Structural basis for the regulation of splicing of a yeast messenger RNA
Tài liệu tham khảo
Amrein, 1988, The sex-determining genetra-2 of Drosophila encodes a putative RNA binding protein, Cell, 55, 1025, 10.1016/0092-8674(88)90247-4
Baker, 1989, Sex in flies: the splice of life, Nature, 340, 521, 10.1038/340521a0
Bandziulis, 1989, RNA-binding proteins as developmental regulators, Genes Dev., 3, 431, 10.1101/gad.3.4.431
Bell, 1988, Sex-lethal, a Drosophila sex determination switch gene, exhibits sex-specific RNA splicing and sequence similarity to RNA binding proteins, Cell, 55, 1037, 10.1016/0092-8674(88)90248-6
Berkhout, 1989, Tat transactivates the human immunodeficiency virus through a nascent RNA target, Cell, 59, 273, 10.1016/0092-8674(89)90289-4
Bingham, 1988, On/off regulation of gene expression at the level of splicing, Trends Genet., 4, 134, 10.1016/0168-9525(88)90136-9
Bozzoni, 1984, Expression of twoXenopus laevis ribosomal protein genes in injected frog oocytes. A specific splicing block interferes with the L1 RNA maturation, J. Mol. Biol., 180, 987, 10.1016/0022-2836(84)90267-5
Caffarelli, 1987, The accumulation of mature RNA for theXenopus laevis ribosomal protein L1 is controlled at the level of splicing and turnover of the precursor RNA, EMBO J., 6, 3493, 10.1002/j.1460-2075.1987.tb02674.x
Casey, 1988, Iron-responsive elements: regulatory RNA sequences that control mRNA levels and translation, Science, 240, 924, 10.1126/science.2452485
Chang, 1990, Messenger RNA transport and HIVrev regulation, Science, 249, 614, 10.1126/science.2143313
Chou, 1987, Developmental expression of a regulatory gene is programmed at the level of splicing, EMBO J., 6, 4095, 10.1002/j.1460-2075.1987.tb02755.x
Dabeva, 1987, The yeast ribosomal protein L32 and its gene, J. Biol. Chem., 262, 16055, 10.1016/S0021-9258(18)47695-8
Dabeva, 1986, Autogenous regulation of splicing of the transcript of a yeast ribosomal protein gene, 83, 5854
Draper, 1989, How do proteins recognize specific RNA sites? New clues from autogenously regulated ribosomal proteins, Trends Biochem. Sci., 14, 335, 10.1016/0968-0004(89)90167-9
Freier, 1986, Improved free energy parameters for predictions of RNA duplex stability, 83, 9373
Fu, 1988, Multiple cis-acting sequence elements are required for efficient splicing of simian virus 40 small-t antigen pre-mRNA, Mol. Cell. Biol., 8, 3582
Go, 1990, A protein factor, ASF, controls cell specific alternative splicing of SV40 early pre-mRNA in vitro, Cell, 62, 25, 10.1016/0092-8674(90)90236-8
Gutell, 1986, Higher order structure in ribosomal RNA, EMBO J., 5, 1111, 10.1002/j.1460-2075.1986.tb04330.x
Higuchi, 1988, A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions, Nucl. Acids Res., 16, 7351, 10.1093/nar/16.15.7351
Hill, 1986, Yeast/E coli shuttle vectors with multiple unique restriction sites, Yeast, 2, 163, 10.1002/yea.320020304
Inoue, 1990, Binding of theDrosophile sex-lethal gene product to the alternative splice site oftransformer primary transcript, Nature, 344, 461, 10.1038/344461a0
Ito, 1983, Transformation of intact yeast cells treated with alkali cations, J. Bacteriol., 153, 163, 10.1128/jb.153.1.163-168.1983
Johnson, 1987, Phosphorylation of theSaccharomyces cerevisiae equivalent of ribosomal protein S6 has no detectable effect on growth, Mol. Cell. Blol., 7, 1338
Kim, 1983, The mRNA for ribosomal proteins in yeast, J. Mol. Biol., 165, 79, 10.1016/S0022-2836(83)80243-5
Koeller, 1989, A cytosolic protein binds to structural elements within the iron regulatory region of the transterrin receptor mRNA, 86, 3574
Kretzner, 1990, Saccharomyces carevisiae U1 small nuclear RNA secondary structure contains both universal and yeast-specific domains, 87, 851
Kruse, 1985, Phosphorylation of the yeast equivalent of ribosomal protein S6 is essential for growth, 82, 7515
Laski, 1986, Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing, Cell, 44, 7, 10.1016/0092-8674(86)90480-0
