Filtering and segmentation of 3D angiographic data: Advances based on mathematical morphology
Tài liệu tham khảo
Aylward, 2002, Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction, IEEE Transactions on Medical Imaging, 21, 61, 10.1109/42.993126
Aylward, 2003, Registration and analysis of vascular images, International Journal of Computer Vision, 55, 123, 10.1023/A:1026126900358
van Bemmel, 2003, Level-set-based artery-vein separation in blood pool agent CE-MR angiograms, IEEE Transactions on Medical Imaging, 22, 1224, 10.1109/TMI.2003.817756
Bouaynaya, 2008, Theoretical foundations of spatially-variant mathematical morphology. Part I: Binary images, IEEE Transactions on Pattern Analysis and Machine Intelligence, 30, 823, 10.1109/TPAMI.2007.70754
Bouaynaya, 2008, Theoretical foundations of spatially-variant mathematical morphology. Part II: Gray-level images, IEEE Transactions on Pattern Analysis and Machine Intelligence, 30, 837, 10.1109/TPAMI.2007.70756
Bouraoui, 2010, 3D segmentation of coronary arteries based on advanced mathematical morphology techniques, Computerized Medical Imaging and Graphics, 34, 377, 10.1016/j.compmedimag.2010.01.001
Boykov, Y., Jolly, M., 2001. Interactive graph cuts for optimal boundary & region segmentation of objects in N-D images. In: Proceedings of the ICCV, pp. 105–112.
Braga-Neto, 2002, Connectivity on complete lattices: new results, Computer Vision and Image Understanding, 85, 22, 10.1006/cviu.2002.0961
Breen, 1996, Attribute openings, thinnings, and granulometries, Computer Vision and Image Understanding, 64, 377, 10.1006/cviu.1996.0066
Caldairou, 2010, Attribute-filtering and knowledge extraction for vessel segmentation, 13
Chen, 2004, Quantifying 3-D vascular structures in MRA images using hybrid PDE and geometric deformable models, IEEE Transactions on Medical Imaging, 23, 1251, 10.1109/TMI.2004.834612
Chillet, 2003, Vascular atlas formation using a vessel-to-image affine registration method, 335
Chung, 2004, Vascular segmentation of phase contrast magnetic resonance angiograms based on statistical mixture modeling and local phase coherence, IEEE Transactions on Medical Imaging, 23, 1490, 10.1109/TMI.2004.836877
Cline, 2000, Combined connectivity and a gray-level morphological filter in magnetic resonance coronary angiography, Magnetic Resonance in Medicine, 43, 892, 10.1002/1522-2594(200006)43:6<892::AID-MRM16>3.0.CO;2-Q
Cousty, 2010, Segmentation of 4D cardiac MRI: automated method based on spatio-temporal watershed cuts, Image and Vision Computing, 28, 1229, 10.1016/j.imavis.2010.01.001
Deguchi, 2002, Detection and enhancement of line structures in an image by anisotropic diffusion, Pattern Recognition Letters, 23, 1399, 10.1016/S0167-8655(02)00100-9
Descoteaux, 2008, A geometric flow for segmenting vasculature in proton-density weighted MRI, Medical Image Analysis, 12, 497, 10.1016/j.media.2008.02.003
Dogdas, 2005, Segmentation of skull and scalp in 3-D human MRI using mathematical morphology, Human Brain Mapping, 26, 273, 10.1002/hbm.20159
Dokládal, 2003, Topologically controlled segmentation of 3D magnetic resonance images of the head by using morphological operators, Pattern Recognition, 36, 2463, 10.1016/S0031-3203(03)00118-3
Dokládal, 2008, Grey-scale morphology with spatially-variant rectangles in linear time, 674
Dufour, A., Passat, N., Naegel, B., Baruthio, J., 2011a. Interactive 3D brain vessel segmentation from an example. In: Proceedings of the ISBI, pp. 1121–1124.
