Nowcasting and forecasting the potential domestic and international spread of the 2019-nCoV outbreak originating in Wuhan, China: a modelling study

Lloyd-Smith, 2005, Superspreading and the effect of individual variation on disease emergence, Nature, 438, 355, 10.1038/nature04153 Chowell, 2004, Model parameters and outbreak control for SARS, Emerg Infect Dis, 10, 1258, 10.3201/eid1007.030647 Riley, 2003, Transmission dynamics of the etiological agent of SARS in Hong Kong: impact of public health interventions, Science, 300, 1961, 10.1126/science.1086478 Lipsitch, 2003, Transmission dynamics and control of severe acute respiratory syndrome, Science, 300, 1966, 10.1126/science.1086616 Chowell, 2015, Transmission characteristics of MERS and SARS in the healthcare setting: a comparative study, BMC Med, 13, 210, 10.1186/s12916-015-0450-0 Kucharski, 2015, The role of superspreading in Middle East respiratory syndrome coronavirus (MERS-CoV) transmission, Euro Surveill, 20, 14, 10.2807/1560-7917.ES2015.20.25.21167 Cauchemez, 2016, Unraveling the drivers of MERS-CoV transmission, Proc Natl Acad Sci USA, 113, 9081, 10.1073/pnas.1519235113 Park, 2018, MERS transmission and risk factors: a systematic review, BMC Public Health, 18, 574, 10.1186/s12889-018-5484-8 Walsh, 2013, Clinical impact of human coronaviruses 229E and OC43 infection in diverse adult populations, J Infect Dis, 208, 1634, 10.1093/infdis/jit393 Zhang, 2018, Epidemiology characteristics of human coronaviruses in patients with respiratory infection symptoms and phylogenetic analysis of HCoV-OC43 during 2010-2015 in Guangzhou, PLoS One, 13, e0191789, 10.1371/journal.pone.0191789 Gaunt, 2010, Epidemiology and clinical presentations of the four human coronaviruses 229E, HKU1, NL63, and OC43 detected over 3 years using a novel multiplex real-time PCR method, J Clin Microbiol, 48, 2940, 10.1128/JCM.00636-10 Leung, 2004, The epidemiology of severe acute respiratory syndrome in the 2003 Hong Kong epidemic: an analysis of all 1755 patients, Ann Intern Med, 141, 662, 10.7326/0003-4819-141-9-200411020-00006 Lau, 2010, A comparative epidemiologic analysis of SARS in Hong Kong, Beijing and Taiwan, BMC Infect Dis, 10, 50, 10.1186/1471-2334-10-50 Virlogeux, 2016, Comparison of incubation period distribution of human infections with MERS-CoV in South Korea and Saudi Arabia, Sci Rep, 6, 35839, 10.1038/srep35839 Vijgen, 2005, Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event, J Virol, 79, 1595, 10.1128/JVI.79.3.1595-1604.2005 Lessler, 2009, Incubation periods of acute respiratory viral infections: a systematic review, Lancet Infect Dis, 9, 291, 10.1016/S1473-3099(09)70069-6 Mason, 2010 Cowling, 2015, Preliminary epidemiological assessment of MERS-CoV outbreak in South Korea, May to June 2015, Euro Surveill, 20, 7, 10.2807/1560-7917.ES2015.20.25.21163 Leung, 2006, Seroprevalence of IgG antibodies to SARS-coronavirus in asymptomatic or subclinical population groups, Epidemiol Infect, 134, 211, 10.1017/S0950268805004826 Al Kahlout, 2019, Comparative serological study for the prevalence of anti-MERS coronavirus antibodies in high-and low-risk groups in Qatar, J Immunol Res, 10.1155/2019/1386740 Abbad, 2019, Middle East respiratory syndrome coronavirus (MERS-CoV) neutralising antibodies in a high-risk human population, Morocco, November 2017 to January 2018, Euro Surveill, 24, 1900244, 10.2807/1560-7917.ES.2019.24.48.1900244 Gill, 1994, Development and application of an enzyme immunoassay for coronavirus OC43 antibody in acute respiratory illness, J Clin Microbiol, 32, 2372, 10.1128/jcm.32.10.2372-2376.1994 Chan, 2009, Examination of seroprevalence of coronavirus HKU1 infection with S protein-based ELISA and neutralization assay against viral spike pseudotyped virus, J Clin Virol, 45, 54, 10.1016/j.jcv.2009.02.011 Oh, 2018, Middle East respiratory syndrome: what we learned from the 2015 outbreak in the Republic of Korea, Korean J Intern Med, 33, 233, 10.3904/kjim.2018.031 Patrick, 2006, An outbreak of human coronavirus OC43 infection and serological cross-reactivity with SARS coronavirus, Can J Infect Dis Med Microbiol, 17, 330, 10.1155/2006/152612 Matsuno, 2019, Human coronavirus alone or in co-infection with rhinovirus C is a risk factor for severe respiratory disease and admission to the pediatric intensive care unit: a one-year study in Southeast Brazil, PLoS One, 14, e0217744, 10.1371/journal.pone.0217744 Jia, 2009, Case fatality of SARS in mainland China and associated risk factors, Trop Med Int Health, 14, 21, 10.1111/j.1365-3156.2008.02147.x Breban, 2013, Interhuman transmissibility of Middle East respiratory syndrome coronavirus: estimation of pandemic risk, Lancet, 382, 694, 10.1016/S0140-6736(13)61492-0 Cauchemez, 2014, Middle East respiratory syndrome coronavirus: quantification of the extent of the epidemic, surveillance biases, and transmissibility, Lancet Infect Dis, 14, 50, 10.1016/S1473-3099(13)70304-9 Hung, 2003, The SARS epidemic in Hong Kong: what lessons have we learned?, J R Soc Med, 96, 374, 10.1177/014107680309600803 McDonald, 2004, SARS in healthcare facilities, Toronto and Taiwan, Emerg Infect Dis, 10, 777, 10.3201/eid1005.030791 Li, 2020, An outbreak of NCIP (2019-nCoV) infection in China—Wuhan, Hubei Province, 2019–2020, China CDC Weekly, 2, 79, 10.46234/ccdcw2020.022 Li, 2020, Early transmission dynamics in Wuhan, China, of novel coronavirus-infected pneumonia, N Engl J Med, 10.1056/NEJMoa2001316 Wang, 2018, Characterizing the dynamics underlying global spread of epidemics, Nat Commun, 9, 218, 10.1038/s41467-017-02344-z Bootsma, 2007, The effect of public health measures on the 1918 influenza pandemic in U.S. cities, Proc Natl Acad Sci USA, 104, 7588, 10.1073/pnas.0611071104 Diekmann, 2000 Desai, 2019, Real-time epidemic forecasting: challenges and opportunities, Health Secur, 17, 268, 10.1089/hs.2019.0022 Polonsky, 2019, Outbreak analytics: a developing data science for informing the response to emerging pathogens, Philos Trans R Soc Lond B Biol Sci, 374, 20180276, 10.1098/rstb.2018.0276 Lipsitch, 2011, Improving the evidence base for decision making during a pandemic: the example of 2009 influenza A/H1N1, Biosecur Bioterror, 9, 89 Imai Read, 2020, Novel coronavirus 2019-nCoV: early estimation of epidemiological parameters and epidemic predictions, medRxiv Liu, 2020, Transmission dynamics of 2019 novel coronavirus (2019-nCoV), bioRxiv Zhao, 2020, Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: a data-driven analysis in the early phase of the outbreak, bioRxiv