ernst WHO (2006) Evolution of metal tolerance in higher plants. For Snow Landsc Res 80:251–274

Fiset JF, Blais JF, Riverso PA (2008) Review on the removal of metal ions from effluents using seaweeds, alginate derivatives and other sorbents. Rev Sci Eau 21(3):283–308

Fulekar MH, Sharma J, Tendulkar A (2012) Bioremediation of heavy metals using biostimulation in laboratory bioreactor. Environ Monit Assess 184(12):7299–7307

Gaur A, Adholeya A (2004) Prospects of arbuscular mycorrhizal fungi in phytoremediation of heavy metal contaminated soils. Curr Sci 86:528–534

Geneve JD, Fernandez M (2008) New avenues for microbial biotechnology: the beginning of a golden era. Microbiol Biotechnol 1(2):104–106

Gisbert C, Ros R, Haro AD, Walker DJ, Bernal MP, Serrano R, Navarro-Avino J (2003) A plant genetically modified that accumulates Pb is especially promising for phytoremediation. Biochem Biophys Res Commun 303:440–445

Gonzalez OJ, Rozas MA, Alkorta I, Garbisu C (2008) Dendroremediation of heavy metal polluted soils. Rev Environ Health 23:223–234

Govarthanan M, Lee KJ, Cho M, Kim JS, Kamala-Kannan S, Oh BT (2013) Significance of autochthonous Bacillus sp. KK1 on biomineralization of lead in mine tailings. Chemosphere 8:2267–2272

Guo H, Luo S, Chen L, Xiao X, Xi Q, Wei W, Zeng G, Liu C, Wan Y, Chen J, He Y (2010) Bioremediation of heavy metals by growing hyperaccumulator endophytic bacterium Bacillus sp. L14. Bioresour Technol 101(22):8599–8605

Guo B, Liang Y, Qinglin F, Ding N, Liu C, Lin Y, Li H, Li N (2012a) Cadmium stabilization with nursery stocks through transplantation: a new approach of phytoremediation. J Hazard Mater 199–200:233–239

Guo J, Xu W, Ma M (2012b) The assembly of metals chelation by thiols and vacuolar compartmentalization conferred increased tolerance to and accumulation of cadmium and arsenic in transgenic Arabidopsis thaliana. J Hazard Mater 199–200:309–313

Gupta R, Mahapatra H (2003) Microbial biomass: an economical alternative for removal of heavy metals from wastewater. Indian J Exp Biol 41:945–966

Hassan MM (2005) Arsenic poisoning in Bangladesh: spatial mitigation planning with GIS and public participation. Health Policy 74:247–260

Häyrynen P, Landaburu JA, Pongrácz E, Keiski RL (2012) Study of permeate flux in micellar-enhanced ultrafiltration on a semi-pilot scale: simultaneous removal of heavy metals from phosphorous rich real wastewaters. Separ Purif Technol 93(1):59–66

Hazen TC (2010) In situ: groundwater bioremediation. In: Timmis KN (ed) Handbook of hydrocarbon and lipid microbiology. Springer, Berlin, pp 2583–2594

Helalia AM, El-Amir S, Abou-Zeid ST, Zagholoul KF (1990) Bioremediation of saline-sodic soil by amshot grass in northern Egypt. Soil Till Res 22:109–116

Hemme CL, Deng Y, Gentry TJ, Fields MW, Wu L, Barua S, Barry K et al (2010) Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community. ISME J 4:660–672

Hrynkiewicz K, Dabrowska G, Baum C, Niedojadlo K, Leinweber P (2012) Interactive and single effects of ectomycorrhiza formation and Bacillus cereus on metallothionein MT1 expression and phytoextraction of Cd and Zn by Willows. Water Air Soil Pollut 223:957–968

Iori V, Pietrini F, Cheremisina A, Shevyakova NI, Radyukina N, Kuzntsov VV, Zacchini M (2013) Growth responses, metal accumulation and phytoremoval capability in Amaranthus plants exposed to nickel under hydroponics. Water Air Soil Pollut 224(2):1–10

Ismail BS, Farihah K, Khairiah J (2005) Bioaccumulation of heavy metals in vegetables from selected agricultural areas. Bull Environ Contam Toxicol 74:320–327