Dufour, A., Tankyevych, O., Talbot, H., Ronse, C., Baruthio, J., Passat, N., 2011b. A statistical arteriovenous cerebral atlas. In: Proceedings MICCAI-CVII, pp. 73–80.
Dumoulin, 1991, Simultaneous acquisition of phase-contrast angiograms and stationary-tissue images with Hadamard encoding of flow-induced phase shifts, Journal of Magnetic Resonance Imaging, 1, 399, 10.1002/jmri.1880010403
Eichel, 1988, A method for a fully automatic definition of coronary arterial edges from cineangiograms, IEEE Transactions on Medical Imaging, 7, 313, 10.1109/42.14514
Faisan, 2011, Topology-preserving warping of binary images according to one-to-one mappings, IEEE Transactions on Image Processing, 20, 2135, 10.1109/TIP.2011.2158338
Flasque, 2001, Acquisition, segmentation and tracking of the cerebral vascular tree on 3D magnetic resonance angiography images, Medical Image Analysis, 5, 173, 10.1016/S1361-8415(01)00038-X
Frangi, 1999, Model-based quantitation of 3-D magnetic resonance angiographic images, IEEE Transactions on Medical Imaging, 18, 946, 10.1109/42.811279
Friman, 2009, Multiple hypothesis template tracking of small 3D vessel structures, Medical Image Analysis, 14, 160, 10.1016/j.media.2009.12.003
Gooya, 2008, A variational method for geometric regularization of vascular segmentation in medical images, IEEE Transactions on Image Processing, 17, 1295, 10.1109/TIP.2008.925378
Gui, L., Lisowski, R., Faundez, T., Huppi, P.S., Lazeyras, F., Kocher, M., 2011. Automatic segmentation of newborn brain MRI using mathematical morphology. In: Proceedings ISBI, pp. 2026–2030.
Guigues, 2006, Scale-sets image analysis, International Journal of Computer Vision, 68, 289, 10.1007/s11263-005-6299-0
Heijmans, 1991, Theoretical aspects of gray-level morphology, IEEE Transactions on Pattern Analysis and Machine Intelligence, 13, 568, 10.1109/34.87343
Hernandez, 2007, Non-parametric geodesic active regions: method and evaluation for cerebral aneurysms segmentation in 3DRA and CTA, Medical Image Analysis, 11, 224, 10.1016/j.media.2007.01.002
Holden, 2008, A review of geometric transformations for nonrigid body registration, IEEE Transactions on Medical Imaging, 27, 111, 10.1109/TMI.2007.904691
Jomier, 2004, Rigid and deformable vasculature-to-image registration: a hierarchical approach, 829
Jones, 1999, Connected filtering and segmentation using component trees, Computer Vision and Image Understanding, 75, 215, 10.1006/cviu.1999.0777
Kitamura, 1988, Estimating the 3D skeletons and transverse areas of coronary arteries from biplane angiograms, IEEE Transactions on Medical Imaging, 7, 173, 10.1109/42.7779
Kobashi, 2001, Volume-quantization-based neural network approach to 3D MR angiography image segmentation, Image and Vision Computing, 19, 185, 10.1016/S0262-8856(00)00067-6
Kong, 1989, Digital topology: introduction and survey, Computer Vision, Graphics, and Image Processing, 48, 357, 10.1016/0734-189X(89)90147-3
Krissian, 2000, Model-based detection of tubular structures in 3D images, Computer Vision and Image Understanding, 80, 130, 10.1006/cviu.2000.0866
Lesage, D., Angelini, E.D., Bloch, I., Funka-Lea, G., 2009a. Design and study of flux-based features for 3D vascular tracking, in: Proceedings of the ISBI, pp. 286–289.
