Fluorescence lifetime and polarization-resolved imaging in cell biology

Current Opinion in Biotechnology - Tập 20 - Trang 28-36 - 2009
James A Levitt1, Daniel R Matthews2, Simon M Ameer-Beg2,3, Klaus Suhling1
1Department of Physics, King's College London, Strand, London WC2R 2LS, UK
2Randall Division for Cell and Molecular Biophysics, King's College London, New Hunt's House, Guys Campus, London SE1 1UL, UK
3Dimbleby Department of Cancer Research, Division of Cancer Studies, King's College London, New Hunt's House, Guys Campus, London SE1 1UL, UK

Tài liệu tham khảo

Giepmans, 2006, Review—the fluorescent toolbox for assessing protein location and function, Science, 312, 217, 10.1126/science.1124618 Resch-Genger, 2008, Quantum dots versus organic dyes as fluorescent labels, Nat Methods, 5, 763, 10.1038/nmeth.1248 Festy, 2007, Imaging proteins in vivo using fluorescence lifetime microscopy, Mol Biosystems, 3, 381, 10.1039/b617204k Verveer, 2008, Quantitative microscopy and systems biology: seeing the whole picture, Histochem Cell Biol, 130, 833, 10.1007/s00418-008-0517-5 Hille, 2008, Time-domain fluorescence lifetime imaging for intracellular pH sensing in living tissues, Anal Bioanal Chem, 391, 1871, 10.1007/s00216-008-2147-0 Nakabayashi, 2008, Application of fluorescence lifetime imaging of enhanced green fluorescent protein to intracellular pH measurements, Photochem Photobiol Sci, 7, 668, 10.1039/b800391b van Manen, 2008, Refractive index sensing of green fluorescent proteins in living cells using fluorescence lifetime imaging microscopy, Biophys J, 94, L67, 10.1529/biophysj.107.127837 Tregidgo, 2008, Effect of refractive index on the fluorescence lifetime of green fluorescent protein, J Biomed Opt, 13, 031218, 10.1117/1.2937212 Kuimova, 2008, Molecular rotor measures viscosity of live cells via fluorescence lifetime imaging, J Am Chem Soc, 130, 6672, 10.1021/ja800570d De Beule, 2007, A hyperspectral fluorescence lifetime probe for skin cancer diagnosis, Rev Sci Instrum, 78, 123101, 10.1063/1.2818785 Galletly, 2008, Fluorescence lifetime imaging distinguishes basal cell carcinoma from surrounding uninvolved skin, Br J Dermatol, 159, 152, 10.1111/j.1365-2133.2008.08577.x Jares-Erijman, 2006, Imaging molecular interactions in living cells by FRET microscopy, Curr Opin Chem Biol, 10, 409, 10.1016/j.cbpa.2006.08.021 Padilla-Parra, 2008, Quantitative FRET analysis by fast acquisition time domain FLIM at high spatial resolution in living cells, Biophys J, 95, 2976, 10.1529/biophysj.108.131276 Domingo, 2007, Imaging FRET standards by steady-state fluorescence and lifetime methods, Microsc Res Tech, 70, 1010, 10.1002/jemt.20509 Rizzo, 2006, Optimization of pairings and detection conditions for measurement of FRET between cyan and yellow fluorescent proteins, Microsc Microanal, 12, 238, 10.1017/S1431927606060235 Kennedy, 2008, Fluorescence lifetime imaging using light emitting diodes, J Phys D—Appl Phys, 41, 094012, 10.1088/0022-3727/41/9/094012 Elder, 2006, Calibration of a wide-field frequency-domain fluorescence lifetime microscopy system using light emitting diodes as light sources, J Microsc—Oxford, 224, 166, 10.1111/j.1365-2818.2006.01689.x Esposito, 2007, Optimizing frequency-domain fluorescence lifetime sensing for high-throughput applications: photon economy and acquisition speed, J Opt Soc Am A—Opt Image Sci Vis, 24, 3261, 10.1364/JOSAA.24.003261 Tramier, 2008, Fluorescence anisotropy imaging microscopy for homo-FRET in living cells, vol 85, 395 Kumar, 2007, Multifocal multiphoton excitation and time correlated single photon counting detection for 3-D fluorescence lifetime imaging, Opt Expr, 15, 12548, 10.1364/OE.15.012548 van Munster, 2007, Combination of a spinning disc confocal unit with frequency-domain fluorescence lifetime imaging microscopy, Cytometry Part A, 71A, 207, 10.1002/cyto.a.20379 Grant, 2007, High speed optically sectioned fluorescence lifetime imaging permits study of live cell