ITRC (2009) (Interstate Technology & Regulatory Council) Phytotechnology technical and regulatory guidance and decision trees, Revised. PHYTO-3. Washington DC

Jadia CD, Fulekar MH (2008) Vermicomposting of vegetable waste: A biophysicochemical process based on hydro-operating bioreactor. African J Biotechnol 7(20):3723–3730

Jeffries TC, Seymour JR, Newton K, Smith RJ, Seuront L, Mitchell JG (2012) Increases in the abundance of microbial genes encoding halotolerance and photosynthesis along a sediment salinity gradient. Biogeosciences 9(2):815–825

Jiang CY, Sheng XF, Qian M, Wang QY (2008) Isolation and characterization of heavy metal resistant Burkholderia species from heavy metal contaminated paddy field soil and its potential in promoting plant growth and heavy metal accumulation in metal polluted soil. Chemosphere 72:157–164

Jiang J, Xu RK, Jiang TY, Li Z (2012a) Immobilization of Cu(II), Pb(II) and Cd(II) by the addition of rice straw derived biochar to a simulated polluted Ultisol. J Hazard Mater 229:145–150

Jiang X, Wang W, Wang S, Zhang B, Hu J (2012b) Initial identification of heavy metals contamination in Taihu Lake, a eutrophic lake in China. J Environ Sci 24(9):1539–1548

Juwarkar AA, Singh SK (2010) Microbe-assisted phytoremediation approach for ecological restoration of zinc mine spoil dump. Int J Environ Pollut 43(1/2/3): 236–250

Juwarkar AA, Yadav SK, Thawale PR, Kumar P, Singh SK, Chakrabarti T (2009) Developmental strategies for sustainable ecosystem on mine spoil dumps: a case of study. Environ Monit Assess 157:471–481

Kanmani P, Aravind J, Preston D (2012) Remediation of chromium contaminants using bacteria. Int J Environ Sci Technol 9:183–193

Karigar CS, Rao SS (2011) Role of microbial enzymes in the bioremediation of pollutants: a review. Enzyme Res. doi: 10.4061/2011/805187

Kastenhofer K (2007) Converging epistemic cultures? Innovation 20(4):359–373

Kawalec M, Dove AP, Mespouille L, Dubois P (2013) Morpholine- functionalized polycarbonate hydrogels for heavy metal ion sequestration. Polymer Chem 4(4):1260–1270

Kensa MV (2011) Bioremediation: an overview. J Ind Pollut Control 27(2):161–168

Kim S, Park CB (2013) Bio-inspired synthesis of minerals for energy, environment and medicinal applications. Adv Funct Mater 23:10–25

Kim TW, Slowing II, Chung PW, Lin VSY (2010) Ordered mesoporous polymer-silica hybrid nanoparticles as vehicles for the intracellular controlled release of macromolecules. ACS Nano 5:360–365

Kiyono M, Oka Y, Sone Y, Tanaka M, Nakamura R, Sato MH, Pan-Hou H, Sakabe K, Inoue K (2012) Expression of bacterial heavy metal transporter MerC fused with a plant SNARE, SYP121 in Arabidopsis thaliana increases cadmium accumulation and tolerance. Planta 235:841–850

Klassen SP, Malean JE, Grossl PR, Sims RC (2000) Heavy metals in the environment. J Environ Qual 29:1826–1834

Komives T, Gullner G (2006) Dendroremediation: the use of trees in cleaning up polluted soils. Phytoremediat Rhizoremediat pp 23–31

Kramer U (2010) Metal hyperaccumulation in plants. Annu Rev Plant Biol 61:517–534

Kuffner M, Puschenreiter M, Wieshammer G, Gorfer M, Sessitsch A (2008) Rhizosphere bacteria affect growth and metal uptake of heavy metal accumulating willows. Plant Soil 304:35–44

Kuiper I, Lagendijk EL, Bloemberg GV, Lugtenberg BJJ (2004) Rhizoremediation: a beneficial plant-microbe interaction. Mol Plant Microb Interact 17:6–15

Kumar C, Mani D (2010) Enrichment and management of heavy metals in sewage irrigated soil. LAP LAMBERT Academic Publishing AG & Co. KG, Saarbrücken

Kumar C, Mani D (2012) Advances in bioremediation of heavy metals: a tool for environmental restoration. LAP LAMBERT Academic Publishing AG & Co. KG, Saarbrücken

