Evolutionary relationships among proteins in the phytohemagglutinin-arcelin-α-amylase inhibitor family of the common bean and its relatives

Plant Molecular Biology - Tập 26 - Trang 1103-1113 - 1994
T. Erik Mirkov1, Janice M. Wahlstrom2, Kiyoshi Hagiwara1, Flavio Finardi-Filho2, Susanne Kjemtrup1, Maarten J. Chrispeels1
1Department of Biology, University of California, San Diego, La Jolla, USA
2Department of Biology, University of California-San Diego, La Jolla, USA

Tóm tắt

The common bean, Phaseolus vulgaris, contains a family of defense proteins that comprises phytohemagglutinin (PHA), arcelin, and α-amylase inhibitor (αAI). Here we report eight new derived amino acid sequences of genes in this family obtained with either the polymerase chain reaction using genomic DNA, or by screening cDNA libraries made with RNA from developing beans. These new sequences are: two αAI sequences and arcelin-4 obtained from a wild accession of P. vulgaris that is resistant to the Mexican bean weevil (Zabrotes subfasciatus) and the bean weevil (Acanthoscelides obtectus); an αAI sequence from the related species P. acutifolius (tepary bean); a PHA and an arcelin-like sequence from P. acutifolius; an αAI-like sequence from P. maculatus; and a PHA sequence from an arcelin-5 type P. vulgaris. A dendrogram of 16 sequences shows that they fall into the three identified groups: phytohemagglutinins, arcelins and αAIs. A comparison of these derived amino acid sequences indicates that one of the four amino acid residues that is conserved in all legume lectins and is required for carbohydrate binding is absent from all the arcelins; two of the four conserved residues needed for carbohydrate binding are missing from all the αAIs. Proteolytic processing at an Asn-Ser site is required for the activation of αAI, and this site is present in all αAI-like sequences; this processing site is also found at the same position in certain arcelins, which are not proteolytically processed. The presence of this site is therefore not sufficient for processing to occur.