signaling events, Opt Expr, 15, 15656, 10.1364/OE.15.015656 Esposito, 2007, Unsupervised fluorescence lifetime imaging microscopy for high content and high throughput screening, Mol Cell Proteomics, 6, 1446, 10.1074/mcp.T700006-MCP200 Rück, 2007, SLIM: a new method for molecular imaging, Microsc Res Tech, 70, 485, 10.1002/jemt.20433 Knemeyer, 2007, Spectrally resolved fluorescence lifetime imaging microscopy (SFLIM)—an appropriate method for imaging single molecules in living cells, Anal Bioanal Chem, 387, 37, 10.1007/s00216-006-0762-1 De Beule, 2007, Rapid hyperspectral fluorescence lifetime imaging, Microsc Res Tech, 70, 481, 10.1002/jemt.20434 Becker, 2007, Multispectral fluorescence lifetime imaging by TCSPC, Microsc Res Tech, 70, 403, 10.1002/jemt.20432 Liu, 2006, Simultaneous time- and spectrum-resolved multifocal multiphoton microscopy, Appl Phys B—Lasers Opt, 84, 379, 10.1007/s00340-006-2314-y Qu, 2006, Temporally and spectrally resolved sampling imaging with a specially designed streak camera, Opt Lett, 31, 368, 10.1364/OL.31.000368 Ahmed, 2008, Extracellular point mutations in FGFR2 elicit unexpected changes in intracellular signalling, Biochem J, 413, 37, 10.1042/BJ20071594 Auksorius, 2008, Stimulated emission depletion microscopy with a supercontinuum source and fluorescence lifetime imaging, Opt Lett, 33, 113, 10.1364/OL.33.000113 Elder, 2006, The application of frequency-domain fluorescence lifetime imaging microscopy as a quantitative analytical tool for microfluidic devices, Opt Expr, 14, 5456, 10.1364/OE.14.005456 Robinson, 2008, Three-dimensional molecular mapping in a microfluidic mixing device using fluorescence lifetime imaging, Opt Lett, 33, 1887, 10.1364/OL.33.001887 Treanor, 2006, Microclusters of inhibitory killer immunoglobulin like receptor signaling at natural killer cell immunological synapses, J Cell Biol, 174, 153, 10.1083/jcb.200601108 Parsons, 2008, Quantification of integrin receptor agonism by fluorescence lifetime imaging, J Cell Sci, 121, 265, 10.1242/jcs.018440 Jose, 2007, Photophysics of clomeleon by FLIM: discriminating excited state reactions along neuronal development, Biophys J, 92, 2237, 10.1529/biophysj.106.092841 Jose, 2008, Investigating interactions mediated by the presynaptic protein bassoon in living cells by Foerster's resonance energy transfer and fluorescence lifetime imaging microscopy, Biophys J, 94, 1483, 10.1529/biophysj.107.111674 Kinoshita, 2007, Ternary complex formation of pVHL, elongin B and elongin C visualized in living cells by a fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy technique, FEBS J, 274, 5567, 10.1111/j.1742-4658.2007.06075.x Ganesan, 2006, A dark yellow fluorescent protein (YFP)-based resonance energy-accepting chromoprotein (REACh) for Förster resonance energy transfer with GFP, Proc Natl Acad Sci U S A, 103, 4089, 10.1073/pnas.0509922103 Grant, 2008, Multiplexed FRET to image multiple signaling events in live cells, Biophys J, L69, 10.1529/biophysj.108.139204 Lakowicz, 2006 Birch, 2001, Multiphoton excited fluorescence spectroscopy of biomolecular systems, Spectrochimica Acta Part A—Mol Biomol Spectrosc, 57, 2313, 10.1016/S1386-1425(01)00487-5 Rao, 2007, Trichostatin-A induces differential changes in histone protein dynamics and expression in HeLa cells, Biochem Biophys Res Commun, 363, 263, 10.1016/j.bbrc.2007.08.120 Li, 2007, Probing rotation dynamics of biomolecules using polarization based fluorescence microscopy, Microsc Res Tech, 70, 390, 10.1002/jemt.20418 Cao, 2006, Nuclease resistance of telomere-like oligonucleotides monitored in live cells by fluorescence anisotropy imaging, Anal Chem, 78, 1478, 10.1021/ac0517601 Spitz, 2007, Assessment of cellular actin dynamics by measurement of fluorescence anisotropy, Anal Biochem, 367, 95, 10.1016/j.ab.2007.04.001 Siegel, 2003, Wide-field time-resolved fluorescence anisotropy imaging (TR-FAIM): imaging the rotational mobility of a fluorophore, Rev Sci Instruments, 74, 