Kumar JIN, Soni H, Kumar RN, Bhatt I (2008a) Macrophytes in Phytoremediation of heavy metal contaminated water and sediments in Pariyej community reserve, Gujarat, India. Turk J Aquat Fish Sci 8:193–200

Kumar R, Joshi SR, Acharya C (2008b) Metal tolerant Bacillus and Pseudomonas from uranium rich soils of Meghalaya. Res J Biotechnol (Special Issue) pp 345–350

Kumar A, Bisht BS, Joshi VD, Dhewa T (2011a) Review on bioremediation of polluted environment: a management tool. Int J Environ Sci 1(6):1079–1093

Kumar R, Acharya C, Joshi SR (2011b) Isolation and analyses of uranium tolerant Serratia marcescens strains and their utilization for aerobic uranium U(VI) bioadsorption. J Microbiol 49(4):568–574

Kumar D, Shivay YS, Dhar S, Kumar C, Prasad R (2013) Rhizospheric flora and the influence of agronomic practices on them: a review. Proc Nat Acad Sci India Sec B Biol Sci 83(1):1–14

Kumari B, Singh SN (2011) Phytoremediation of metals from fly ash through bacterial augmentation. Ecotoxicology 20:166–176

Landaburu-Aguirre J, Pongrácz E, Sarpola A, Keiski RL (2012) Simultaneous removal of heavy metals from phosphorous rich real wastewaters by micellar-enhanced ultrafiltration. Separ Purif Technol 88:130–137

Lee YC, Chang SP (2011) The biosorption of heavy metals from aqueous solution by Spirogyra and Cladophora filamentous macroalgae. Bioresource Technol 102 (9):5297–5304

Lee CS, Li XD, Shi WZ, Cheung SC, Thornton I (2006) Metal contamination in urban, suburban and country park soils of Hong Kong: a study based on GIS and multivariate statistics. Sci Total Environ 356:45–61

Lesmana SO, Febriana N, Soetaredjo FE, Sunarso J, Ismadji S (2009) Studies on potential applications of biomass for the separation of heavy metals from water and wastewater. Biochem Engg J 44(1):19–41

Leung M (2004) Bioremediation: techniques for cleaning up a mess. J Biotechnol 2:18–22

Li L, Cunningham CJ, Pas V, Philp JC, Barry DA, Anderson P (2004) Field trial of a new aeration system for enhancing biodegradation. Waste Manag 24:127–137

Li M, Cheng X, Guo H (2013) Heavy metal removal by biomineralization of urease producing bacteria isolated from soil. Int Biodeterior Biodegr 76:81–85

Lin QUR, Sen LD, Qian DUR, Yao JM (2002) Phytoremediation for heavy metal pollution in water II. The blastofiltration of Pb from water. J Agro Environ Sci. http://en.cnki.com.cn/Article_en/CJFDTOTAL-NHBH200206005.htm

Liu D, Zou J, Wang M, Jiang W (2008) Hexavalent chromium uptake and its effects on mineral uptake, antioxidant defence system and photosynthesis in Amaranthus viridis L. Bioresour Technol 99(7):2628–2636

Loukidou MX, Matis KA, Zouboulis AI, Liakopoulou-Kyriakidou M (2003) Removal of As(V) from wastewaters by chemically modified fungal biomass. Water Res 37(18):4544–4552

Lyyra S, Meagher RB, Kim T, Heaton A et al (2007) Coupling two mercury resistance genes in Eastern cottonwood enhances the processing of organomercury. Plant Biotechnol J 5:254–262

Ma LQ, Komar KM, Tu C, Zhang W, Cai Y, Kennelley ED (2001) A fern that hyperaccumulates arsenic. Nature 409:579

Ma X, Nonvak PJ, Ferguson J, Sadowsky M et al (2007) The impact of H2 addition or dechlorinating microbial communities. Bioremed J 11:45–55

Ma JF, Yamaji N, Mitani N, Xu XY et al (2008) Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci USA 105:9931–9935

Machackova J, Wittlingerova Z, Vlk K, Zima J (2012) Major factors affecting in situ biodegradation rates of jet-fuel during large-scale biosparging project in sedimentary bedrock. J Environ Sci Heal A 47(8):1152–1165

