Analysis of chloroplast genomes and a supermatrix inform reclassification of the Rhodomelaceae (Rhodophyta)
Tóm tắt
With over a thousand species, the Rhodomelaceae is the most species‐rich family of red algae. While its genera have been assigned to 14 tribes, the high‐level classification of the family has never been evaluated with a molecular phylogeny. Here, we reassess its classification by integrating genome‐scale phylogenetic analysis with observations of the morphological characters of clades. In order to resolve relationships among the main lineages of the family we constructed a phylogeny with 55 chloroplast genomes (52 newly determined). The majority of branches were resolved with full bootstrap support. We then added 266
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Agardh C. A., 1822, Species algarum rite cognitae, cum synonymis, differentiis specificis et descriptionibus succinctis, 169
Agardh C. A., 1827, Aufzählung einiger in den östreichischen Ländern gefundenen neuen Gattungen und Arten von Algen, nebst ihrer Diagnostik und beigefügten Bemerkungen, Flora, 10, 625
Agardh J. G., 1890, Till algernes systematik. Nya bidrag. (Sjette afdelningen.), Lunds Universitets Års‐Skrift, Andra Afdelningen, Kongl. Fysiografiska Sällskapets i Lund Handlingar, 26, 1
Ardissone F., 1883, Phycologia mediterranea. Parte prima, Floridee, Mem. Soc. Crittog. Ital., 1, 1
Areschoug J. E., 1847, Phycearum, quae in maribus Scandinaviae crescunt, enumeratio. Sectio prior Fucaceas continens, Nova Acta Regiae Soc. Sci. Upsal., 13, 223
Børgesen F., 1920, The marine algae of the Danish West Indies. Part 3. Rhodophyceae (6), Dansk Bot. Ark., 3, 369
Dawson E. Y., 1944, The marine algae of the Gulf of California, Allan Hancock Pacific Expeditions, 3, 189
Falkenberg P., 1901, Die Rhodomelaceen des Golfes von Neapel und der angrenzenden Meeres‐Abschnitte, 754
Gray S. F., 1821, A Natural Arrangement of British Plants, 824
Greville R. K., 1823, Scottish Cryptogamic Flora, or Coloured Figures and Descriptions of Cryptogamic Plants, Belonging Chiefly to the Order Fungi; and Intended to Serve as a Continuation of English Botany. Vol. 2 (fasc. 7‐12)
Greville R. K., 1830, Algae Britannicae, or Descriptions of the Marine and Other Inarticulated Plants of the British Islands, Belonging to the Order Algae; with Plates Illustrative of the Genera, 218
Guiry M. D.&Guiry G. M.2017.AlgaeBase. World‐wide electronic publication National University of Ireland Galway. Available athttp://www.algaebase.org(searched on 26 January 2017).
Harvey W. H., 1844, Algae of Tasmania, London J. Bot., 3, 428
Harvey W. H., 1855, Some account of the marine botany of the colony of western Australia, Trans. R. I. Acad., 22, 525
Harvey W. H., 1859, Phycologia Australica… Vol. 2, [i]
Hollenberg G. J., 1967, New genera in the Rhodomelaceae from the Central Pacific, Bull. So. Calif. Acad. Sci., 66, 201
Hommersand M. H., 1963, The morphology and classification of some Ceramiaceae and Rhodomelaceae, Univ. Calif. Publ. Bot., 35, 165
Hughey J. R., 2016, Genomic and phylogenetic analysis of Ceramium cimbricum (Ceramiales, Rhodophyta) from the Atlantic and Pacific Oceans supports the naming of a new invasive Pacific entity Ceramium sungminbooi sp. nov, Bot. Mar., 59, 211, 10.1515/bot-2016-0036
Joly A. B., 1966, Spyridiocolax and Heterodasya two new genera of the Rhodophyceae, Sellowia, 18, 115
Kützing F. T., 1843, Phycologia generalis oder Anatomie, Physiologie und Systemkunde der Tange. Mit 80 farbig gedruckten Tafeln, gezeichnet und gravirt vom Verfasser, 458, 10.5962/bhl.title.4746
Kylin H., 1956, Die Gattungen der Rhodophyceen, 669
Lindauer V. W., 1949, Additions to the marine algae of New Zealand, Trans. R. Soc. New Zealand, 77, 390
Maggs C. A., 1993, Seaweeds of the British Isles. Volume 1 Rhodophyta. Part 3A Ceramiales, 464
Masuda M., 1982, A systematic study of the tribe Rhodomeleae (Rhodomelaceae, Rhodophyta), J. Fac. Sc. Hokkaido Univ. Ser. V, 12, 209
McIvor L. M.2000.Molecular systematics of the red algal order Ceramiales. PhD thesis Queen's University Belfast Belfast UK.