182, 10.1063/1.1519934 Suhling, 2004, Time-resolved fluorescence anisotropy imaging applied to live cells, Opt Lett, 29, 584, 10.1364/OL.29.000584 Clayton, 2002, Dynamic fluorescence anisotropy imaging microscopy in the frequency domain (rFLIM), Biophys J, 83, 1631, 10.1016/S0006-3495(02)73932-5 Spitz, 2008, Scanning-less wide-field single-photon counting device for fluorescence intensity, lifetime and time-resolved anisotropy imaging microscopy, J Microsc—Oxford, 229, 104, 10.1111/j.1365-2818.2007.01873.x Davey, 2007, Membrane order and molecular dynamics associated with IgE receptor cross-linking in mast cells, Biophys J, 92, 343, 10.1529/biophysj.106.088815 Pu, 2007, Time-resolved fluorescence polarization anisotropy and optical imaging of Cybesin in cancerous and normal prostate tissues, Opt Communications, 274, 260, 10.1016/j.optcom.2007.01.078 Rizzo, 2005, High-contrast imaging of fluorescent protein FRET by fluorescence polarization microscopy, Biophys J, 88, L14, 10.1529/biophysj.104.055442 Chachisvilis, 2006, G protein-coupled receptors sense fluid shear stress in endothelial cells, Proc Natl Acad Sci U S A, 103, 15463, 10.1073/pnas.0607224103 Koushik, 2008, Energy migration alters the fluorescence lifetime of Cerulean: implications for fluorescence lifetime imaging Förster resonance energy transfer measurements, J Biomed Opt, 13, 031204, 10.1117/1.2940367 Squire, 2004, Red-edge anisotropy microscopy enables dynamic imaging of homo-FRET between green fluorescent proteins in cells, J Struct Biol, 147, 62, 10.1016/j.jsb.2003.10.013 Hoffmann, 2008, Prolonged irradiation of enhanced cyan fluorescent protein or Cerulean can invalidate Förster resonance energy transfer measurements, J Biomed Opt, 13, 031205, 10.1117/1.2937829 Sharma, 2004, Nanoscale organization of multiple GPI-anchored proteins in living cell membranes, Cell, 116, 577, 10.1016/S0092-8674(04)00167-9 Bader, 2007, Imaging of protein cluster sizes by means of confocal time-gated fluorescence anisotropy microscopy, Opt Expr, 15, 6934, 10.1364/OE.15.006934 Yeow, 2007, Enumeration of oligomerization states of membrane proteins in living cells by homo-FRET spectroscopy and microscopy: Theory and application, Biophys J, 92, 3098, 10.1529/biophysj.106.099424 Sengupta, 2007, Fluorescence resonance energy transfer between lipid probes detects nanoscopic heterogeneity in the plasma membrane of live cells, Biophys J, 92, 3564, 10.1529/biophysj.106.094730 Smith, 2005, Time-resolved evanescent wave-induced fluorescence anisotropy measurements, 245 Bigelow, 2003, Confocal fluorescence spectroscopy and anisotropy imaging system, Opt Lett, 28, 695, 10.1364/OL.28.000695 Bigelow, 2004, Imaging enzyme activity with polarization-sensitive confocal fluorescence microscopy, J Microsc, 215, 24, 10.1111/j.0022-2720.2004.01357.x Vogel SS, Thaler C, Blank PS, Koushik SV: chapter 10: Time Resolved Fluorescence Anisotropy. In FLIM Microscopy in Biology and Medicine. Edited by Periasamy A, Clegg RM: Taylor & Francis; in press. Ramadass, 2008, How DASPMI Reveals Mitochondrial Membrane Potential: Fluorescence Decay Kinetics and Steady-State Anisotropy in Living Cells, Biophys J, 95, 4068, 10.1529/biophysj.108.135079 Benninger, 2009, Live Cell Linear Dichroism Imaging Reveals Extensive Membrane Ruffling within the Docking Structure of Natural Killer Cell Immune Synapses, Biophys J, 96, L13, 10.1016/j.bpj.2008.10.005 Niclass, 2008, A 128×128 Single-Photon Image Sensor With Column-Level 10-Bit Time-to-Digital Converter Array, IEEE Journal of Solid State Circuits, 43, 2977, 10.1109/JSSC.2008.2006445 Piston DW, Rizzo MA: FRET by Fluorescence Polarization Microscopy. In Fluorescent Proteins, edn 2. Edited by Sullivan KF. Methods in Cell Biology. 2008:415–430. Barber, 2009, Multiphoton time-domain fluorescence lifetime imaging microscopy: practical application to protein–protein interactions using global analysis, J. R. Soc. Interface, 6, S93, 10.1098/rsif.2008.0451.focus