Lesage, 2009, A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes, Medical Image Analysis, 13, 819, 10.1016/j.media.2009.07.011
Li, 2007, Vessels as 4-D curves: global minimal 4-D paths to extract 3-D tubular surfaces and centerlines, IEEE Transactions on Medical Imaging, 26, 1213, 10.1109/TMI.2007.903696
Lindeberg, 1994
Lindeberg, 1998, Feature detection with automatic scale selection, International Journal of Computer Vision, 30, 79, 10.1023/A:1008045108935
Lorenz, 1997, Multi-scale line segmentation with automatic estimation of width, contrast and tangential direction in 2D and 3D medical images, 233
Lorigo, 2001, CURVES: curve evolution for vessel segmentation, Medical Image Analysis, 5, 195, 10.1016/S1361-8415(01)00040-8
Manniesing, 2006, Vessel enhancing diffusion: a scale space representation of vessel structures, Medical Image Analysis, 10, 815, 10.1016/j.media.2006.06.003
Manniesing, 2007, Vessel axis tracking using topology constrained surface evolution, IEEE Transactions on Medical Imaging, 26, 309, 10.1109/TMI.2006.891503
Maragos, P., Vachier, C., 2009. Overview of adaptive morphology: trends and perspectives. In: Proceedings of the ICIP, pp. 2241–2244.
McGuinness, 2010, A comparative evaluation of interactive segmentation algorithms, Pattern Recognition, 43, 434, 10.1016/j.patcog.2009.03.008
Miyazaki, 2008, Nonenhanced MR angiography, Radiology, 248, 20, 10.1148/radiol.2481071497
Naegel, 2007, Using mathematical morphology for the anatomical labeling of vertebrae from 3D CT-scan images, Computerized Medical Imaging and Graphics, 31, 141, 10.1016/j.compmedimag.2006.12.001
Naegel, 2007, Segmentation using vector-attribute filters: methodology and application to dermatological imaging, 239
Naegel, 2007, Grey-level hit-or-miss transforms – Part I: Unified theory, Pattern Recognition, 40, 635, 10.1016/j.patcog.2006.06.004
Naegel, 2007, Grey-level hit-or-miss transforms – Part II: Application to angiographic image processing, Pattern Recognition, 40, 648, 10.1016/j.patcog.2006.06.011
Najman, 2006, Building the component tree in quasi-linear time, IEEE Transactions on Image Processing, 15, 3531, 10.1109/TIP.2006.877518
2010
Noblet, 2005, 3-D deformable image registration: a topology preservation scheme based on hierarchical deformation models and interval analysis optimization, IEEE Transactions on Image Processing, 14, 553, 10.1109/TIP.2005.846026
Noblet, 2006, Retrospective evaluation of a topology preserving non-rigid registration method, Medical Image Analysis, 10, 366, 10.1016/j.media.2006.01.001
Ouzounis, 2007, Mask-based second-generation connectivity and attribute filters, IEEE Transactions on Pattern Analysis and Machine Intelligence, 29, 990, 10.1109/TPAMI.2007.1045
Ouzounis, 2011, Hyperconnected attribute filters based on k-flat zones, IEEE Transactions on Pattern Analysis and Machine Intelligence, 33, 224, 10.1109/TPAMI.2010.74
Ozsarlak, 2004, MR angiography of the intracranial vessels: technical aspects and clinical applications, Neuroradiology, 46, 955, 10.1007/s00234-004-1297-9
Passat, 2011, Component-hypertrees for image segmentation, 284
Passat, 2011, Selection of relevant nodes from component-trees in linear time, 453
Passat, 2011, Interactive segmentation based on component-trees, Pattern Recognition, 44, 2539, 10.1016/j.patcog.2011.03.025
Passat, 2007, Watershed and multimodal data for vessel segmentation: Application to the superior sagittal sinus, Image and Vision Computing, 25, 512, 10.1016/j.imavis.2006.03.008
Passat, 2006, Magnetic resonance angiography: from anatomical knowledge modeling to vessel segmentation, Medical Image Analysis, 10, 259, 10.1016/j.media.2005.11.002
Passat, 2005, Region-growing segmentation of brain vessels: An atlas-based automatic approach, Journal of Magnetic Resonance Imaging, 21, 715, 10.1002/jmri.20307
