Development of DNA methylation markers for sperm, saliva and blood identification using pyrosequencing and qPCR/HRM
Tài liệu tham khảo
Lee, 2012, Potential forensic application of DNA methylation profiling to body fluid identification, Int. J. Leg. Med., 126, 55, 10.1007/s00414-011-0569-2
Butler, 2010
Virkler, 2009, Analysis of body fluids for forensic purposes: from laboratory testing to non-destructive rapid confirmatory identification at a crime scene, Forensic Sci. Int. Genet., 188, 1, 10.1016/j.forsciint.2009.02.013
Miranda, 2007, DNA methylation: the nuts and bolts of repression, J. Cell. Physiol., 213, 384, 10.1002/jcp.21224
Bird, 2002, DNA methylation patterns and epigenetic memory, Genes Dev., 16, 6, 10.1101/gad.947102
Voet, 2011
Frumkin, 2011, DNA methylation-based forensic tissue identification, Forensic Sci. Int. Genet., 5, 517, 10.1016/j.fsigen.2010.12.001
Hashimshony, 2003, The role of DNA methylation in setting up chromatin structure during development, Nat. Genet., 34, 187, 10.1038/ng1158
Ohgane, 2008, Epigenetics: the DNA methylation profile of tissue-dependent and differentially methylated regions in cells, Placenta, 29, S29, 10.1016/j.placenta.2007.09.011
Kitamura, 2007, Analysis of tissue-specific differentially methylated regions (TDMs) in humans, Genomics, 89, 326, 10.1016/j.ygeno.2006.11.006
Igarashi, 2008, Quantitative analysis of human tissue-specific differences in methylation, Biochem. Biophys. Res. Commun., 376, 658, 10.1016/j.bbrc.2008.09.044
Song, 2009, Tissue specific differentially methylated regions (TDMR): changes in DNA methylation during development, Genomics, 93, 130, 10.1016/j.ygeno.2008.09.003
Song, 2005, Association of tissue-specific differentially methylated regions (TDMs) with differential gene expression, Proc. Natl. Acad. Sci. U.S.A., 102, 3336, 10.1073/pnas.0408436102
Shen, 2007, Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters, PLoS Genet., 3, e181, 10.1371/journal.pgen.0030181
Madi, 2012, The determination of tissue‐specific DNA methylation patterns in forensic biofluids using bisulfite modification and pyrosequencing, Electrophoresis, 33, 1736, 10.1002/elps.201100711
Vidaki, 2013, Forensic DNA methylation profiling—potential opportunities and challenges, Forensic Sci. Int. Genet., 7, 499, 10.1016/j.fsigen.2013.05.004
Gut, 2004, DNA analysis by MALDI‐TOF mass spectrometry, Hum. Mutat., 23, 437, 10.1002/humu.20023
Richards, 2018, Evaluation of massively parallel sequencing for forensic DNA methylation profiling, Electrophoresis, 39, 2798, 10.1002/elps.201800086
Wittwer, 2009, High-resolution DNA melting analysis: advancements and limitations, Hum. Mutat., 30, 857, 10.1002/humu.20951
Antunes, 2016, Forensic discrimination of vaginal epithelia by DNA methylation analysis through pyrosequencing, Electrophoresis, 37, 2751, 10.1002/elps.201600037
Park, 2014, Identification of body fluid-specific DNA methylation markers for use in forensic science, Forensic Sci. Int. Genet., 13, 147, 10.1016/j.fsigen.2014.07.011
Forat, 2016, Methylation markers for the identification of body fluids and tissues from forensic trace evidence, PLoS One, 11
Hanson, 2013, 281
Comey, 1994, DNA extraction strategies for amplified fragment length polymorphism analysis, Forensic Sci. Int. Genet., 39, 1254
Webb, 2006, A comparison of the presumptive luminol test for blood with four non‐chemiluminescent forensic techniques, Luminescence, 21, 214, 10.1002/bio.908
An, 2013, DNA methylation-specific multiplex assays for body fluid identification, Int. J. Leg. Med., 127, 35, 10.1007/s00414-012-0719-1
Myers, 2008, Comparison of modern techniques for saliva screening, J. Forensic Sci., 53, 862, 10.1111/j.1556-4029.2008.00755.x
Shan, 2000, Identification of a novel neuromedin U receptor subtype expressed in the central nervous system, J. Biol. Chem., 275, 39482, 10.1074/jbc.C000522200
Guo, 2017, An E2-guided E3 screen identifies the RNF17-UBE2U pair as regulator of the radiosensitivity, immunodeficiency, dysmorphic features, and learning difficulties (RIDDLE) syndrome protein RNF168, J. Biol. Chem., 292, 967, 10.1074/jbc.M116.758854
Alghanim, 2018, DNA methylation assay based on pyrosequencing for determination of smoking status, Electrophoresis, 39, 2806, 10.1002/elps.201800098
Silva, 2016, Developmental validation studies of epigenetic DNA methylation markers for the detection of blood, semen and saliva samples, Forensic Sci. Int. Genet., 23, 55, 10.1016/j.fsigen.2016.01.017
Nagae, 2011, Tissue-specific demethylation in CpG-poor promoters during cellular differentiation, Hum. Mol. Genet., 20, 2710, 10.1093/hmg/ddr170
Fernandez, 2012, A DNA methylation fingerprint of 1628 human samples, Genome Res., 22, 407, 10.1101/gr.119867.110
Rakyan, 2008, An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs), Genome Res., 18, 1518, 10.1101/gr.077479.108
Fan, 2009, CpG island methylation pattern in different human tissues and its correlation with gene expression, Biochem. Biophys. Res. Commun., 383, 421, 10.1016/j.bbrc.2009.04.023
Lokk, 2014, DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns, Genome Biol., 15, 3248, 10.1186/gb-2014-15-4-r54
Wan, 2015, Characterization of tissue-specific differential DNA methylation suggests distinct modes of positive and negative gene expression regulation, BMC Genom., 16, 49, 10.1186/s12864-015-1271-4
Shewale, 2003, DNA profiling of azoospermic semen samples from vasectomized males by using Y-PLEX™ 6 amplification kit, J. Forensic Sci., 48, 1, 10.1520/JFS2002127
Burnett, 1962
Gauthier, 2019, Development of a body fluid identification multiplex via DNA methylation analysis, Electrophoresis, 40, 2565, 10.1002/elps.201900118
Haarmann-Stemmann, 2007, Analysis of the transcriptional regulation and molecular function of the aryl hydrocarbon receptor repressor in human cell lines, Drug Metab. Dispos., 35, 2262, 10.1124/dmd.107.016253
