Relationship between antibiotic resistance genes and metals in residential soil samples from Western Australia

Springer Science and Business Media LLC - Tập 24 Số 3 - Trang 2484-2494 - 2017
Charles W. Knapp1, Anna Callan2, Beatrice Aitken1, Rylan Shearn3, Annette Koenders3, Andrea Hinwood3
1Department of Civil & Environmental Engineering, University of Strathclyde, Glasgow, Scotland G1 1XJ, UK
2School of Medical and Health Sciences, Edith Cowan University, Joondalup, WA, 6027, Australia
3Centre for Ecosystem Management, Edith Cowan University, Joondalup, WA, 6027, Australia

Tóm tắt

Từ khóa


Tài liệu tham khảo

Abella J, Fahy A, Duran R, Cagnon C (2015) Integron diversity in bacterial communities of freshwater sediments at different contamination levels. FEMS Microbiol Ecol 91: fiv140

Alonso A, Sanchez P, Martinez JL (2001) Environmental selection of antibiotic resistance genes. Environ Microbiol 3:1–9

Ashbolt NJ, Amezquita A, Backhaus T, Borriello P, Brandt KK, Collignon P, Coors A, Finley R, Gaze WH, Heberer T, Lawrence JR, Larsson DGJ, McEwan SA, Ryan JJ, Schönfeld J, Silley P, Snape JR, Van den Eede C, Topp E (2013) Human health risk assessment (HHRA) for environmental development and transfer of antibiotic resistance. Environ Health Perspect 121:993–1001

Australian Institute of Health and Welfare (2004) Rural, regional and remote health: a guide to remoteness classifications http://www.aihw.gov.au/WorkArea/DownloadAsset.aspx?id=6442459567 . Last accessed 04 August 2016.

Baker-Austin C, Wright MS, Stepanauskas R, McArthur JV (2006) Co-selection of antibiotic and metal resistance. Trends Microbiol 14:176–182

Bass L, Liebert CA, Lee MD, Summers AO, White DG, Thayer SG, Maurer JJ (1999) Incidence and characterization of integrons, genetic elements mediating multiple-drug resistance, in avian Escherichia coli. Antimicrob Agents Chemother 43:2925–2929

Beaber JW, Hochhut B, Waldor MK (2004) SOS response promotes horizontal dissemination of antibiotic resistance genes. Nature 427:72–74

Berendock TU, Manaia CM, Merlin C, Fatta-Kassinos D, Cytryn E, Walsh F, Bürgmann H, Sørum H, Norström M, Pons M-N, Kruenzinger N, Huovinen P, Stefani S, Schwartz T, Kisand V, Baquero F, Martinez JL (2015) Tackling antibiotic resistance: the environmental framework. Nat Rev Microbiol 13:310–317

Berg J, Thorsen MK, Holm PE, Jensen J, Nybroe O, Brandt KK (2010) Cu exposure under field conditions coselects for antibiotic resistance as determined by a novel cultivation-independent bacterial community tolerance assay. Environ Sci Technol 44:8724–8728

Berg J, Tom-Petersen A, Nybroe O (2005) Copper amendment of agricultural soil selects for bacterial antibiotic resistance in the field. Lett Appl Microbiol 40:146–151

Bernier SP, Surette MG (2013) Concentration-dependent activity of antibiotics in natural environments. Front Microbiol 4

Callan AC, Hinwood AL, Ramalingam M, Boyce M, Heyworth J, McCafferty P, Odland JO (2013) Maternal exposure to metals-concentrations and predictors of exposure. Environ Res 126:111–117

Canton R (2009) Antibiotic resistance genes from the environment: a perspective through newly identified antibiotic resistance mechanisms in the clinical setting. Clin Microbiol Infect 15:20–25

Davies J, Davies D (2010) Origins and evolution of antibiotic resistance. Microbiol Mol Biol Rev 74:417–433

Day PR (1965) Particle fractionation and particle-size analysis. In: Black CA (ed) Methods of soil analysis, part 1. American Society of Agronomy, Madison, WI, pp. 545–567

Dhakephalkar PK, Chopade BA (1994) High-levels of multiple metal resistance and its correlation to antibiotic-resistance in environmental isolates of Acinetobacter. Biometals 7:67–74

Dorn-In S, Bassitta R, Schwaiger K, Bauer J, Hölzel CS (2015) Specific amplification of bacterial DNA by optimized so-called universal bacterial primers in samples rich of plant DNA. J Microbiol Methods 113:50–56