Machado MD, Soares EV, Soares HMVM (2010) Removal of heavy metals using a brewer’s yeast strain of Saccharomyces cerevisiae: chemical speciation as a tool in the prediction and improving of treatment efficiency of real electroplating effluents. J Hazard Mater 180(1–3):347–353

Malaviya P, Singh A (2011) Physiochemical technologies for remediation of chromium-containing waters and wastewaters. Crit Rev Environ Sci Technol 41(12):1111–1172

Mane PC, Bhosle AB (2012) Bioremoval of some metals by living Algae Spirogyra sp. and Spirullina sp. from aqueous solution. Int J Environ Res 6(2):571–576

Mangunwardoyo W, Sudjarwo T, Patria MP (2013) Bioremediation of effluent wastewater treatment plant Bojongsoang Bandung Indonesia using consortium aquatic plants and animals. Int J Res Rev Appl Sci 14(1):150–160

Mani D, Sharma B, Kumar C (2007) Phytoaccumulation, interaction, toxicity and remediation of cadmium from Helianthus annuus L. Bull Envion Contam Toxicol 79(1):71–79

Mani D, Sharma B, Kumar C, Balak S (2012a) Depth-wise distribution, mobility and naturally occurring glutathione based phytoaccumulation of cadmium and zinc in sewage-irrigated soil profile. Int J Environ Sci Technol. doi: 10.1007/s13762-012-0121-z

Mani D, Sharma B, Kumar C, Pathak N, Balak S (2012b) Phytoremediation potential of Helianthus annuus L. in sewage-irrigated Indo-Gangetic alluvial soils. Int J Phytoremediation 14:235–246

Mani D, Sharma B, Kumar C, Balak S (2012c) Cadmium and lead bioaccumulation during growth stages alters sugar and vitamin C content in dietary vegetables. Proc Natl Acad Sci India Sect B Biol Sci 82(4):477–488

Mann S (2001) Biomineralization: principles and concepts in bioinorganic materials chemistry. Oxford University Press, Oxford

Mapanda F, Mangwayana EN, Nyanangara J, Giller KE (2005) The effect of long-term irrigation using wastewater on the heavy metal contents of soils under vegetables in Harare, Zimbabwe. Agr Ecosyst Environ 107:151–165

Marques APGC, Rangel AOSS, Castro PML (2009) Remediation of heavy metal contaminated soils: phytoremediation as a potentially promising clean-up technology. Crit Rev Environ Sci Technol 39(8):622–654

Mclean RI, Abbe GR (2008) Characteristics of Crassostrea ariakensis (Fujita 1913) and Crassostrea virginica (Gmelin 1791) in the discharge area of a nuclear power plant in central Chesapeake Bay. J Shellfish Res 27(3):517–523

Meharg AA, Williams PN, Adomako E, Lawgali YY, Deacon D, Villada A (2009) Geographical variation in total and inorganic as content of polished (white) rice. Environ Sci Technol 43:1612–1617

Memon AR, Schroder P (2009) Implications of metal accumulation mechanisms to phytoremediation. Environ Sci Pollut Res 16:162–175

Mench M, Schwitzgnibel JP, Schroeder P, Bert V, Gawronski S, Gupta S (2009) Assessment of successful experiments and limitations of phytotechnologies: contaminant uptake, detoxification and sequestration, and consequences for food safety. Environ Sci Pollut Res 16:876–900

MoEF (2011) A state-of-the-art report on bioremediation, its applications to contaminated sites in India. Ministry of Environment & Forests, Paryavaran Bhawan, New Delhi Web http://moef.nic.in/downloads/public-information/BioremediationBook.pdf . Accessed 26 March 2012

Mohanty M, Pattnaik MM, Mishra AK, Patra HK (2012) Bio-concentration of chromium- an in situ phytoremediation study at South Kaliapani chromite mining area of Orissa, India. Environ Monit Assess 184:1015–1024

Mukherjee AB, Zevenhoven R, Bhattacharya P, Sajwan KS, Kikuch R (2008) Mercury flow via coal and coal utilization by-products: a global perspective. Resour Conserv Recy 52(4):571–591

Mukhopadhyay S, Maiti SK (2010) Phytoremediation of metal mine waste. Appl Ecol Environ Res 8:207–222

