What can otolith shape analysis tell us about population structure of the European sardine, Sardina pilchardus, from Atlantic and Mediterranean waters?
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Agostini, 2002, ‘Ocean triads’ in the Mediterranean Sea: physical mechanisms potentially structuring reproductive habitat suitability (with example application to European anchovy, Engraulis encrasicolus), Fish. Oceanogr., 11, 129, 10.1046/j.1365-2419.2002.00201.x
Agüera, 2011, Use of saggital otolith shape analysis to discriminate Northeast Atlantic and Western Mediterranean stocks of Atlantic saury, Scomberesox saurus saurus (Walbaum), Fish. Res., 110, 465, 10.1016/j.fishres.2011.06.003
Alemany, 1993, Growth differences among sardine (Sardina pilchardus Walb.) populations in Western Mediterranean, Sci. Mar., 57, 229
Anderson, 2005
André, 2011, Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci, Heredity, 106, 270, 10.1038/hdy.2010.71
Andreu, 1969, Las branquispinas en la caracterización de las poblaciones de Sardina pilchardus (Walb.), Inv. Pesq., 33, 425
Antonakakis, 2011, Assessment of the sardine (Sardina pilchardus Walbaum, 1792) fishery in the eastern Mediterranean basin (North Aegean Sea), Mediterr. Mar. Sci., 12, 333, 10.12681/mms.36
Atarhouch, 2006, Signature of an early genetic bottleneck in a population of Moroccan sardines (Sardina pilchardus), Mol. Phylogenet. Evol., 39, 373, 10.1016/j.ympev.2005.08.003
Bacha, 2014, Population structure of the European anchovy, Engraulis encrasicolus, in the SW Mediterranean Sea, and the Atlantic Ocean: evidence from otolith shape analysis, ICES J. Mar. Sci., 10.1093/icesjms/fsu097
Baibai, 2012, First global approach: morphological and biological variability in a genetically homogeneous population of the European pilchard, Sardina pilchardus (Walbaum, 1792) in the North Atlantic coast, Rev. Fish Biol. Fish., 22, 63, 10.1007/s11160-011-9223-9
Begg, 1999, An holistic approach to fish stock identification, Fish. Res., 43, 35, 10.1016/S0165-7836(99)00065-X
Bradbury, 2010, Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature, Proc. R. Soc. B Biol. Sci., 277, 3725, 10.1098/rspb.2010.0985
Burke, 2008, Otolith shape analysis: its application for discriminating between stocks of Irish Sea and Celtic Sea herring (Clupea harengus) in the Irish Sea, ICES J. Mar. Sci. J. Cons., 65, 1670, 10.1093/icesjms/fsn177
Cadrin, 2000, Yellowtail flounder
Cadrin, 2013
Campana, 1993, Stock discrimination using otolith shape analysis, Can. J. Fish. Aquat. Sci., 50, 1062, 10.1139/f93-123
Campana, 1985, Microstructure of fish otoliths, Can. J. Fish. Aquat. Sci., 42, 1014, 10.1139/f85-127
Cardinale, 2004, Effects of sex, stock, and environment on the shape of known-age Atlantic cod (Gadus morhua) otoliths, Can. J. Fish. Aquat. Sci., 61, 158, 10.1139/f03-151
Carrera, 2003, Stock dynamic of the Iberian sardine (Sardina pilchardus, W.) and its implication on the fishery off Galicia (NW Spain), Sci. Mar., 67, 245, 10.3989/scimar.2003.67s1245
Chlaida, 2006, First approach for the identification of sardine populations Sardina pilchardus (Walbaum 1792) in the Moroccan Atlantic by allozymes, Mar. Biol., 149, 169, 10.1007/s00227-005-0185-0
Chlaida, 2009, Evidence of a genetic cline for Sardina pilchardus along the Northwest African coast, ICES J. Mar. Sci. J. Cons., 66, 264, 10.1093/icesjms/fsn206
Fadhlaoui-Zid, 2010, Mitochondrial DNA sequence variation in Tunisia sardine (Sardina pilchardus) stocks, 39
Fage, 1920, Rapport sur la sardine, 1
FAO, 2008
FAO, 2013, FAO Fisheries Department. Fishery Information. Data and Statistics Unit
GFCM, 2014, Structure minimum proposée pour la gestion des pêches relative à des études de cas choisies en Méditerranée (mer d'Alboran, détroit de Sicile, Méditerranée centrale et orientale)
Giannoulaki, 2011, Habitat suitability modelling for sardine juveniles (Sardina pilchardus) in the Mediterranean Sea, Fish. Oceanogr., 20, 367, 10.1111/j.1365-2419.2011.00590.x
Gonzalez, 2007, Relative role of life-history traits and historical factors in shaping genetic population structure of sardines (Sardina pilchardus), BMC Evol. Biol., 7, 197, 10.1186/1471-2148-7-197
Gonzalez-Salas, 2007, Interannual variability and intraannual stability of the otolith shape in European anchovy Engraulis encrasicolus (L.) in the Bay of Biscay, J. Fish Biol., 70, 35, 10.1111/j.1095-8649.2006.01243.x
Heino, 2013, The importance of metacommunity ecology for environmental assessment research in the freshwater realm, Biol. Rev., 88, 166, 10.1111/j.1469-185X.2012.00244.x
ICES, 2009
ICES, 2013
Ihssen, 1981, Stock identification: materials and methods, Can. J. Fish. Aquat. Sci., 38, 1838, 10.1139/f81-230
Iwata, 2002, SHAPE: a computer program package for quantitative evaluation of biological shapes based on elliptic Fourier descriptors, J. Hered., 93, 384, 10.1093/jhered/93.5.384
Kasapidis, 2014, Phylogeography and population genetics, 43