Fraser WR (1971) Some features of antibiotic resistance in Staphylococci: mercury resistance and multiple antibiotic resistance. Proc Roy Soc Med 64:540–544

Ghosh A, Singh A, Ramteke PW, Singh VP (2000) Characterization of large plasmids encoding resistance to toxic heavy metals in Salmonella abortus equi. Biochem Biophys Res Commun 272:6–11

Graham DW, Olivares-Rieumont S, Knapp CW, Lima L, Werner D, Bowen E (2011) Antibiotic resistance gene abundances associated with waste discharges to the Almendares River near Havana, Cuba. Environ Sci Technol 45:418–424

Guo XC, Liu S, Wang Z, Zhang XX, Li M, Wu B (2014) Metagenomic profiles and antibiotic resistance genes in gut microbiota of mice exposed to arsenic and iron. Chemosphere 112:1–8

Hasman H, Aarestrup FM (2005) Relationship between copper, glycopeptide, and macrolide resistance among Enterococcus faecium strains isolated from pigs in Denmark between 1997 and 2003. Antimicrob Agents Chemother 49:454–456

Hinwood AL, Callan AC, Ramalingam M, Boyce M, Heyworth J, McCafferty P, Odland JO (2013) Cadmium, lead and mercury exposure in non-smoking pregnant women. Environ Res 126:118–124

Hölzel CS, Muller C, Harms KS, Mikolajewski S, Schafer S, Schwaiger K, Bauer J (2012) Heavy metals in liquid pig manure in light of bacterial antimicrobial resistance. Environ Res 113:21–27

Hu HW, Wang JT, Li J, Li JJ, Ma YB, Chen D, He JZ (2016) Field-based evidence for copper contamination induced changes of antibiotic resistance in agicultural soils. Environ Microbiol. doi: 10.1111/1462-2920.13370

Ji XL, Shen QH, Liu F, Ma J, Xu G, Wang YL, Wu MH (2012) Antibiotic resistance gene abundances associated with antibiotics and heavy metals in animal manures and agricultural soils adjacent to feedlots in Shanghai, China. J Hazard Mater 235:178–185

Knapp CW, Dolfing J, Ehlert PAI, Graham DW (2010) Evidence of increasing antibiotic resistance gene abundances in archived soils since 1940. Environ Sci Technol 44:580–587

Knapp CW, Lima L, Olivares-Rieumont S, Bowen E, Werner D, Graham DW (2012) Seasonal variations in antibiotic resistance gene transport in the Almendares River, Havana. Cuba Front Microbiol 3

Knapp CW, McCluskey SM, Singh BK, Campbell CD, Hudson G, Graham DW (2011) Antibiotic resistance gene abundances correlate with metal and geochemical conditions in archived scottish soils PLoS One 6

Li J, Ma YB, Hu HW, Wang JT, Liu YR, He JZ (2015) Field-based evidence for consistent responses of bacterial communities to copper contamination in two contrasting agricultural soils. Front Microbiol 6:31

Marques AM, Congregado F, Simonpujol DM (1979) Antibiotic and heavy-metal resistance of Pseudomonas aeruginosa isolated from soils. J Appl Bacteriol 47:347–350

Martinez JL (2008) Antibiotics and antibiotic resistance genes in natural environments. Science 321:365–367

Martinez JL (2009) Environmental pollution by antibiotics and by antibiotic resistance determinants. Environ Pollut 157:2893–2902

McLaughlin MJ, Lofts S, Warne M, Amorim MJB, Fairbrother A, Lanno R, Hendershot W, Schelkat CE, Ma Y, Paton GJ (2010) Derivation of ecological based soil standards for trace elements. In: Merrington G, Schoeters I (eds) Soil quality standards. SETAC Press, Pensacola, FL

NEPC (1999) National Environment Protection (Assessment of Contaminated Land) Measure 1999. Schedule B (7a) Guideline on Health Investigation Levels. National Environment Protection Council.

Ng LK, Martin I, Alfa M, Mulvey M (2001) Multiplex PCR for the detection of tetracycline resistant genes. Mol Cell Probes 15:209–215

Nisanian M, Holladay SD, Karpuzoglu E, Kerr RP, Williams SM, Stabler L, Vaun McArthur J, Tuckfield RC, Gogal RM Jr (2014) Exposure of juvenile Leghorn chickens to lead acetate enhances antibiotic resistance in enteric bacterial flora. Poult Sci 93:891–897

Palm GJ, Lederer T, Orth P, Saenger W, Takahashi M, Hillen W, Hinrichs W (2008) Specific binding of divalent metal ions to tetracycline and to the tet repressor/tetracycline complex. J Biol Inorg Chem 13:1097–1110