Najafi M, Yousefi Y, Rafati AA (2012) Synthesis, characterization and adsorption studies of several heavy metal ions on amino-functionalized silica nano hollow sphere and silica gel. Separ Purif Technol 85(2):193–205

Nakbanpote W, Paitlertumpai N, Sukadeetad K, Meesungeon O, Noisanguan W (2010) Advances in phytoremediation research: a case study of Gynura pseudochina (L) DC. In: Fuerstner I (ed) Advanced knowledge application in practice. Sciyo, Croatia, pp 353–378

Norstrom A, Larsdotter K, Gumaelius L, Jansen JLC, Dalhammar G (2004) A small scale hydroponics wastewater treatment system under Swedish conditions. Water Sci Technol 48(11–12):161–167

Nouri J, Mahvi AH, Jahed GR, Babaei AA (2008) Regional distribution pattern of groundwater heavy metals resulting from agricultural activities. Environ Geo 55(6):1337–1343

Nouri J, Khorasani N, Lorestani B, Karami M, Hassani AH, Yousefi N (2009) Accumulation of heavy metals in soil and uptake by plant species with phytoremediation potential. Environ Earth Sci 59(2):315–323

Nowack B, Schulin R, Robinson BH (2006) Critical assessment of chelant-enhanced metal phytoextraction. Environ Sci Technol 40(17):5225–5232

Pagnanelli F, Viggi CC, Cibati A, Uccelletti D, Toroa L, Palleschi C (2012) Biotreatment of Cr(VI) contaminated waters by sulphate reducing bacteria fed with ethanol. J Hazard Mater 199–200:186–192

Paliwal V, Puranik S, Purohit HJ (2012) Integrated perspective of effective bioremediation. Appl Biochem Biotechnol 166:903–924

Pan XL (2009) Microbially induced carbonate precipitation as a promising way to in situ immobilize heavy metals in groundwater and sediment. Res J Chem Environ 13:3–4

Pierre V, Terry M, Madeleine SG (2011) Compartmentation of metals in foliage of Populus tremula grown on soil with mixed contamination. I. From the tree crown to leaf cell level. Environ Pollut 159:324–336

Pilon-Smits E (2005) Phytoremediation. Annu Rev Plant Biol 56:15–39

Pilon-Smits EAH, LeDuc DL (2009) Phytoremediation of selenium using transgenic plants. Curr Opin Biotechnol 20:207–212

Poirier I, Hammann P, Kuhn L, Bertrand M (2013) Strategies developed by the marine bacterium Pseudomonas fluorescens BA3SM1 to resist metals: a proteome analysis. Aquat Toxicol 128–129:215–232

Prado C, Rodríguez-Montelongo L, González JA, Pagano EA, Hilal M, Prado FE (2010) Uptake of chromium by Salvinia minima: effect on plant growth, leaf respiration and carbohydrate metabolism. J Hazard Mater 177(1–3):546–553

Prasad MNV (2007) Phytoremediation in India. In: Willey N (ed) Phytoremediation- methods and reviews. Humana Press, Totowa, New Jersey, pp 435–454

Prasad MNV, Freitas H (2003) Metal hyperaccumulation in plants-Biodiversity prospecting for phytoremediation technology. Electron J Biotechn 6:275–321

Purakayastha TJ, Chhonker PK (2001) Influence of vesicular arbuscular mycorrhizae fungi (Glomus etunicatum L) on mobilization of zinc in wetland rice (Oryza sativa L). Biol Fertility Soils 33:323–327

Rai PK (2009) Heavy metal phytoremediation from aquatic ecosystems with special reference to macrophytes. Crit Rev Environ Sci Technol 39(9):697–753

Rajaganapathy V, Xavier F, Sreekumar D, Mandal PK (2011) Heavy metal contamination in soil, water and fodder and their presence in livestock and products: a review. J Environ Sci Technol 4:234–249

Ramasamy RK, Congeevaram S, Thamaraiselvi K (2011) Evaluation of isolated fungal strain from e-waste recycling facility for effective sorption of toxic heavy metals Pb(II) ions and fungal protein molecular characterization-a Mycoremediation approach. Asian J Exp Biol 2(2):342–347

Ramos JL, Marques S, Dillewijn PV, Espinosa-Urgel M, Segura A, Duque E et al (2011) Laboratory research aimed at closing the gaps in microbial bioremediation. Trends Biotechnol 29(12):641–647