Leer, 1985, Yeast contains two functional genes coding for ribosomal protein S10, Nucl. Acids Res., 13, 5027, 10.1093/nar/13.14.5027
Legrain, 1989, Somecis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm, Cell, 57, 573, 10.1016/0092-8674(89)90127-X
Maniatis, 1991, Mechanisms of alternative pre-mRNA splicing, Science, 251, 33, 10.1126/science.1824726
McKeown, 1990, Regulation of alternative splicing, Genet. Eng., 12, 139, 10.1007/978-1-4613-0641-2_9
Nagohi, 1990, Regulation of sex-specific RNA splicing at theDrosophila doublesex gene:cis-acting mutations in axon sequences alter sex-specific RNA splicing patterns, Genes Dev., 4, 89, 10.1101/gad.4.1.89
Newman, 1987, Specific accesory sequences inSaccharomyces cerevisiae introns control assembly of pre-mRNA into spliceosomes, EMBO J., 6, 3833, 10.1002/j.1460-2075.1987.tb02720.x
Nomura, 1984, Regulation of the synthesis of ribosomes and ribosomal components, Annu. Rev. Biochem., 53, 75, 10.1146/annurev.bi.53.070184.000451
Olsen, 1990, Secondary structure is the major determinant for interaction of HIV rev protein with RNA, Science, 247, 845, 10.1126/science.2406903
Pace, 1989, Phylogenetic comparative analysis and the secondary structure of ribonuclease P RNA—a review, Gene, 82, 65, 10.1016/0378-1119(89)90031-0
Pearson, 1982, Yeast use translational control to compensate for extra copies of a ribosomal protein gene, Cell, 29, 347, 10.1016/0092-8674(82)90151-9
Pikielny, 1985, mRNA splicing efficiency in yeast and the contribution of nonconserved sequences, Cell, 41, 119, 10.1016/0092-8674(85)90066-2
Potashkin, 1990, Differential distribution of factors involved in pre-mRNA processing in the yeast cell nucleus, Mol. Cell. Biol., 10, 3524
Reed, 1986, A role for axon sequences and splice-site proximity in splice-site selection, Cell, 46, 681, 10.1016/0092-8674(86)90343-0
Ruby, 1988, An early hierarchic role of U1 small nuclear ribonucleoprotein in spliceosome assembly, Science, 242, 1028, 10.1126/science.2973660
Sayers, 1988, 5′-3′ exonuclease in phosphorothionate-based oligonucleotide-directed mutagenesis, Nucl. Acids Res., 16, 791, 10.1093/nar/16.3.791
Seraphin, 1989, Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing, Cell, 59, 349, 10.1016/0092-8674(89)90296-1
Siebel, 1990, Regulated splicing of the Drosophila P transposable element third intronin vitro: somatic repression, Science, 248, 1200, 10.1126/science.2161558
Smith, 1989, Alternative splicing in control of gene expression, Annu. Rev. Genet., 23, 527, 10.1146/annurev.ge.23.120189.002523
Sosnowski, 1989, Sex-specific alternative splicing of RNA from thetransformer gene results from sequence-dependent splice site blockage, Cell, 58, 449, 10.1016/0092-8674(89)90426-1
Swida, 1988, A nonconserved sequence in the 5′ region of theCYH2 intron fromSaccharomyces cerevislas controls splicing efficiency of the pre-mRNA, Yeast, 4, 209, 10.1002/yea.320040306
Thomas, 1980, Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose, 77, 5201
Warner, 1977, Distribution of newly formed ribosomal proteins in HeLa cell fractions, J. Cell Biol., 80, 767, 10.1083/jcb.80.3.767
Warner, 1985, Saccharomyces cerevislae coordinates the accumulation of yeast ribosomal proteins by modulating mRNA splicing, translational initiation, and protein turnover, Mol. Cell. Bol., 5, 1512
Wittekind, 1990, Conditional expression ofRPA190, the gene encoding the largest subunit of yeast RNA potymerase I: effects of decreased rRNA synthesis on ribosomal protein synthesis, Mol. Cell. Biol., 10, 2049
Woolford, 1989, Nuclear pre-mRNA splicing in yeast, Yeast, 5, 439, 10.1002/yea.320050604
Wray, 1987, Characterization of a positive regulatory gene, LAC9, that controls induction of the lactose-galactose regulon ofKluveromyces lactis: structural and functional relationships toGAL4 ofSaccharomyces cerevislae, Moll. Cell. Biol., 7, 1111