Kasapidis, 2011, Evidence for microsatellite hitchhiking selection in European sardine (Sardina pilchardus) and implications in inferring stock structure, Sci. Mar., 76, 123, 10.3989/scimar.03366.29B
Kuhl, 1982, Elliptic Fourier features of a closed contour, Comput. Graph. Image Process., 18, 236, 10.1016/0146-664X(82)90034-X
Laurent, 2007, Effective population size estimation on Sardina pilchardus in the Bay of Biscay using a temporal genetic approach, Biol. J. Linn. Soc., 90, 591, 10.1111/j.1095-8312.2007.00747.x
Limborg, 2012, Imprints from genetic drift and mutation imply relative divergence times across marine transition zones in a pan-European small pelagic fish (Sprattus sprattus), Heredity, 109, 96, 10.1038/hdy.2012.18
Lleonart, 2003, Fish stock assessments in the Mediterranean: state of the art, Sci. Mar., 67, 37, 10.3989/scimar.2003.67s137
Lleonart, 2000, Removing allometric effects of body size in morphological analysis, J. Theor. Biol., 205, 85, 10.1006/jtbi.2000.2043
Lombarte, 1993, Otolith size changes related with body growth, habitat depth and temperature, Environ. Biol. Fish, 37, 297, 10.1007/BF00004637
Parrish, 1989, The monotypic sardines, Sardina and Sardinops: their taxonomy, distribution, stock structure, and zoogeography, Can. J. Fish. Aquat. Sci., 46, 2019, 10.1139/f89-251
Peleteiro, 2004, Sardine tagging off the Iberian peninsula: laboratory experiments and operations at sea, ICES CM 2004/Q, 20
Ramon, 1997, Genetic variation in natural stocks of Sardina pilchardus (sardines) from the western Mediterranean Sea, Heredity, 78, 10.1038/hdy.1997.81
Reiss, 2009, Genetic population structure of marine fish: mismatch between biological and fisheries management units, Fish Fish., 10, 361, 10.1111/j.1467-2979.2008.00324.x
Rohlf, 1984, A comparison of Fourier methods for the description of wing shape in mosquitoes (Diptera: Culicidae), Syst. Biol., 33, 302
Roldán, 1998, Population genetic structure of European hake, Merluccius merluccius, Heredity, 81, 327, 10.1046/j.1365-2540.1998.00383.x
Ruggeri, 2012, Temporal genetic variation as revealed by a microsatellite analysis of European sardine (Sardina pilchardus) archived samples, Can. J. Fish. Aquat. Sci., 69, 1698, 10.1139/f2012-092
SAS Institute Inc, 2013
Sadighzadeh, 2014, Use of otolith shape for stock identification of John's snapper, Lutjanus johnii (Pisces: Lutjanidae), from the Persian Gulf and the Oman Sea, Fish. Res., 155, 59, 10.1016/j.fishres.2014.02.024
Silva, 2003, Morphometric variation among sardine (Sardina pilchardus) populations from the northeastern Atlantic and the western Mediterranean, ICES J. Mar. Sci. J. Cons., 60, 1352, 10.1016/S1054-3139(03)00141-3
Silva, 2008, Geographic variability of sardine growth across the northeastern Atlantic and the Mediterranean Sea, Fish. Res., 90, 56, 10.1016/j.fishres.2007.09.011
Silva, 2009, Geographic variability of sardine dynamics in the Iberian Biscay region, ICES J. Mar. Sci. J. Cons., 66, 495, 10.1093/icesjms/fsn225
Siokou-Frangou, 2010, Plankton in the open Mediterranean Sea: a review, Biogeosciences, 7, 1543, 10.5194/bg-7-1543-2010
Spanakis, 1989, Genetic differences between populations of sardine, Sardina pilchardus, and anchovy, Engraulis encrasicolus, in the Aegean and Ionian seas, J. Fish Biol., 35, 417, 10.1111/j.1095-8649.1989.tb02993.x
Stransky, 2008, Otolith shape analysis as a tool for stock separation of horse mackerel (Trachurus trachurus) in the Northeast Atlantic and Mediterranean, Fish. Res., 89, 159, 10.1016/j.fishres.2007.09.017
Thorpe, 1975, Quantitative handling of characters useful in snake systematics with particular reference to intraspecific variation in the ringed snake Natrix natrix (L.), Biol. J. Linn. Soc., 7, 27, 10.1111/j.1095-8312.1975.tb00732.x
Tinti, 2002, Mitochondrial DNA sequence variation suggests the lack of genetic heterogeneity in the Adriatic and Ionian stocks of Sardina pilchardus, Mar. Biotechnol., 4, 163, 10.1007/s10126-002-0003-3
Torres, 2000, Sagittal otolith size and shape variability to identify geographical intraspecific differences in three species of the genus Merluccius, J. Mar. Biol. Assoc. UK, 80, 333, 10.1017/S0025315499001915
Traina, 2011, Assessing population structure of European Anchovy (Engraulis encrasicolus) in the Central Mediterranean by means of traditional morphometry, Adv. Oceanogr. Limnol., 2, 141, 10.1080/19475721.2011.592401
Tsikliras, 2013, Growth and reproduction of European sardine, Sardina pilchardus (Pisces: Clupeidae), in northeastern Mediterranean, Cah. Biol. Mar., 54, 365
Tuset, 2003, Shape indices to identify regional differences in otolith morphology of comber, Serranus cabrilla (L., 1758), J. Appl. Ichthyol., 19, 88, 10.1046/j.1439-0426.2003.00344.x
Vignon, 2012, Ontogenetic trajectories of otolith shape during shift in habitat use: interaction between otolith growth and environment, J. Exp. Mar. Biol. Ecol., 420, 26, 10.1016/j.jembe.2012.03.021