Rasmussen LD, Sorenson SJ, Turner RR, Barkay T (2000) Application of a merlux biosensor for estimating bioavailable mercury in soil. Soil Biol Biochem 32(5):639–649

Ravenscroft P, Brammer H, Richards K (2009) Arsenic pollution: a global synthesis. Royal geographical society, 1st edn. Willey Blackwell, New York

Rayu S, Karpouzas DG, Singh BK (2012) Emerging technologies in bioremediation: constraints and opportunities. Biodegradation 23:917–926

Robinson BH, Green SR, Chancerel B, Mills TM, Clothier BE (2007) Popular for the phytomanagement of boron contaminated sites. Environ Pollut 150:225–233

Robinson BH, Banuelos G, Conesa HM, Evangelou MWH, Schulin R (2009) The phytomanagement of trace elements in soil. Crit Rev Plant Sci 28(4):240–266

Robinson C, Brömssen MV, Bhattacharya P, Häller S, Bivén A, Hossain M, Jacks G, Ahmed KM, Hasan MA, Thunvik R (2011) Dynamics of arsenic adsorption in the targeted arsenic-safe aquifers in Matlab, south-eastern Bangladesh: insight from experimental studies. Appl Geochem 26:624–635

Ruiz ON, Alvarez D, Gonzalez-Ruiz G, Torres C (2011) Characterization of mercury bioremediation by transgenic bacteria expressing metallothionein and polyphosphate kinase. BMC Biotechnol 11:82–89

Sarma H (2011) Metal hyperaccumulation in plants: a review focussing on phytoremediation technology. J Environ Sci Technol 4(2):118–138

Saunders RJ, Paul NA, Hu Y, de Nys R (2012) Sustainable sources of biomass for bioremediation of heavy metals in wastewater derived from coal-fired power generation. PLoS ONE. doi: 10.1371/journal.pone.0036470

Say R, Yimaz N, Denizli A (2003) Removal of heavy metal ions using the fungus Penicillium canescens. Adsorpt Sci Technol 21:643–650

Schiewer S, Patil SB (2008) Pectin-rich fruit wastes as biosorbents for heavy metal removal: equilibrium and Kinetics. Bioresour Technol 99(6):1896–1903

Selvam A, Wong JW (2008) Phytochelatin synthesis and cadmium uptake of Brassica napus. Environ Technol 29:765–773

Seth CS, Chaturvedi PK, Misra V (2007) Toxic effect of arsenic and cadmium alone and in combination on Giant duckweed (Spirodela polyrrhiza L) in response to its accumulation. Environ Toxicol 22:539–549

Seth CS, Chaturvedi PK, Misra V (2008) The role of phytochelatins and antioxidants in tolerance to Cd accumulation in Brassica juncea L. Ecotoxicol Environ Saf 71:76–85

Seviour RJ, Mino T, Onuki M (2003) The microbiology of biological phosphorus removal in activated sludge systems. FEMS Microbiol Rev 27(1):99–127

Sharma RK, Agrawal M, Marshall F (2006) Heavy metal contamination in vegetables grown in wastewater irrigated areas of Varanasi. Bull Environ Contam Toxicol 77:312–318

Shirdam R, Khanafari A, Tabatabaee A (2006) Cadmium, nickel and vanadium accumulation by three strains of marine bacteria. Iran J Biotechnol 4(3):180–187

Siezen RJ, Galardini M (2008) Genomics of biological wastewater treatment. Microbial Biotech 1(5):333–340

Singh J, Kalamdhad AS (2013) Assessment of bioavailability and leachability of heavy metals during rotary drum composting of green waste (Water hyacinth). Ecol Eng 52:59–69

Singh JS, Abhilash PC, Singh HB, Singh RP, Singh DP (2011) Genetically engineered bacteria: an emerging tool for environmental remediation and future research perspectives. Gene 480:1–9

Singh RS, Tripathi N, Chaulya SK (2012) Ecological study of revegetated coal mine spoil of an India dry tropical ecosystem along an age gradient. Biodegradation 23:837–849

Singhal RK, Joshi S, Tirumalesh K, Gurg RP (2004) Reduction of uranium concentration in well water by Chlorella (Chlorella pyrendoidosa) a fresh water algae immobilized in calcium alginate. J Radioanal Nuclear Chem 261:73–78