Morrill J., 1976, Notes on parasitic Rhodomelaceae, II: the morphology and systematic position of the parasitic red alga Jantinella verrucaeformis (Setchell and McFadden) Kylin, Proc. Acad. Nat. Sci. Phila., 127, 217
Nägeli C., 1846, Über Polysiphonia und Herposiphonia, Z. wiss. Bot., 4, 207
Phillips L. E., 2006, A re‐assessment of the species previously included in Lenormandiopsis including the description of Aneurianna gen. nov. (Rhodomelaceae, Ceramiales), Cryptogamie Algol., 27, 213
Phillips L. E., 2005, The terete and sub‐terete members of the red algal tribe Amansieae (Ceramiales, Rhodomelaceae), Cryptogamie Algol., 26, 5
Rosenberg T., 1933, Zur Anatomie und Entwicklungsgeschichte von Dasya arbuscula, Bot. Not., 1933, 535
Rousseau F., 2017, Molecular phylogenies support taxonomic revision of three species of Laurencia (Rhodomelaceae, Rhodophyta), Eur. J. Taxon., 269, 1
Rueness J., 1971, Polysiphonia hemisphaerica Aresch. in Scandinavia, Norw. J. Bot., 18, 65
Ruprecht F. J., 1850, Algae ochotenses. Die ersten sicheren Nachrichten über die Tange des Ochotskischen Meeres, 243
Saenger P., 1971, On the occurrence of Ophidocladus (Rhodomelaceae) in South Africa, J. S. Afr. Bot., 37, 291
Scagel R. F., 1953, A morphological study of some dorsiventral Rhodomelaceae, Univ. Calif. Publ. Bot., 27, 1
Schmitz F., 1889, Systematische Übersicht der bisher bekannten Gattungen der Florideen, Flora (Jena), 72, 435
Schmitz F., 1897, Die natürlichen Pflanzenfamilien nebst ihren Gattungen und wichtigeren Arten insbesondere den Nutzpflanzen unter Mitwirkung zahlreicher hervorragender Fachgelehrten, Teil 1, Abteilung 2, 421
Silva P. C., 1996, Catalogue of the benthic marine algae of the Indian Ocean, Univ. Calif. Publ. Bot., 79, 1
Taylor W. R., 1962, Marine algae from the tropical Atlantic Ocean: V. Algae from the Lesser Antilles, Contrib. U. S. Natl. Herb., 36, 43
Weber‐van Bosse A., 1911, Notice sur quelques genres nouveaux d'algues de l'Archipel Malaisien, Ann. Jard. Bot. Buitenzorg, 24, 25
Weber‐van Bosse A., 1929, Sur un nouveau genre de Floridés, Ann. Cryptog. Exot., 2, 255
Womersley H. B. S., 2003, The Marine Benthic Flora of Southern Australia. Rhodophyta. Part IIID. Ceramiales–Delesseriaceae, Sarcomeniaceae, Rhodomelaceae, 533
Womersley H. B. S., 2003, The Marine Benthic Flora of Southern Australia. Rhodophyta. Part IIID. Ceramiales–Delesseriaceae, Sarcomeniaceae, Rhodomelaceae, 235
Wynne M. J., 1970, Remarks on the genus Rhodolachne (Rhodomelaceae, Ceramiales), Rev. Algol., 10, 92
Wynne M. J., 1980, Beringiella (Rhodomelaceae, Ceramiales), a new red algal genus from Alaska, Contrib. Univ. Mich. Herb., 14, 221