Ronse, 1998, Set-theoretical algebraic approaches to connectivity in continuous or digital spaces, Journal of Mathematical Imaging and Vision, 8, 41, 10.1023/A:1008210216583
Sabry Hassouna, 2006, Cerebrovascular segmentation from TOF using stochastic models, Medical Image Analysis, 10, 2, 10.1016/j.media.2004.11.009
Salembier, 2000, Binary partition tree as an efficient representation for image processing, segmentation and information retrieval, IEEE Transactions on Image Processing, 9, 561, 10.1109/83.841934
Salembier, 1998, Anti-extensive connected operators for image and sequence processing, IEEE Transactions on Image Processing, 7, 555, 10.1109/83.663500
Salembier, 2009, Connected operators: a review of region-based morphological image processing techniques, IEEE Signal Processing Magazine, 26, 136, 10.1109/MSP.2009.934154
Sato, 1998, Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images, Medical Image Analysis, 2, 143, 10.1016/S1361-8415(98)80009-1
Schaap, 2009, Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms, Medical Image Analysis, 13, 701, 10.1016/j.media.2009.06.003
Serra, 1982
Serra, 1998, Connectivity on complete lattices, Journal of Mathematical Imaging and Vision, 9, 231, 10.1023/A:1008324520475
Suh, J.W., Scheinost, D., Qian, X., Sinusas, A.J., Breuer, C.K., Papademetris, X., 2010. Serial non rigid vascular registration using weighted normalized mutual information. In: Proceedings of the ISBI, pp. 25–28.
Sun, 2008, Morphological enhancement of vascular angiogram with multiscale detected by Gabor filters, Electronics Letters, 44, 86, 10.1049/el:20083469
Tankyevych, O., Talbot, H., Dokládal, P., Passat, N., 2009a. Direction-adaptive grey-level morphology. Application to 3D vascular brain imaging. In: Proceedings of the ICIP, pp. 2261–2264.
Tankyevych, 2009, Spatially variant morpho-Hessian filter: efficient implementation and application, 137
Tankyevych, 2011, Angiographic image analysis, 115
Thackray, 1993, Semi-automatic segmentation of vascular network images using a rotating structuring element (ROSE) with mathematical morphology and dual feature thresholding, IEEE Transactions on Medical Imaging, 12, 385, 10.1109/42.241865
Tizon, 2002, Segmentation with gray-scale connectedness can separate arteries and veins in MRA, Journal of Magnetic Resonance Imaging, 15, 438, 10.1002/jmri.10047
Tomasi, C., Manduchi, R., 1998. Bilateral filtering for gray and color images. In: Proceedings ICCV, pp. 839–846.
Urbach, 2005, Vector attribute filters, 95
Urbach, 2002, Shape-only granulometries and gray-scale shape filters, 305
Verdú-Monedero, 2008, Spatially-variant directional mathematical morphology operators based on a diffused average squared gradient field, 542
Vincent, 1991, Watersheds in digital spaces: an efficient algorithm based on immersion simulations, IEEE Transactions on Pattern Analysis and Machine Intelligence, 13, 583, 10.1109/34.87344
Westenberg, 2007, Volumetric attribute filtering and interactive visualization using the max-tree representation, IEEE Transactions on Image Processing, 16, 2943, 10.1109/TIP.2007.909317
Wilkinson, 2008, Concurrent computation of attribute filters on shared memory parallel machines, IEEE Transactions on Pattern Analysis and Machine Intelligence, 30, 1800, 10.1109/TPAMI.2007.70836
Wilkinson, 2001, Shape preserving filament enhancement filtering, 770
Wong, 2007, Probabilistic vessel axis tracing and its application to vessel segmentation with stream surfaces and minimum cost paths, Medical Image Analysis, 11, 567, 10.1016/j.media.2007.05.003
Xu, 1998, Snakes, shapes, and gradient vector flow, IEEE Transactions on Image Processing, 7, 359, 10.1109/83.661186
Zana, 2001, Segmentation of vessel-like patterns using mathematical morphology and curvature evaluation, IEEE Transactions on Image Processing, 10, 1010, 10.1109/83.931095