Sivakumar D (2012) Experimental and analytical model studies on leachate volume computation from solid-waste. Int J Environ Sci Technol. doi: 10.1007/s13762-012-0083-1

Stamets P (2005) Mycelium running: how mushroom can help save the world. Ten Speed Press, Crown Publishing Group, New York

Stewart BD, Girardot C, Spycher N, Sani RK, Peyton BM (2013) Influence of chelating agents on biogenic uraninite reoxidation by Fe(III) hydroxides. Environ Sci Technol 47(1):364–371

Sud D, Mahajan G, Kaur MP (2008) Agricultural waste material as potential adsorbent for sequestering heavy metals ions from aqueous solutions: a review. Bioresour Technol 99(14):6017–6027

Tang CY, Criddle QS, Fu CS, Leckie JO (2007) Effect of flux (Transmembrane pressure) and membranes properties on fouling and rejection of reverse osmosis and nanofiltration membranes treating perfluorooctane sulfonate containing wastewater. Environ Sci Technol 41:2008–2014

Taştan BE, Ertuğrul S, Dönmez G (2010) Effective bioremoval of reactive dye and heavy metals by Aspergillus versicolor. Bioresour Technol 101(3):870–876

Thapa B, Kumar AKC, Ghimire A (2012) A review on bioremediation of petroleum hydrocarbon contaminants in soil. Kathmandu Univ J Sci Eng Tech 8(1):164–170

Tits J, Fujita T, Tsukamoto M, Wieland E (2008) Uranium (VI) uptake by synthetic calcium silicate hydrates. Mater Res Soc Symp P 1107:467–474

Tiwari S, Kumari B, Singh SN (2008) Evaluation of metal mobility/immobility in fly ash induced by bacterial strains isolated from rhizospheric Zone of Typha latifolia growing on fly ash dumps. Bioresour Technol 99:1305–1310

Tokuyama H, Hisaeda J, Nii S, Sakohara S (2010) Removal of heavy metal ions and humic acid from aqueous solutions by co-adsorption onto thermosensitive polymers. Separ Purif Technol 71(1):83–88

Tripathi RD, Dwivedi S, Shukla MK, Mishra S, Srivastava S, Singh R, Rai UN, Gupta DK (2008) Role of blue green algae biofertilizer in ameliorating the nitrogen demand and fly-ash stress to the growth and yield of rice (Oryza sativa L) plants. Chemosphere 70:1919–1929

Tripathi N, Singh RS, Chaulya SK (2012) Dump stability and soil fertility of a coal mine spoil in India dry tropical environment: a long-term study. Environ Manage 50(4):695–706

Tully BJ, Nelson WC, Heidelbert JF (2012) Metagenomic analysis of a complex marine planktonic thaumarchael community from the Gulf of Maine. Environ Microbiol 14(1):254–267

Tyagi M, Fonseca MMRD, Carvalho CCCRD (2011) Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes. Biodegradation 22:231–241

USEPA (2004) Cleaning up the nation’s waste sites: markets and technology trends. US Environmental Protection Agency, Washington

Vangronsveld J, Herzig R, Weyens N, Boulet J et al (2009) Phytoremediation of contaminated soils and groundwater: lessons from the field. Environ Sci Pollut Res 16:765–794

Vesely T, Tlustos P, Szakova J (2012) Organic acid enhanced soil risk element (Cd, Pb and Zn) leaching and secondary bioconcentration in water lettuce (Pistia stratiotes L) in the rhizofiltration process. Int J Phytoremediat 14(4):335–349

Vidali M (2001) Bioremediation. An overview. Pure Appl Chem 73(7):1163–1172

Viggi CC, Pagnanelli F, Cibati A, Uccelletti D, Palleschi C, Toro L (2010) Biotreatment and bioassessment of heavy metal removal by sulphate reducing bacteria in fixed bed reactors. Water Res 44(1):151–158

Vrionis HA, Anderson RT, Ortiz-Bernad I, O’Neill KR, Resch CT, Peacock AD, Dayvault R, White DC, Long PE, Lovley DR (2005) Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site. Appl Environ Microbiol 71:6308–6318

