Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification
Tài liệu tham khảo
Abarshi, 2010, Optimization of diagnostic RT-PCR protocols and sampling procedures for the reliable and cost-effective detection of Cassava brown streak virus, J. Virol. Methods, 163, 353, 10.1016/j.jviromet.2009.10.023
Abd El Wahed, 2013, A portable reverse transcription recombinase polymerase amplification assay for rapid detection of foot-and-mouth disease virus, PLOS ONE, 8, e71642, 10.1371/journal.pone.0071642
Aleman-Verdaguer, 1997, Analysis of the sequence diversity of the P1, HC, P3, NIb and CP genomic regions of several yam mosaic potyvirus isolates: implications for the intraspecies molecular diversity of potyviruses, J. Gen. Virol., 78, 1253, 10.1099/0022-1317-78-6-1253
Aleman, 1996, The complete nucleotide sequence of yam mosaic virus (Ivory Coast isolate) genomic RNA, Arch. Virol., 141, 1259, 10.1007/BF01718829
Amer, 2013, A new approach for diagnosis of bovine coronavirus using a reverse transcription recombinase polymerase amplification assay, J. Virol. Methods, 193, 337, 10.1016/j.jviromet.2013.06.027
Ampofo, 2010, Integrated crop management for sustainable yam production, 46
Asala, 2012, Distribution and incidence of viruses infecting yam (Dioscorea spp.) in Nigeria, Glob. J. Biosci. Biotechnol. Lett., 1, 163
Asiedu, 2010, Crops that feed the World 1. Yams: Yams for income and food security, Food Secur., 2, 305, 10.1007/s12571-010-0085-0
Bousalem, 2000, The use of phylogenetic data to develop molecular tools for the detection and genotyping of Yam mosaic virus Potential application in molecular epidemiology, J. Virol. Methods, 90, 25, 10.1016/S0166-0934(00)00198-1
Boyle, 2013, Rapid detection of HIV-1 proviral DNA for early infant diagnosis using recombinase polymerase amplification, MBio, 4, e00135, 10.1128/mBio.00135-13
Craw, 2012, Isothermal nucleic acid amplification technologies for point-of-care diagnostics: a critical review, Lab Chip, 12, 2469, 10.1039/c2lc40100b
Eni, 2010, Survey of the incidence and distribution of viruses infecting yam (Dioscorea spp.) in Ghana and Togo, Ann. Appl. Biol., 156, 243, 10.1111/j.1744-7348.2009.00383.x
Eni, 2008, Survey of the incidence and distribution of five viruses infecting yams in the major yam-producing zones in Benin, Ann. Appl. Biol., 153, 223
Eni, 2012, Re-evaluation of yam mosaic virus (YMV) detection methods, Acad. J. Plant Sci., 5, 18
Escadafal, 2014, Rapid molecular assays for the detection of yellow fever virus in low-resource settings, PLoS Negl. Trop. Dis., 8, e2730, 10.1371/journal.pntd.0002730
Euler, 2013, Development of a panel of recombinase polymerase amplification assays for detection of biothreat agents, J. Clin. Microbiol., 51, 1110, 10.1128/JCM.02704-12
Euler, 2012, Recombinase polymerase amplification assay for rapid detection of Francisella tularensis, J. Clin. Microbiol., 50, 2234, 10.1128/JCM.06504-11
Kenyon, 2008, Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: implications for international movement of yam germplasm, Arch. Virol., 153, 877, 10.1007/s00705-008-0062-5
Kenyon, 2001, An overview of viruses infecting Dioscorea yams in Sub-Saharan Africa, 432
Lillis, 2014, Non-instrumented incubation of a recombinase polymerase amplification assay for the rapid and sensitive detection of proviral HIV-1 DNA, PLOS ONE, 9, e108189, 10.1371/journal.pone.0108189
Mambole, 2014, Molecular characterization of yam virus X, a new potexvirus infecting yams (Dioscorea spp) and evidence for the existence of at least three distinct potexviruses infecting yams, Arch. Virol., 159, 3421, 10.1007/s00705-014-2211-3
Maroya, 2014, Yam improvement for income and food security in West Africa: effectiveness of a multi-disciplinary and multi-institutional team-work, J. Root Crops, 40, 85
Mekuria, 2014, Rapid and sensitive detection of little cherry virus 2 using isothermal reverse transcription-recombinase polymerase amplification, J. Virol. Methods, 205, 24, 10.1016/j.jviromet.2014.04.015
Menzel, 2014, Characterization of an isometric virus isolated from yam (Dioscorea rotundata) in Nigeria suggests that it belongs to a new species in the genus Aureusvirus, Arch. Virol., 159, 603, 10.1007/s00705-013-1845-x
Mumford, 1997, Rapid single-tube immunocapture RT-PCR for the detection of two yam potyviruses, J. Virol. Methods, 69, 73, 10.1016/S0166-0934(97)00141-9
Njukeng, 2005, Comparison of TAS-ELISA, dot and tissue blot, ISEM and immunocapture RT-PCR assays for the detection of Yam mosaic virus in yam tissues, Crop Prot., 24, 513, 10.1016/j.cropro.2004.10.002
Njukeng, 2014, Survey of the incidence and distribution of two viruses infecting yam (Dioscorea spp) in two agro-ecological zones of Cameroon, Int. J. Curr. Microbiol. Appl. Sci., 3, 1153
Notomi, 2000, Loop-mediated isothermal amplification of DNA, Nucleic Acids Res., 28, E63, 10.1093/nar/28.12.e63
Piepenburg, 2006, DNA detection using recombination proteins, PLoS Biol., 4, 1115, 10.1371/journal.pbio.0040204
Seal, 2014, The prevalence of badnaviruses in West African yams (Dioscorea cayenensis-rotundata) and evidence of endogenous pararetrovirus sequences in their genomes, Virus Res., 186, 144, 10.1016/j.virusres.2014.01.007
Teoh, 2015, Early detection of the dengue virus using reverse transcription-recombinase polymerase amplification, J. Clin. Microbiol., 53, 830, 10.1128/JCM.02648-14
Thouvenel, 1979, Yam mosaic, a new potyvirus infecting Dioscorea cayenensis in the Ivory Coast, Ann. Appl. Biol., 93, 279, 10.1111/j.1744-7348.1979.tb06542.x
Xia, 2014, Rapid detection of shrimp white spot syndrome virus by real time isothermal recombinase polymerase amplification assay, PLOS ONE, 9, e104667, 10.1371/journal.pone.0104667
Zanoli, 2013, Isothermal amplification methods for the detection of nucleic acids in microfluidic devices, Biosensors, 3, 18, 10.3390/bios3010018
Zhang, 2014, Rapid diagnostic detection of plum pox virus in Prunus plants by isothermal AmplifyRP (R) using reverse transcription-recombinase polymerase amplification, J. Virol. Methods, 207, 114, 10.1016/j.jviromet.2014.06.026