Tài liệu tham khảo

Altabella T, Palazon J, Ibarz E, Pinol MT, Serrano R: Effect of auxin concentration and growth phase on the plasma membrane H+-ATPase of tobacco calli. Plant Sci 70: 209–214 (1990). Bernfeld P: Amylases, α and β. In: Colowick SP, Kaplan NO (eds) Methods in Enzymology, vol. 1, pp. 149–158. Academic Press, New York (1955). Cardona C, Kornegay J, Posso CE, Morales F, Ramirez H: Comparative value of four arcelin variants in the development of dry bean lines resistant to the Mexican bean weevil. Entomol Exp Appl 56: 197–206 (1990). Ceriotti A, Vitale A, Bollini R: Lectin-like proteins accumulate as fragmentation products in bean seed protein bodies. FEBS Lett 250: 157–160 (1989). Chrispeels MJ, Raikhel NV: Lectins, lectin genes and their role in plant defense. Plant Cell 3: 1–19 (1991). De Mejia EG, Hankins CN, Paredes-Lopez O, Shannon LM: The lectins and lectin-like proteins of tepary beans (Phaseolus acutifolius) and tepary-common bean (Phaseolus vulgaris) hybrids. J Food Biochem 14: 117–126 (1990). Dellaporta S, Wood J, Hicks JB: A plant DNA minipreparation: Version II. Plant Mol Biol Rep 1: 19–21 (1983). Devereux J, Haeberli P, Smithies O: A comprehensive set of sequence analysis programs for the VAX. Nucl Acids Res 12: 387–395 (1984). Dunsmuir P, Bond D, Lee K, Gidoni D, Townsend J: Stability of introduced genes and stability in expression. In: Gelvin SB, Schilperoort RA, Verma DPS (eds) Plant Molecular Biology Manual, pp. C1/1-C1/4. Kluwer Academic Publishers, Dodrecht, Netherlands (1988). Goossens A, Geremia R, Van Montagu M, Angenon G: Analysis of arcelin 5 protein and cDNA clones. In: Roca WM (ed) Proceedings of the Bean Advanced Research Network Workshop (CIAT, Cali, Colombia), in press (1994). Hartweck LM, Vogelzang RD, Osborn TC: Characterization and comparison of arcelin seed protein variants from common bean. Plant Physiol 97: 204–211 (1991). Hoffinan LM, Donaldson DD: Characterization of two Phaseolus vulgaris phytohemagglutinin genes closely linked on the chromosome. EMBO J 4: 883–889 (1985). Hoffman LM, Ma Y, Barker RF: Molecular cloning of Phaseolus vulgaris lectin mRNA and use of cDNA as a probe to estimate lectin transcripts levels in various tissues. Nucl Acids Res 10: 7819–7828 (1982). Iguti AM, Lajolo FM: Occurrence and purification of α-amylase isoinhibitors in bean (Phaseolus vulgaris L) varieties. J Agric Food Chem 39: 2131–2136 (1991). Imbrie-Milligan C, Datta P, Goldstein IJ: Isolation and characterization of a cDNA clone encoding the lima bean lectin. J Biol Chem 264: 16793–16797 (1989). Ishimoto M, Kitamura K: Growth inhibitory effects of an α-amylase inhibitor from kidney bean, Phaseolus vulgaris (L.) on three species of bruchids (Coleoptera: Bruchidae). Appl Ent Zool 24: 281–286 (1989). John ME, Long CM: Sequence analysis of arcelin 2, a lectin-like plant protein. Gene 86: 171–176 (1990). Jordan ET, Goldstein IJ: The sequence of a second member of the lima bean lectin gene family and the expression and characterization of recombinant lectin in Escherichia coli. J Biol Chem 269: 7674–7681 (1994). Kornegay JL, Cardona C: Inheritance of resistance to Acanthoscelides obtectus in a wild common bean accession crossed to commercial bean cultivars. Euphytica 52: 103–111 (1991). Lapeyre B, Amalric F: A powerful method for the preparation of cDNA libraries: isolation of cDNA encoding a 100-kDal nucleolar protein. Gene 37: 215–220 (1985). Lowry OH, Rosebrough NJ, Farr AL, Randall RJ: Protein measurement with the Folin phenol reagent. J Biol Chem 193: 265–275 (1951). Minney BHP, Gatehouse AMR, Dobie P, Dendy J, Cardona C, Gatehouse JA: Biochemical bases of seed resistance to Zabrotes subfasciatus (bean weevil) in Phaseolus vulgaris (common bean); a mechanism for arcelin toxicity. J Insect Physiol 36: 757–767 (1990). Mirkov TE, Chrispeels MJ: Mutation of Asn128 to Asp of Phaseolus vulgaris leucoagglutinin (PHA-L) eliminates carbohydrate binding and biological activity. Glycobiology 3: 581–587 (1993). Mirkov TE, Pueyo JJ, Mayer J, Kjemtrup S, Cardona C, Chrispeels MJ: Molecular and functional analysis of α-amylase inhibitor genes and proteins in the common bean Phaseolus vulgaris. In: Roca WM (ed) Proceedings of the Bean Advanced Research Network Workshop (CIAT, Cali, Colombia), in press (1994). Moreno J, Altabella T, Chrispeels MJ: Characterization of α-amylase-inhibitor, a lectin-like protein in the seeds of Phaseolus vulgaris. Plant Physiol 92: 703–709 (1990). Moreno J, Chrispeels MJ: A lectin gene encodes the α-amylase inhibitor of the common bean. Proc Natl Acad Sci USA 86: 7885–7889 (1989). Muramatsu M, Fukazawa C: A high-order structure of plant storage proprotein allows its 2nd conversion by an asparagine-specific cysteine protease, a novel proteolytic enzyme. Eur J Biochem 215: 123–132 (1993). Needleman SB, Wunsch CD: A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 48: 443–453 (1970). Nodari RO, Tsai SM, Gilbertson RL, Gepts P: Towards an integrated linkage map of common bean. 2. Development of an RFLP-based linkage map. Theor Appl Genet 85: 513–520 (1993). Osborn TC, Alexander DC, Sun SSM, Cardona C, Bliss FA: Insecticidal activity and lectin homology of arcelin seed protein. Science 240: 207–210 (1988). Osborn TC, Burow M, Bliss FA: Purification and characterization of arcelin seed protein from common bean. Plant Physiol 86: 399–405 (1988). Powers JR, Culbertson JD: Interaction of a purified bean (Phaseolus vulgaris) glycoprotein with an insect amylase. Cereal Chem 60: 427–429 (1983). Powers JR, Whitaker JR: Effect of several experimental parameters on combination of red kidney bean (Phaseolus vulgaris) α-amylase inhibitor with porcine pancreatic α-amylase. J Food Biochem 1: 239–260 (1977). Pratt RC, Singh NK, Shade RE, Murdock LL, Bressan RA: Isolation and partial characterization of a seed lectin from tepary bean that delays bruchid beetle development. Plant Physiol 93: 1453–1459 (1990). Pueyo JJ, Hunt DC, Chrispeels MJ: Activation of bean α-amylase inhibitor requires proteolytic processing of the pro-protein. Plant Physiol 101: 1341–1348 (1993). Pusztai A: Dietary lectins are metabolic signals for the gut and modulate immune and hormone functions. Eur J Clin Nutr 47: 691–699 (1993). Pusztai A, Watt WB, Stewart JC: Erythro- and lymphoagglutinins of Phaseolus acutifolius. Phytochemistry 26: 1009–1013 (1987). Rougé P, Barre A, Causse H, Chatelain C, Porthé G: Arcelin and α-amylase inhibitor from the seeds of common bean (Phaseolus vulgaris) are truncated lectins. Biochem System Ecol 21: 695–703 (1993). Scott MP, Jung R, Muntz K, Nielsen NC: A protease responsible for post-translational cleavage of a conserved Asn-Gly linkage in glycinin, the major seed storage protein of soybean. Proc Natl Acad Sci USA 89: 658–662 (1992). Shade RE, Schroeder HE, Pueyo JJ, Tabe LM, Murdock LL, Higgins TJV, Chrispeels MJ: Transgenic pea seeds expressing the α-amylase inhibitor of the common bean are resistant to bruchid beetles. Bio/technology 12: 793–796 (1994). Sharon N, Lis H: Legume lectins—a large family of homologous proteins. FASEB J 4: 3198–3208 (1990). Suzuki K, Ishimoto M, Kikuchi F, Kitamura K: Growth inhibitory effect of an α-amylase inhibitor from the wild common bean resistant to the Mexican bean weevil (Zabrotes subfasciatus). Japan J Breed 43: 257–265 (1993). Suzuki K, Ishimoto M, Kitamura K: cDNA sequence and deduced primary structure of an α-amylase inhibitor from a bruchid-resistant wild common bean. Biochim Biophys Acta 1206: 289–291 (1994). Van Eijsden RR, De Pater BS, Kijne JW: Mutational analysis of the sugar-binding site of pea lectin. Glycoconj J, in press (1994). Voelker T, Sturm A, Chrispeels MJ: Differences in expression between two seed lectin alleles obtained from normal and lectin-deficient beans are maintained in transgenic tobacco. EMBO J 6: 3571–3577 (1987). Yamaguchi H: Isolation and characterization of the subunits of Phaseolus vulgaris α-amylase inhibitor. J Biochem 110: 785–789 (1991).