Vullo DL, Ceretti HM, Hughes EA, Ramyrez S, Zalts A (2008) Cadmium, zinc and copper biosorption mediated by Pseudomonas veronii 2E. Bioresour Technol 99:5574–5581

Wang GQ, Huang YZ, Xiao BY, Qian XC, Yao H, Hu Y, Gu YL, Zhang C, Liu KT (1997) Toxicity from water containing arsenic and fluoride in Xinjiang. Fluoride 30:81–84

Wang F, Lin X, Yin R (2005) Heavy metal uptake by arbuscular mycorrhizas of Elsholtzia splendens and the potential for phytoremediation of contaminated soil. Plant Soil 269:225–232

Wang S, Zhang D, Pan X (2012) Effects of arsenic on growth and photosystem II (PSII) activity of Microcystis aeruginosa. Ecotoxicol Environ Saf 84:104–111

Wang Y, Sevinc PC, Belchik SM, Fredrickson J, Shi L, Lu HP (2013) Singly-cell imaging and spectroscopic analyses of Cr(VI) reduction on the surface of bacterial cells. Langmuir 29(3):950–956

Wen YM, Lin HY, Wang QP, Chen ZL (2010) Bioleaching of heavy metals from sewage sludge using acidithiobacilus thiooxidans. 2nd international symposium on aqua science, water resource and low carbon energy, Sanya, December 7-10, 2009, AIP Conference Proceedings 1251:189–192

Wojas S, Hennig J, Plaza S, Geisler M, Siemianowski O et al (2009) Ectopic expression of Arabidopsis ABC transporter MRP7 modifies cadmium root-to-shoot transport and accumulation. Environ Pollut 157(10):2781–2789

Wu HB, Tang SR (2009) Using CO2 to increase the biomass of a Sorghum vulgare × Sorghum vugare var. Sudanese hybrid and Trifolium pretense L. and to trigger hyperaccumulation of cesium. J Hazard Mater 170:861–870

Wu G, Kang H, Zhang X, Shao H, Chu L, Ruan C (2010) A critical review on the bio-removal of hazardous heavy metals from contaminated soils: issues, progress, eco-environmental concerns and opportunities. J Hazard Mater 174(1–3):1–8

Wu L, Li Z, Akahane I, Liu L et al (2012) Effects of organic amendments on Cd, Zn and Cu bioavailability in soil with repeated phytoremediation by Sedum plumbizincicola. Int J Phytoremediat 14(10):1024–1038

Wuana RA, Okieimen FE, Imborvungu JA (2010) Removal of heavy metals from a contaminated soil using organic chelating acids. Int J Environ Sci Tech 7(3):485–496

Xu H, Chen Y, Huang H, Liu Y, Yang Z (2012) Removal of lead(II) and cadmium (II) from aqueous solutions using spent Agaricus bisporus. Can J Chem Eng (in press)

Yan DYS, Lo IMC (2012) Pyrophosphate coupling with chelant-enhanced soil flushing of field contaminated soils for heavy metal extraction. J Hazard Mater 199–200:51–57

Yin X, Yao C, Song J, Li Z, Zhang C et al (2009) Mercury contamination in vicinity of secondary copper smelters in Fuyang, Zhejiang Province, China; levels and contamination in top soils. Environ Pollut 157(6):1787–1793

Yin XX, Wang LH, Bai R, Huang H, Sun GX (2012) Accumulation and transformation of arsenic in the blue-green alga Synechocysis sp. PCC6803. Water Air Soil Pollut 223(3):1183–1190

Ylivainio K (2010) Effects of iron (III) chelates on the solubility of heavy metals in calcareous soils. Environ Pollut 158:3194–3200

Yuan X, Huang H, Zeng G, Li H, Wang J, Zhou C, Zhu H, Pei X, Liu Z, Liu Z (2011) Total concentrations and chemical speciation of heavy metals in liquefaction residues of sewage sludge. Bioresour Technol 102(5):4104–4110

Zarei M, Hempel S, Wubet T, Schafer T, Savaghebi G et al (2010) Molecular diversity of arbuscular mycorrhizal fungi in relation to soil chemical properties and heavy metal contamination. Environ Pollut 158:2757–2765

Zeftawy MAME, Mulligan CN (2011) Use of rhamnolipid to remove heavy metals from wastewater by micellar-enhanced ultrafiltration (MEUF). Separ Purif Technol 77(1):120–127