Quantitative differential expression analysis reveals miR-7 as major islet microRNA

Biochemical and Biophysical Research Communications - Tập 366 - Trang 922-926 - 2008
Valia Bravo-Egana1, Samuel Rosero1, R. Damaris Molano1, Antonello Pileggi1, Camillo Ricordi1, Juan Domínguez-Bendala1, Ricardo L. Pastori1
1Diabetes Research Institute, University of Miami Leonard M. Miller School of Medicine, 1450 NW 10th Avenue, Miami, FL 33136, USA

Tài liệu tham khảo

Bartel, 2004, MicroRNAs: genomics, biogenesis, mechanism, and function, Cell, 116, 281, 10.1016/S0092-8674(04)00045-5 Lee, 1993, The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14, Cell, 75, 843, 10.1016/0092-8674(93)90529-Y Kim, 2006, Genomics of microRNA, Trends Genet., 22, 165, 10.1016/j.tig.2006.01.003 Griffiths-Jones, 2004, The microRNA registry, Nucleic Acids Res., 32, D109, 10.1093/nar/gkh023 Landgraf, 2007, A mammalian microRNA expression atlas based on small RNA library sequencing, Cell, 129, 1401, 10.1016/j.cell.2007.04.040 Poy, 2004, A pancreatic islet-specific microRNA regulates insulin secretion, Nature, 432, 226, 10.1038/nature03076 Plaisance, 2006, MicroRNA-9 controls the expression of Granuphilin/Slp4 and the secretory response of insulin-producing cells, J. Biol. Chem., 281, 26932, 10.1074/jbc.M601225200 Wienholds, 2005, MicroRNA expression in zebrafish embryonic development, Science, 309, 310, 10.1126/science.1114519 Lagos-Quintana, 2002, Identification of tissue-specific microRNAs from mouse, Curr. Biol., 12, 735, 10.1016/S0960-9822(02)00809-6 Baskerville, 2005, Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes, RNA, 11, 241, 10.1261/rna.7240905 Suh, 2004, Human embryonic stem cells express a unique set of microRNAs, Dev. Biol., 270, 488, 10.1016/j.ydbio.2004.02.019 Lynn, 2007, MicroRNA expression is required for pancreatic islet cell genesis in the mouse, Diabetes, 10.2337/db07-0175 Kloosterman, 2007, Targeted inhibition of miRNA maturation with morpholinos reveals a role for miR-375 in pancreatic islet development, PLoS Biol., 5, e203, 10.1371/journal.pbio.0050203 Pileggi, 2006, Reversal of diabetes by pancreatic islet transplantation into a subcutaneous, neovascularized device, Transplantation, 81, 1318, 10.1097/01.tp.0000203858.41105.88 Bravo, 2007, Instability of miRNA and cDNAs derivatives in RNA preparations, Biochem. Biophys. Res. Commun., 353, 1052, 10.1016/j.bbrc.2006.12.135 Bolstad, 2003, A comparison of normalization methods for high density oligonucleotide array data based on variance and bias, Bioinformatics, 19, 185, 10.1093/bioinformatics/19.2.185 Tusher, 2001, Significance analysis of microarrays applied to the ionizing radiation response, Proc. Natl. Acad. Sci. USA, 98, 5116, 10.1073/pnas.091062498 Chen, 2005, Real-time quantification of microRNAs by stem-loop RT-PCR, Nucleic Acids Res., 33, e179, 10.1093/nar/gni178 Li, 2005, A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye, Cell, 123, 1267, 10.1016/j.cell.2005.10.040 Tessmar-Raible, 2007, Conserved sensory-neurosecretory cell types in annelid and fish forebrain: insights into hypothalamus evolution, Cell, 129, 1389, 10.1016/j.cell.2007.04.041 Eisen, 1998, Cluster analysis and display of genome-wide expression patterns, Proc. Natl. Acad. Sci. USA, 95, 14863, 10.1073/pnas.95.25.14863