Peak N, Knapp CW, Yang RK, Hanfelt MM, Smith MS, Aga DS, Graham DW (2007) Abundance of six tetracycline resistance genes in wastewater lagoons at cattle feedlots with different antibiotic use strategies. Environ Microbiol 9:143–151

Pei RT, Kim SC, Carlson KH, Pruden A (2006) Effect of river landscape on the sediment concentrations of antibiotics and corresponding antibiotic resistance genes (ARG). Water Res 40:2427–2435

Peltier E, Vincent J, Finn C, Graham DW (2010) Zinc-induced antibiotic resistance in activated sludge bioreactors. Water Res 44:3829–3836

Perry J, Wright G (2013) The antibiotic resistance "mobilome": searching for the link between environment and clinic. Front Microbiol 4:138

Pruden A, Pei RT, Storteboom H, Carlson KH (2006) Antibiotic resistance genes as emerging contaminants: studies in northern Colorado. Environ Sci Technol 40:7445–7450

Richmond MH, Parker M, Jevons MP, John M (1964) High penicillinase production correlated with mulitiple antibiotic resistance in Staphylococcus aureus. Lancet: 293–296

Rhoades JD (1982) Soluble salts, methods of soil analysis, part 2. Chemical and Microbiological Properties. American Society of Agronomy Monograph No. 9, 2nd ed.

Roberts M (2012) Acquired tetracycline resistance genes. In: Dougherty T, Pucci M (Eds.), Antibiotic Discovery and Development, pp 543–568

Schollenberger CJ (1945) Determination of soil organic matter. Soil Sci 59:53–56

Schulte EE, Hopkins BG (1996) Estimation of soil organic matter by weight loss-on-ignition. pp 21–31

Seiler C, Berendonk TU (2012) Heavy metal driven co-selection of antibiotic resistance in soil and water bodies impacted by agriculture and aquaculture Front Microbiol 3

Shlaes DM (2010) Antibiotics. The Perfect Storm, Springer, Dordrecht

Sheldrick BH, Wang C (1993) Soil sampling and methods of analysis. Canadian Society of Soil Science. Lewis Publishers, Ann Arbor

Smith MS, Yang RK, Knapp CW, Niu YF, Peak N, Hanfelt MM, Galland JC, Graham DW (2004) Quantification of tetracycline resistance genes in feedlot lagoons by real-time PCR. Appl Environ Microbiol 70:7372–7377

Stepanauskas R, Glenn TC, Jagoe CH, Tuckfield RC, Lindell AH, King CJ, McArthur JV (2006) Coselection for microbial resistance to metals and antibiotics in freshwater microcosms. Environ Microbiol 8:1510–1514

Stepanauskas R, Glenn TC, Jagoe CH, Tuckfield RC, Lindell AH, McArthur JV (2005) Elevated microbial tolerance to metals and antibiotics in metal-contaminated industrial environments. Environ Sci Technol 39:3671–3678

Su JQ, Wei B, Ou-Yang WY, Huang FY, Zhao Y, Xu HJ, Zhu Y-G (2015) Antibiotic resistome and its association with bacterial communities during sewage sludge composting. Environ Sci Technol 49:7356–7363

Tenover FC (2006) Mechanisms of antimicrobial resistance in bacteria. Amer J Infect Cont 34:S3–S10

Timoney JF, Port J, Giles J, Spanier J (1978) Heavy-metal and antibiotic resistance in bacterial flora of sediments of New York bight. Appl Environ Microbiol 36:465–472

USEPA (2002) Method 3050B. Acid Digestion of Sediment, Sludges and Soils. US Environmental Protection Agency, Washington DC

Van Reeuwijk LP (2002) Procedures for soil analysis (6th edition). International Soil Reference and Information Centre, Food and Agriculture Organisation of the United Nations

WHO (2014) Global Report on Surveillance. World Health Organisation.

Wright MS, Peltier GL, Stepanauskas R, McArthur JV (2006) Bacterial tolerances to metals and antibiotics in metal-contaminated and reference streams. FEMS Microbiol Ecol 58:293–302

Yamaguchi A, Udagawa T, Sawai T (1990) Transport of divalent cations with tetracycline as mediated by the transposon Tn10-encoded tetracycline resistance protein. J Biol Chem 265:4809–4813

Zhu Y-G, Johnson TA, Su JQ, Qiao M, Guo GX, Stedfeld RD, Hashsham SA, Tiedje JM (2013) Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc Natl Acad Sci U S A 110:3435–3344