An individual-based probabilistic model for simulating fisheries population dynamics

Alonzo, 2008, The importance of incorporating protogynous sex change into stock assessments, Bulletin of Marine Science, 83, 163 ASMFC, 2009 ASMFC, 2012 Cadrin, 2009, Accounting for spatial population structure in stock assessment: Past, present and future, 405 Chen, 2003, Quantity of fisheries data and uncertainty in stock assessment, Aquatic Science, 65, 92, 10.1007/s000270300008 Chen, 2003, Developing a growth-transition matrix for the stock assessment of the green sea urchin (Strongylocentrotus droebachiensis) off Maine, Fishery Bulletin, 101, 737 Cope, 2011, Reconciling stock assessment and management scales under conditions of spatially varying catch histories, Fisheries Research, 107, 22, 10.1016/j.fishres.2010.10.002 Deroba, 2013, Performance of stock assessments with misspecified age-and time-varying natural mortality, Fisheries Research, 146, 27, 10.1016/j.fishres.2013.03.015 Francis, 1992, Use of risk analysis to assess fishery management strategies: A case study using orange roughy (Hoplostethus atlanticus) on the Chatham Rise, New Zealand, Canadian Journal of Fisheries and Aquatic Sciences, 49, 922, 10.1139/f92-102 Grimm, 2005 Guan, 2013, Impacts of population and fishery spatial structures on fishery stock assessment, Canadian Journal of Fisheries and Aquatic Sciences, 70, 1178, 10.1139/cjfas-2012-0364 Hilborn, 1992 Kanaiwa, 2008, Evaluating a seasonal, sex-specific size-structured stock assessment model for the American lobster, Homarus americanus, Marine and Freshwater Research, 59, 41, 10.1071/MF07121 Kanwit, 2009, Seasonal movements of atlantic herring (Clupea harengus): Results from a four year tagging study conducted in the Gulf of Maine and Southern New England, Journal of the Northwest Atlantic Fishery Science, 40, 29, 10.2960/J.v40.m577 Legault, 1998, 49, 246 Maunder, 2013, A review of integrated analysis in fisheries stock assessment, Fisheries Research, 142, 61, 10.1016/j.fishres.2012.07.025 Overholtz, 2004 Punt, 2003, The performance of a size-structured stock assessment method in the face of spatial heterogeneity in growth, Fisheries Research, 65, 391, 10.1016/j.fishres.2003.09.028 Quinn, 1999 Reid, 1999 Richards, 2012, Climate change and northern shrimp recruitment variability in the Gulf of Maine, Marine Ecology Progress Series, 464, 167, 10.3354/meps09869 Scheffer, 1995, Super-individuals a simple solution for modelling large populations on an individual basis, Ecological modelling, 80, 161, 10.1016/0304-3800(94)00055-M Shepherd, 2009 Tyler, 1994, Individual variability and spatial heterogeneity in fish population models, Reviews in Fish Biology and Fisheries, 4, 91, 10.1007/BF00043262 Werner, 2001, Spatially-explicit individual based modeling of marine populations: A review of the advances in the 1990s, Sarsia, 86, 411, 10.1080/00364827.2001.10420483 Wilson, 2009, Self-organizing economic activity with costly information